KEGG   Escherichia coli K-12 MG1655: b3308
Entry
b3308             CDS       T00007                                 
Symbol
rplE
Name
(RefSeq) 50S ribosomal subunit protein L5
  KO
K02931  large subunit ribosomal protein L5
Organism
eco  Escherichia coli K-12 MG1655
Pathway
eco03010  Ribosome
Brite
KEGG Orthology (KO) [BR:eco00001]
 09120 Genetic Information Processing
  09122 Translation
   03010 Ribosome
    b3308 (rplE)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03011 Ribosome [BR:eco03011]
    b3308 (rplE)
Ribosome [BR:eco03011]
 Ribosomal proteins
  Mitochondria/ Chloroplast
   Large subunit
    b3308 (rplE)
  Bacteria
    b3308 (rplE)
  Archaea
    b3308 (rplE)
SSDB
Motif
Pfam: Ribosomal_L5_C Ribosomal_L5 Tsr0524-like
Other DBs
NCBI-GeneID: 947800
NCBI-ProteinID: NP_417767
Pasteur: rplE
RegulonDB: ECK120000859
ECOCYC: EG10868
ASAP: ABE-0010833
UniProt: P62399
Structure
Position
complement(3446899..3447438)
AA seq 179 aa
MAKLHDYYKDEVVKKLMTEFNYNSVMQVPRVEKITLNMGVGEAIADKKLLDNAAADLAAI
SGQKPLITKARKSVAGFKIRQGYPIGCKVTLRGERMWEFFERLITIAVPRIRDFRGLSAK
SFDGRGNYSMGVREQIIFPEIDYDKVDRVRGLDITITTTAKSDEEGRALLAAFDFPFRK
NT seq 540 nt   +upstreamnt  +downstreamnt
atggcgaaactgcatgattactacaaagacgaagtagttaaaaaactcatgactgagttt
aactacaattctgtcatgcaagtccctcgggtcgagaagatcaccctgaacatgggtgtt
ggtgaagcgatcgctgacaaaaaactgctggataacgcagcagcagacctggcagcaatc
tccggtcaaaaaccgctgatcaccaaagcacgcaaatctgttgcaggcttcaaaatccgt
cagggctatccgatcggctgtaaagtaactctgcgtggcgaacgcatgtgggagttcttt
gagcgcctgatcactattgctgtacctcgtatccgtgacttccgtggcctgtccgctaag
tctttcgacggtcgtggtaactacagcatgggtgtccgtgagcagatcatcttcccagaa
atcgactacgataaagtcgaccgcgttcgtggtttggatattaccattaccactactgcg
aaatctgacgaagaaggccgcgctctgctggctgcctttgacttcccgttccgcaagtaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   ASAP (1)   
   ECOCYC (1)   
   OC (1)   
   PASTEUR (1)   
   REGULONDB (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
3D Structure (379)   
   PDB (379)   
Protein domain (3)   
   Pfam (3)   
All databases (399)   

Download RDF
DBGET integrated database retrieval system