KEGG   Heterocephalus glaber (naked mole-rat): 101704761
Entry
101704761         CDS       T02812                                 
Symbol
Prpf6
Name
(RefSeq) pre-mRNA processing factor 6
  KO
K12855  pre-mRNA-processing factor 6
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Pathway
hgl03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    101704761 (Prpf6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hgl03041]
    101704761 (Prpf6)
Spliceosome [BR:hgl03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    101704761 (Prpf6)
 Complex C
   U5 SnRNP specific factors
    101704761 (Prpf6)
SSDB
Motif
Pfam: PRP1_N TPR_14 TPR_19 TPR_16 TPR_17 Suf TPR_8 FAT
Other DBs
NCBI-GeneID: 101704761
NCBI-ProteinID: XP_004841181
UniProt: A0A0P6K8U3
Position
Un
AA seq 941 aa
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENNEYER
ARRLLAKARSSAPTARVFMKSVKLEWVLGNIAAAQELCEEALKHYEDFPKLWMMKGQIEE
QGELMENAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAVFLEARPQRKTKSVDALKKCEHD
PHVLLAVAKLFWSERKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CENAEPRHGELWCTVSKDITNWQRKIGEILVLVAAHIKNTF
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgaacaagaagaagaaaccgttcctgggcatgcccgcgccgctcggctatgtgccgggg
ctgggccgcggtgccactggcttcactacccgctcagacattgggcctgcccgggatgca
aatgatcctgtggacgatcgccatgcaccaccaggcaaaagaaccgtgggggaccagatg
aagaaaaaccaggctgctgatgatgatgatgaggatctgaatgacaccaactatgatgag
tttaatggttatgctgggagcctcttctcaagtggaccctatgaaaaagatgatgaggaa
gcagatgctatttatgcagctctggataaaaggatggatgaaagaaggaaagaaaggaga
gaacaaagggagaaagaagagattgagaaatacagaatggaacgccccaaaatccagcaa
cagttctcagatctcaaaaggaagttggcagaggtcacagaagaagagtggctgagcatc
ccggaggtcggcgatgccagaaacaaacgtcagcggaatccacgttatgagaagctgacc
cctgttcctgatagctttttcgccaaacatttacagacgggggagaaccatacttctgtg
gatccccggcaaactcaatttggaggtctgaacacaccctatccaggcgggctgaacacg
ccatatccaggtggaatgaccccgggcctgatgacacctggcacgggggagctggacatg
aggaagattgggcaagcgaggaacaccctgatggacatgaggttgagccaggtgtctgac
tcggtgagtggacagactgttgtggaccccaaaggctatctgacagatctaaactctatg
atcccgacccatggaggggacatcaatgatatcaagaaggcgcggctgctcctcaagtct
gttcgagagacaaatcctcatcacccaccagcctggattgcctctgcacggctggaggaa
gtcactgggaagctgcaagtggctcggaaccttattatgaaggggacagagatgtgcccc
aagagtgaagatgtctggctagaagcagccaggttgcagcctggggacacagctaaggct
gttgtggcccaggcagtccgtcatctcccacagtctgttaggatttacatcagagcagca
gagctagaaacagacattcgtgcaaagaagcgggttcttcggaaagccctagagcatgtt
ccaaactctgttcgcttgtggaaagcagctgttgagctggaagagcctgaagatgctaga
atcatgctcagccgagctgtggagtgctgccccaccagtgtagagctctggcttgctctg
gcgaggctggagacttatgaaaatgcccgcaaagtcttaaataaggcacgtgagaacatt
cctacagaccggcacatctggatcacagctgccaagcttgaggaggccaatgggaacact
cagatggtggagaagatcattgacagagctatcacctcactgcgggccaatggtgtggag
atcaaccgtgagcagtggatccaggatgctgaggagtgtgacagggcagggagcgtggcc
acctgccaagcagtcatgcgtgccgtgattggcatcgggattgaagaagaagaccggaag
cacacctggatggaagatgctgacagttgtgtagcccacaatgccctggagtgtgcacga
gctatctatgcctatgccctgcaagtgttccccagcaagaagagtgtgtggctacgagct
gcgtactttgaaaaaaatcacggcaccagggagtctctggaagcacttctgcagagggct
gtggcccactgccccaaggcagaggtgctgtggctcatgggtgccaaatccaagtggctg
gcaggggatgtgccggcagcaaggagcatcttggccttggccttccaggccaaccccaac
agtgaggagatctggttggcagctgtgaagctggagtcagagaacaatgagtacgagcgg
gcccgaaggctgctggccaaggcacggagcagtgcgcccacagctcgagtgtttatgaag
tctgtgaagctggagtgggtgctggggaacattgcagctgcccaggagctgtgtgaggag
gcactgaagcactatgaggacttccccaagctgtggatgatgaaagggcaaattgaggag
cagggggagctgatggagaatgctcgagaagcctacaaccaggggctgaagaagtgcccc
cactccacacccctgtggctcttgctttcccggctagaggagaagattgggcagctgacc
cgagcacgggccattttggagaagtctcgtctgaagaacccaaagaaccctggcctgtgg
ttggagtctgtgaggctggagtaccgtgcagggctgaagaacattgccaatacgctcatg
gccaaggcattgcaggaatgccccaactctggtatcctgtggtctgaagctgtcttcctt
gaggcccggccgcagagaaagaccaagagcgtggatgccctgaagaagtgtgagcatgac
cctcacgtgctgttggctgtggccaagctgttctggagtgagcggaagatcaccaaggcc
cgggagtggttccaccgcacagtgaagattgattcagacctgggggatgcctgggctttc
ttctacaagtttgagctgcagcacggcaccgaggagcagcaggaggaggtgaggaaacgc
tgtgagaatgcagagccccggcatggggagctgtggtgcaccgtgtccaaggacatcacc
aactggcagaggaagattggggagatcctggtgctggtggctgctcacatcaagaacaca
ttctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (23)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (2)   
   UniProt (1)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (8)   
   Pfam (8)   
All databases (44)   

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