KEGG   Frankia alni: FRAAL0380
Entry
FRAAL0380         CDS       T00384                                 
Symbol
gadB
Name
(GenBank) glutamate decarboxylase, PLP-dependent, isozyme beta
  KO
K01580  glutamate decarboxylase [EC:4.1.1.15]
Organism
fal  Frankia alni
Pathway
fal00250  Alanine, aspartate and glutamate metabolism
fal00410  beta-Alanine metabolism
fal00430  Taurine and hypotaurine metabolism
fal00650  Butanoate metabolism
fal01100  Metabolic pathways
fal01110  Biosynthesis of secondary metabolites
fal01120  Microbial metabolism in diverse environments
fal02024  Quorum sensing
Module
fal_M00027  GABA (gamma-Aminobutyrate) shunt
Brite
KEGG Orthology (KO) [BR:fal00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00650 Butanoate metabolism
    FRAAL0380 (gadB)
  09105 Amino acid metabolism
   00250 Alanine, aspartate and glutamate metabolism
    FRAAL0380 (gadB)
  09106 Metabolism of other amino acids
   00410 beta-Alanine metabolism
    FRAAL0380 (gadB)
   00430 Taurine and hypotaurine metabolism
    FRAAL0380 (gadB)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FRAAL0380 (gadB)
Enzymes [BR:fal01000]
 4. Lyases
  4.1  Carbon-carbon lyases
   4.1.1  Carboxy-lyases
    4.1.1.15  glutamate decarboxylase
     FRAAL0380 (gadB)
SSDB
Motif
Pfam: Pyridoxal_deC DUF5386
Other DBs
NCBI-ProteinID: CAJ59056
RhizoBase: FRAAL0380
UniProt: Q0RTP2
Position
448515..449921
AA seq 468 aa
MALHGKASGSQAEQTVDVRPQLVRPGEDVVVPRFRIPRESISPETAYQIVHDELMLDGNA
RLNLATFVTTWMDPQADRLMAECASKNMIDKDEYPQTAELEKRCVNILADLWHAPDSEHA
VGCSTTGSSEACMLAGLALLRRWRARRRAAGAPADRPNLVMGVNVQVCWDKFARYWDVEP
RLVPMAPGRTHLTADEAAARCDENTIGVVAILGSTFDGSYEPVAEIAAALDRLAAAGGPD
VPVHVDGASGGFVAPFCDPELVWDFQLDRVVSINASGHKYGLVYPGVGWVLWRDRAHLPD
ELVFEVDYLGGKMPTFSLNFSRPGAQVVTQYYTLLQLGFAGYRRVAQACRDNARWLADEV
ARMGPFELVSDGSGIPAFAFRLRDEITDYTVFDISELLRTRGWLVPAYRFPPDLTDLAVL
RIVVRHEFSRDLAGLLVADLRRVVDRLSGAGRPLPPPPPDGEAASFHH
NT seq 1407 nt   +upstreamnt  +downstreamnt
atggctctgcacgggaaggcgagtgggtcgcaggcggagcagacggtcgacgtgcggccg
cagctggtccggccgggggaggacgtggtcgtcccccggttccggatcccgcgggagtcg
atctcgcccgagaccgcctaccagatcgttcatgacgagctgatgctcgacggcaacgcg
cggctgaacctggcgacgttcgtgaccacctggatggacccccaggccgatcggctgatg
gccgagtgcgcatccaagaacatgatcgacaaggatgagtacccgcagacggcggagctg
gagaagcgctgcgtcaacatcctcgcggacctgtggcacgcccccgactcggagcatgcg
gtcggctgctcgaccaccggctcctccgaggcgtgcatgctcgccggcctggcgctgctg
cgccgctggcgggcccggcggcgggcggcgggcgccccggccgaccggccgaacctcgtc
atgggcgtcaacgtccaggtgtgctgggacaagttcgcccgctactgggacgtggagcca
cggctggttccgatggcgccgggccgcacgcacctgaccgcagacgaggccgccgcacgc
tgtgacgagaacacgatcggcgtcgtggcgatcctcggctcgacgttcgacggcagttac
gagccggtcgccgagatcgccgccgcactcgaccgcctggccgccgcgggtggcccggac
gtgccggtgcacgtcgacggcgcgtccggcgggttcgtcgccccgttctgcgaccccgaa
ctggtctgggacttccagctcgaccgggtcgtgtcgatcaatgcctcggggcacaagtac
gggctggtctacccgggggtcggctgggtgctgtggcgcgaccgcgcccacctgccggac
gagctcgtgttcgaggtggactacctcggcgggaagatgccgacgttctcgctgaacttc
tcccggccgggggctcaggtcgtcacgcagtactacacgctgctccaactgggcttcgcc
ggctaccgccgggtggctcaggcgtgccgggacaacgcccggtggctcgccgacgaggtg
gcccggatgggtcccttcgagctcgtctcggacggcagcgggattcccgcgttcgcgttc
cggctgcgcgacgagatcaccgactacaccgtcttcgacatctccgagctgctgcgtacc
cgcggctggctggtgcccgcctaccggttcccgccggacctgaccgacctcgccgtgctg
cggatcgtggtacgccacgagttcagccgcgatctcgccgggctgctcgtcgccgacctg
cgccgggtcgtggacaggctgagcggcgccgggcggcccctcccgccgcccccgccggac
ggcgaggcggcctccttccaccactga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (9)   
   KEGG PATHWAY (8)   
   KEGG MODULE (1)   
Chemical substance (9)   
   KEGG COMPOUND (9)   
Chemical reaction (5)   
   KEGG ENZYME (1)   
   KEGG REACTION (4)   
Genome (1)   
   KEGG GENOME (1)   
Gene (4)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   OC (1)   
   RHIZOBASE (1)   
Protein sequence (1)   
   UniProt (1)   
Protein domain (2)   
   Pfam (2)   
All databases (33)   

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