KEGG   Homo sapiens (human): 22938
Entry
22938             CDS       T01001                                 
Symbol
SNW1, Bx42, FUN20, NCOA-62, PRPF45, Prp45, SKIIP, SKIP, SKIP1
Name
(RefSeq) SNW domain containing 1
  KO
K06063  SNW domain-containing protein 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
hsa04330  Notch signaling pathway
hsa05169  Epstein-Barr virus infection
hsa05203  Viral carcinogenesis
Network
nt06165  Epstein-Barr virus (EBV)
  Element
N00224  EBV EBNALP RBP-Jk-mediated transcription
N00225  EBV EBNA2 to RBP-Jk-mediated transcription
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    22938 (SNW1)
 09130 Environmental Information Processing
  09132 Signal transduction
   04330 Notch signaling pathway
    22938 (SNW1)
 09160 Human Diseases
  09161 Cancer: overview
   05203 Viral carcinogenesis
    22938 (SNW1)
  09172 Infectious disease: viral
   05169 Epstein-Barr virus infection
    22938 (SNW1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    22938 (SNW1)
Spliceosome [BR:hsa03041]
 Complex B
  Other components
   Prp19-related factors
    22938 (SNW1)
 Complex C
    22938 (SNW1)
SSDB
Motif
Pfam: SKIP_SNW Amidohydro_1
Other DBs
NCBI-GeneID: 22938
NCBI-ProteinID: NP_036377
OMIM: 603055
HGNC: 16696
Ensembl: ENSG00000100603
UniProt: Q13573
Structure
Position
14:complement(77717599..77761156)
AA seq 536 aa
MALTSFLPAPTQLSQDQLEAEEKARSQRSRQTSLVSSRREPPPYGYRKGWIPRLLEDFGD
GGAFPEIHVAQYPLDMGRKKKMSNALAIQVDSEGKIKYDAIARQGQSKDKVIYSKYTDLV
PKEVMNADDPDLQRPDEEAIKEITEKTRVALEKSVSQKVAAAMPVRAADKLAPAQYIRYT
PSQQGVAFNSGAKQRVIRMVEMQKDPMEPPRFKINKKIPRGPPSPPAPVMHSPSRKMTVK
EQQEWKIPPCISNWKNAKGYTIPLDKRLAADGRGLQTVHINENFAKLAEALYIADRKARE
AVEMRAQVERKMAQKEKEKHEEKLREMAQKARERRAGIKTHVEKEDGEARERDEIRHDRR
KERQHDRNLSRAAPDKRSKLQRNENRDISEVIALGVPNPRTSNEVQYDQRLFNQSKGMDS
GFAGGEDEIYNVYDQAWRGGKDMAQSIYRPSKNLDKDMYGDDLEARIKTNRFVPDKEFSG
SDRRQRGREGPVQFEEDPFGLDKFLEEAKQHGGSKRPSDSSRPKEHEHEGKKRRKE
NT seq 1611 nt   +upstreamnt  +downstreamnt
atggcgctcaccagctttttacctgcacctactcagctatctcaggaccagcttgaggct
gaagaaaaggcaagatcccagagatcacggcagacctcactggtctcctcccgaagagaa
cctcccccgtacggataccggaaaggctggatacctcggttattagaggattttggagat
ggaggtgcttttccagagatccatgtggcccagtatccactggatatgggacgaaagaaa
aaaatgtcgaatgcgctggccattcaggtggattctgaaggaaaaattaaatatgatgca
attgctcgacaaggacagtcaaaagacaaggtcatttatagcaaatacactgacctggtt
ccaaaggaggttatgaatgcagatgatccagacctgcaaaggcccgatgaagaagctatt
aaagagataacagaaaagacaagagtagccttagaaaaatctgtatcacagaaggtcgcc
gcagccatgccagttcgagcagctgacaaattggctcctgctcagtatatccgatacaca
ccatctcagcaaggagtggcattcaactctggagctaaacagagggttattcggatggta
gaaatgcagaaagatccaatggagcctccaaggttcaagattaataagaaaattccccgg
ggaccaccttctcctcctgcgcctgtcatgcattctcctagccgaaagatgactgtaaag
gaacaacaagagtggaagattcctccttgtatttctaactggaaaaatgcaaagggttat
acaattccattagacaaacgtctggctgctgatggaagaggactacagacagtacacata
aatgaaaatttcgccaaattggcagaagccctctacattgctgatcggaaggctcgtgaa
gctgtggaaatgcgtgcccaagtagagagaaaaatggctcagaaagaaaaggaaaaacat
gaagagaaacttagagaaatggcccagaaagccagggagagaagagctgggatcaaaact
catgtggaaaaagaggatggggaggcacgtgagagggatgaaatccggcatgacaggcga
aaagagagacagcatgaccggaatctttccagggcagctcctgataagaggtcgaaactt
cagagaaatgaaaatcgggatatcagtgaagttattgctctcggtgttcctaatcctcgg
acttccaatgaagttcagtatgaccaaaggctcttcaaccaatccaagggtatggacagt
ggatttgcaggtggagaagatgaaatttataatgtttatgatcaagcctggagaggtggt
aaagatatggcccagagtatttataggcccagtaaaaatctggacaaggacatgtatggt
gatgacctagaagccagaataaagaccaacagatttgttcccgacaaggagttttctggt
tcagaccgtagacagagaggccgagaaggaccagtgcagtttgaggaagatccttttggt
ttggacaagtttttggaagaagccaaacagcatggtggctctaaaagaccctcagatagc
agccgccccaaggaacacgagcatgaaggcaagaagaggaggaaggaatag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (4)   
   KEGG PATHWAY (4)   
Network (3)   
   KEGG NETWORK (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (6)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (39)   
   RefSeq(nuc) (5)   
   GenBank (17)   
   EMBL (17)   
3D Structure (23)   
   PDB (23)   
Protein domain (2)   
   Pfam (2)   
All databases (101)   

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