KEGG   Heterocephalus glaber (naked mole-rat): 101722572
Entry
101722572         CDS       T02812                                 
Symbol
Pcdh19
Name
(RefSeq) protocadherin 19
  KO
K16499  protocadherin delta 2
Organism
hgl  Heterocephalus glaber (naked mole-rat)
Brite
KEGG Orthology (KO) [BR:hgl00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hgl04515]
    101722572 (Pcdh19)
Cell adhesion molecules [BR:hgl04515]
 Cadherins
  Protocadherins
   101722572 (Pcdh19)
SSDB
Motif
Pfam: Cadherin Cadherin_2 zf-HIT
Other DBs
NCBI-GeneID: 101722572
NCBI-ProteinID: XP_004872649
UniProt: G5BYG7
Position
Un
AA seq 1145 aa
MESLLLPVLLLLAILWTQAAALINLKYSVEEEQRAGTVIANVAKDAREAGFALDSRQASA
FRVVSNSAPHLVDINPSSGLLVTKQKIDRDLLCRQSPKCIISLEVMSSSMEICVIKVEIK
DLNDNAPSFPAAQIELEISEAASPGTRIPLDGAYDPDSGSFGVQTYELTPNELFGLEIKT
RGDGSRFAELVVEKSLDRETQSHYSFRIIALDGGDPPRLGTVGLSIKVTDSNDNNPVFSE
STYSVSVPENSPPNTPVIRLNASDPDEGTNGQVIYSFYGYVNDRTRELFHIDPHSGLVTV
TGALDYEEGHEYELDVQAKDLGPNSIPAHCKVTVSVLDTNDNPPVINLLSVNSELVEVSE
SSPPGYVIALVRVSDRDSGLNGRVQCRLLGNVPFRLQEYESFSTILVDGRLDREQHDQYN
LTIQARDGGVPMLQSAKSFTVLITDENDNHPHFSKPYYQVIVQENNTPGAYLLSVSARDP
DLGLNGSVSYQIVPSQVRDMPVFTYVSINPNSGDIYALRSFNHEQTKAFEFKVLAKDGGL
PSLQSNATVRVIILDVNDNTPIITAPPLINGTAEINIPRNSGIGYLVTVVKAEDYDEGEN
GRVTYDLTEGDRGFFEIDQVNGEVRTKRTFGENSKASYELIVVAHDHGKMSLSASALVLV
YLSPALDAQESMGSVNLSLIFIVALGSIAGILFVTMIFVAIKCKRDNKEIRTYNCSKCLT
ITCLLGCFIKGQNSKCLHCISVSPISEEQEKKAEEKVSLRGKRIAEYSYGHQKKSSKKKK
ISKNDIRLVPRDVEETDKMNVVSCSSLTSSLNYFDYHQQTLPLGCRRSESTFLNVENQST
RNTGASHIYHHSFNSQGPQQPDLIINGVPLPETENYSFDSNYANSRAHLIRSSSTFKDLE
GNSLKDSGHEESDQTDSEHDVQRSLYCDTAVNDVLNTNVISMGSQMPDHDQNEGFHCREE
CRILGHSDRCWMPRNPMPTRSKSPEHVRNVITLSIEATAADVEAYDDCGPIKRTFATFGK
DVSDQPAEERPTLKSKRNVNVIICSPKVNSAIREAGNGCEAISPVTSPLRLKSHLPTKPS
VSYMVALGPPTRDLEQYINSGPSRPSEAEPRGADNEKVVHEVNTILKEGRDKESPGVKRL
KDIVL
NT seq 3438 nt   +upstreamnt  +downstreamnt
atggagtctctcctgctgccggtgctgctgctgttggccatactttggacgcaagcggcc
gccctcattaacctcaagtattccgtagaagaggagcagcgcgcggggacagtgatagct
aatgtggccaaggacgcgcgggaggcgggcttcgcgctggactcccggcaggcctctgcc
ttcagagtggtgtccaactcggctccacaccttgtggacatcaaccccagctctgggctg
ctggtcaccaagcagaagatcgaccgggacctgctgtgccgccagagtccaaagtgcatc
atctcgctcgaggtcatgtccagttcaatggagatctgtgtgattaaggtagagatcaag
gaccttaacgacaatgcacctagtttcccggcagcacagattgagctggagatctcggag
gcagccagccctggcacgcgtatcccgctggacggcgcctatgatccggactcaggaagc
tttggagtgcagacatacgagctcacacccaacgagctgttcggtctcgagatcaagacg
cggggtgacggttctcgcttcgctgaactagtggtggagaagagcctggaccgagagaca
cagtcgcactacagctttcgtatcattgctctcgacggcggggaccctccgcgtctgggc
actgttggcctcagtatcaaggtgactgactccaatgacaacaaccctgtgtttagtgag
tctacctactcggtgagcgtgcctgagaattcacctcccaacacacctgtcatccgcctc
aatgctagcgacccagacgagggcactaatggccaggttatctactctttctatggctat
gtcaacgaccgaacacgtgagctcttccacatcgacccacacagtggcctggttactgtc
accggtgccttagactacgaagagggccacgagtacgaactggacgtgcaggctaaggac
ctggggcccaactctataccggcacactgcaaggttactgtcagcgtgctggacaccaat
gacaacccaccggttatcaacctgctctctgtcaatagtgagcttgtggaggtgagcgag
agctccccgccgggctacgtgattgccctagttcgcgtgtctgatcgcgactcgggcctc
aatggacgcgtgcagtgccgtttgctgggcaacgtaccctttcggctgcaagagtatgaa
agcttttccactatcctggtggacggacggctggatcgagagcagcacgaccaatacaac
cttaccattcaggcacgcgatggtggggtgcccatgctgcaaagtgccaagtcctttact
gtgctcatcactgacgagaacgacaaccaccctcacttctctaagccttactaccaggtc
attgtgcaggagaacaatactcccggcgcctacctgctctccgtgtcagcccgagacccg
gaccttggtcttaatggcagtgtctcctaccagatagtgccatctcaagttcgggacatg
cctgttttcacctacgtctccatcaatccaaactctggcgatatctatgcgcttcgatct
ttcaaccacgagcagaccaaggcattcgaattcaaggtgctggccaaggacggcggcctt
ccttccctgcaaagcaacgctacagtgagggttatcatcctcgatgtcaatgacaatacc
ccgatcatcaccgccccgcctctgattaatggcactgcggagatcaacatcccccggaac
tcaggcataggctacctggtgacggttgtcaaggcagaggactatgacgagggtgagaat
ggccgagtcacctatgacctgactgagggagaccgcggcttttttgaaatagaccaggtc
aatggcgaagtcagaacgaagcgaaccttcggagagaattccaaggcttcctatgagctt
atcgtggtggctcacgaccatggcaaaatgtctctctccgcctctgcgctggtcctagtc
tacctatccccggcgcttgatgcccaagagtcaatgggctcagtgaacctatctctgatt
ttcattgttgccctgggctccattgctggcatactctttgttactatgatcttcgtggca
atcaagtgcaagcgagacaacaaagagatccgaacctacaactgcagtaaatgtttaacc
atcacttgcctcctcggctgttttataaaaggacaaaacagcaagtgtctgcattgcatc
tcggtttctcccattagcgaggagcaagaaaaaaaggccgaggagaaagtgagcctaagg
ggaaagagaattgctgagtactcctatgggcatcaaaagaaatcaagtaagaagaaaaaa
atcagtaagaatgacattcgcctggtgcctcgagatgtggaagagacagacaaaatgaat
gttgtcagctgctcctccctgacctcctccctcaactattttgactaccaccagcagact
ctgcccctgggctgccgccgctctgagagcactttcctgaacgtggagaaccagagtacc
cgaaatacgggtgccagccacatctaccatcactctttcaacagccagggaccgcagcaa
ccagatctaatcatcaatggtgtgcctctgcctgagactgaaaattattcttttgactcc
aactacgcgaacagccgagcccatttaatcagaagcagctccaccttcaaagacctagag
ggaaacagcctgaaggatagtggacatgaagagagtgaccagactgacagtgaacatgat
gtccagaggagcttgtattgtgatactgctgtcaacgatgtgctaaataccaacgtaatc
tccatgggatctcagatgcctgatcatgatcagaatgaaggatttcattgcagggaagaa
tgccggattcttggtcactctgacaggtgctggatgccccggaatccgatgcccacccgc
tccaagtcccctgagcatgtgaggaacgtcatcacgctgtccattgaagctactgctgct
gatgttgaggcttatgacgactgcggccccatcaagcgtacttttgcaacctttgggaaa
gatgtcagtgaccagccggctgaggagaggcccaccctgaaaagcaagaggaatgtcaat
gtgatcatctgcagccccaaggtcaacagcgctatccgcgaggcaggcaatgggtgtgag
gctattagcccagtcacctctcccctccgtctcaagagtcatctgcccaccaagccttct
gtgtcttacatggttgccctaggtccgccgacccgtgatctggagcagtacatcaacagt
ggcccttctcgtccctctgaagctgagccccgtggagctgacaatgagaaagtcgtgcat
gaggtcaacactattctgaaggagggtcgtgacaaagagtcccctggagtgaagcgtctg
aaggatattgttctctaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   RefSeq(pep) (6)   
DNA sequence (8)   
   RefSeq(nuc) (6)   
   GenBank (1)   
   EMBL (1)   
Protein domain (3)   
   Pfam (3)   
All databases (37)   

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