KEGG   Danio rerio (zebrafish): 394243
Entry
394243            CDS       T01004                                 
Symbol
arpc1a
Name
(RefSeq) actin-related protein 2/3 complex subunit 1A
  KO
K05757  actin related protein 2/3 complex, subunit 1A/1B
Organism
dre  Danio rerio (zebrafish)
Pathway
dre04144  Endocytosis
dre04530  Tight junction
dre04810  Regulation of actin cytoskeleton
dre05132  Salmonella infection
Brite
KEGG Orthology (KO) [BR:dre00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    394243 (arpc1a)
  09144 Cellular community - eukaryotes
   04530 Tight junction
    394243 (arpc1a)
  09142 Cell motility
   04810 Regulation of actin cytoskeleton
    394243 (arpc1a)
 09160 Human Diseases
  09171 Infectious disease: bacterial
   05132 Salmonella infection
    394243 (arpc1a)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:dre04131]
    394243 (arpc1a)
  09183 Protein families: signaling and cellular processes
   04812 Cytoskeleton proteins [BR:dre04812]
    394243 (arpc1a)
Membrane trafficking [BR:dre04131]
 Others
  Actin-binding proteins
   Arp2/3 complex
    394243 (arpc1a)
Cytoskeleton proteins [BR:dre04812]
 Eukaryotic cytoskeleton proteins
  Actin filaments / Microfilaments
   Actin-binding proteins
    Arp2/3 complex
     394243 (arpc1a)
SSDB
Motif
Pfam: WD40 ANAPC4_WD40 Rax2 RMC1_N SH3_3 LytB_SH3
Other DBs
NCBI-GeneID: 394243
NCBI-ProteinID: NP_958500
ZFIN: ZDB-GENE-040116-1
Ensembl: ENSDARG00000008383
UniProt: Q7ZUQ0
Position
3:40796111..40804455
AA seq 370 aa
MSLHQFLLEPITCHAWNRDRTQIAISPNNHEVHIYKKSGNQWVKVHELKEHNGHITGIDW
APKSDRIVTCGADRNAYVWSQKDGVWKPTLVILRINRAATFVKWSPLENKFAVGSGARLI
SVCYFESENDWWVSKHIKKPIRSTVLSLDWHPNNVLLAAGSCDFKCRVFSAYIKEVDEKP
APTPWGSKMPFGQVMTEFGGAGSGGWVHSVCFSASGNRLAWVSHDSTVTVVDPTISSTPS
QLKTEFLALLSVTFVSENNIVAAGHDCCPMLFSFDDGGTLTFTSKLDIPKQSIQRNISAM
ERFRNMDKRATTEDRNSTLETLHQNSITQVSIYEGDKRDCRKFCTTGIDGAMTIWDFKTL
ESSIQGLRIM
NT seq 1113 nt   +upstreamnt  +downstreamnt
atgtcacttcaccagtttttgttggaacccatcacctgccacgcatggaaccgggacagg
acccaaattgctatcagcccaaacaaccacgaagtccatatatacaagaaaagtggaaat
cagtgggtgaaagttcatgaattaaaagaacacaatgggcacatcacaggcattgactgg
gctcctaaaagtgatcgtattgtgacctgtggagcggaccgaaatgcttatgtatggagt
caaaaggacggcgtgtggaaacccacccttgttattctcaggatcaaccgtgctgccacg
tttgtgaaatggtctcctctggagaacaaatttgcagtggggagtggagctcgactcata
tccgtttgctactttgagtctgaaaatgattggtgggttagtaaacacatcaaaaagccc
atccgttcaactgtcctcagtttagactggcatccaaataatgtgcttctggcagctggg
tcatgtgacttcaaatgcagggtgttctctgcatacatcaaggaggtggatgagaaacca
gctccaaccccgtggggttccaaaatgccctttgggcaggtgatgacagagtttggtggg
gcgggaagtggaggttgggttcacagcgtctgtttctctgccagtggaaacagattggct
tgggtcagccatgacagtactgtcactgtagtggaccccacaataagctcaacgccgagt
cagctgaaaaccgaattccttgctcttctgagtgtaacttttgtttctgagaacaacatt
gtggcagcgggtcacgactgctgccctatgctgttcagttttgatgatggtggaaccttg
accttcacctccaagttggacattccaaagcaaagcatccagcgcaacatttctgccatg
gagcgctttcgtaacatggacaagagggccaccactgaggaccgcaatagcaccctagaa
accctgcatcagaacagcatcacccaagtgtctatatatgaaggagacaaaagagattgt
cgcaaattctgcactacaggaattgacggagcaatgaccatatgggatttcaagacctta
gagtcttcaatccagggcctgcggatcatgtaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (4)   
   KEGG PATHWAY (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (14)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   Ensembl (1)   
   OC (1)   
   ZFIN (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
Protein domain (6)   
   Pfam (6)   
All databases (37)   

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