KEGG   Homo sapiens (human): 10652
Entry
10652             CDS       T01001                                 
Symbol
YKT6
Name
(RefSeq) YKT6 v-SNARE homolog
  KO
K08516  synaptobrevin homolog YKT6
Organism
hsa  Homo sapiens (human)
Pathway
hsa04130  SNARE interactions in vesicular transport
hsa04140  Autophagy - animal
Network
nt06532  Autophagy
  Element
N01720  Autophagosome and lysosome fusion, trans-SNARE
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04130 SNARE interactions in vesicular transport
    10652 (YKT6)
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    10652 (YKT6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    10652 (YKT6)
Membrane trafficking [BR:hsa04131]
 SNARE
  VAMP, Ykt6, Sec22 (R)
   Ykt6
    10652 (YKT6)
SSDB
Motif
Pfam: Longin Synaptobrevin
Other DBs
NCBI-GeneID: 10652
NCBI-ProteinID: NP_006546
OMIM: 606209
HGNC: 16959
Ensembl: ENSG00000106636
UniProt: O15498 A4D2J0
Structure
Position
7:44200978..44214294
AA seq 198 aa
MKLYSLSVLYKGEAKVVLLKAAYDVSSFSFFQRSSVQEFMTFTSQLIVERSSKGTRASVK
EQDYLCHVYVRNDSLAGVVIADNEYPSRVAFTLLEKVLDEFSKQVDRIDWPVGSPATIHY
PALDGHLSRYQNPREADPMTKVQAELDETKIILHNTMESLLERGEKLDDLVSKSEVLGTQ
SKAFYKTARKQNSCCAIM
NT seq 597 nt   +upstreamnt  +downstreamnt
atgaagctgtacagcctcagcgtcctctacaaaggcgaggccaaggtggtgctgctcaaa
gccgcatacgatgtgtcttccttcagctttttccagagatccagcgttcaggaattcatg
accttcacgagtcaactgattgtggagcgctcatcgaaaggcactagagcttctgtcaaa
gaacaagactatctgtgccacgtctacgtccggaatgatagtcttgcaggtgtggtcatt
gctgacaatgaatacccatcccgggtggcctttaccttgctggagaaggtactagatgaa
ttctccaagcaagtcgacaggatagactggccagtaggatcccctgctacaatccattac
ccagccctggatggtcacctcagtagataccagaacccacgagaagctgatcccatgact
aaagtgcaggccgaactagatgagaccaaaatcattctgcacaacaccatggagtctctg
ttagagcgaggtgagaagctagatgacttggtgtccaaatccgaggtgctgggaacacag
tctaaagccttctataaaactgcccggaaacaaaactcatgctgtgccatcatgtga

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