KEGG   Homo sapiens (human): 23016
Entry
23016             CDS       T01001                                 
Symbol
EXOSC7, EAP1, RRP42, Rrp42p, hRrp42p, p8
Name
(RefSeq) exosome component 7
  KO
K12589  exosome complex component RRP42
Organism
hsa  Homo sapiens (human)
Pathway
hsa03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    23016 (EXOSC7)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    23016 (EXOSC7)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     23016 (EXOSC7)
 Prokaryotic type
  Archeal mRNA degradation factors
   Exosome components
    Cofactors
     23016 (EXOSC7)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 23016
NCBI-ProteinID: NP_055819
OMIM: 606488
HGNC: 28112
Ensembl: ENSG00000075914
UniProt: Q15024 B2RDZ9
Structure
Position
3:44976244..45012668
AA seq 291 aa
MASVTLSEAEKVYIVHGVQEDLRVDGRGCEDYRCVEVETDVVSNTSGSARVKLGHTDILV
GVKAEMGTPKLEKPNEGYLEFFVDCSASATPEFEGRGGDDLGTEIANTLYRIFNNKSSVD
LKTLCISPREHCWVLYVDVLLLECGGNLFDAISIAVKAALFNTRIPRVRVLEDEEGSKDI
ELSDDPYDCIRLSVENVPCIVTLCKIGYRHVVDATLQEEACSLASLLVSVTSKGVVTCMR
KVGKGSLDPESIFEMMETGKRVGKVLHASLQSVVHKEESLGPKRQKVGFLG
NT seq 876 nt   +upstreamnt  +downstreamnt
atggcgtccgtgacgctgagcgaggcggagaaggtgtacatcgtgcatggcgtccaggaa
gacctccgtgtggatggccgtggctgtgaggactaccgatgtgtcgaagtggaaactgat
gtggtgtccaacactagtgggtccgccagggtcaagctgggtcacacagacatcttggtg
ggagtgaaagcagaaatggggacgccgaagctggagaaaccaaatgaaggctacttggag
ttctttgttgactgttcagccagtgctacccctgaatttgaaggtagaggaggtgatgac
cttggcaccgagatcgctaacaccctctatcggatatttaacaataaaagcagtgtcgac
ttaaagaccctctgcattagtcctcgggagcactgctgggttctctatgtggatgtgctg
cttctggaatgtggtggaaatttgtttgatgccatttccattgctgtaaaggctgctctc
ttcaatacaaggataccaagggttcgagttttggaggatgaagaggggtcgaaggacatt
gaattgtcagatgacccttatgactgcatacgactaagtgtggagaatgtcccctgcatt
gtcactctgtgcaagattggctatcggcatgtggtggatgctactcttcaggaggaggcc
tgctcgctggccagcttgctggtgtcggtgaccagcaagggagttgtgacgtgcatgagg
aaagtggggaagggcagcctggacccagagagcatcttcgagatgatggagactggcaag
cgtgtgggcaaggtactgcatgcctccttgcagagtgttgtgcacaaggaagaaagcctg
gggcccaagagacagaaagttggattcctgggatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (10)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (7)   
DNA sequence (22)   
   RefSeq(nuc) (8)   
   GenBank (7)   
   EMBL (7)   
3D Structure (4)   
   PDB (4)   
Protein domain (2)   
   Pfam (2)   
All databases (54)   

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