KEGG   ENZYME: 4.2.3.205
Entry
EC 4.2.3.205                Enzyme                                 
Name
sodorifen synthase;
sodD (gene name)
Class
Lyases;
Carbon-oxygen lyases;
Acting on phosphates
Sysname
pre-sodorifen diphosphate-lyase [sodorifen-forming]
Reaction(IUBMB)
pre-sodorifen diphosphate = sodorifen + diphosphate [RN:R12490]
Reaction(KEGG)
R12490
Substrate
pre-sodorifen diphosphate [CPD:C22209]
Product
sodorifen [CPD:C22208];
diphosphate [CPD:C00013]
Comment
The enzyme has been characterized from the bacterium Serratia plymuthica.
History
EC 4.2.3.205 created 2019
Orthology
K23873  sodorifen synthase
Genes
SRR: SerAS9_2199
SRL: SOD_c20750
SRY: M621_11395
SPLY: Q5A_011535
SRS: SerAS12_2199
SRA: SerAS13_2200
STSU: B7R87_03935
Reference
1  [PMID:27231241]
  Authors
Domik D, Magnus N, Piechulla B
  Title
Analysis of a new cluster of genes involved in the synthesis of the unique volatile organic compound sodorifen of Serratia plymuthica 4Rx13.
  Journal
FEMS Microbiol Lett 363:fnw139 (2016)
DOI:10.1093/femsle/fnw139
  Sequence
[srl:SOD_c20750]
Reference
2  [PMID:28408760]
  Authors
Schmidt R, Jager V, Zuhlke D, Wolff C, Bernhardt J, Cankar K, Beekwilder J, Ijcken WV, Sleutels F, Boer W, Riedel K, Garbeva P
  Title
Fungal volatile compounds induce production of the secondary metabolite Sodorifen in Serratia plymuthica PRI-2C.
  Journal
Sci Rep 7:862 (2017)
DOI:10.1038/s41598-017-00893-3
  Sequence
[sply:Q5A_011535]
Reference
3  [PMID:30133268]
  Authors
von Reuss S, Domik D, Lemfack MC, Magnus N, Kai M, Weise T, Piechulla B
  Title
Sodorifen Biosynthesis in the Rhizobacterium Serratia plymuthica Involves Methylation and Cyclization of MEP-Derived Farnesyl Pyrophosphate by a SAM-Dependent C-Methyltransferase.
  Journal
J Am Chem Soc 140:11855-11862 (2018)
DOI:10.1021/jacs.8b08510
  Sequence
[srl:SOD_c20750]
Other DBs
ExplorEnz - The Enzyme Database: 4.2.3.205
IUBMB Enzyme Nomenclature: 4.2.3.205
ExPASy - ENZYME nomenclature database: 4.2.3.205
BRENDA, the Enzyme Database: 4.2.3.205

  All links  
Chemical substance (3)   
   KEGG COMPOUND (3)   
Chemical reaction (1)   
   KEGG REACTION (1)   
Gene (8)   
   KEGG ORTHOLOGY (1)   
   KEGG GENES (7)   
All databases (12)   

Download RDF
DBGET integrated database retrieval system