KEGG   Homo sapiens (human): 23047
Entry
23047             CDS       T01001                                 
Symbol
PDS5B, APRIN, AS3, CG008
Name
(RefSeq) PDS5 cohesin associated factor B
  KO
K11267  sister chromatid cohesion protein PDS5
Organism
hsa  Homo sapiens (human)
Pathway
hsa04110  Cell cycle
Network
nt06512  Chromosome cohesion and segregation
  Element
N01484  Establishment of cohesion
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09143 Cell growth and death
   04110 Cell cycle
    23047 (PDS5B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    23047 (PDS5B)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   Adherin complex
    23047 (PDS5B)
SSDB
Motif
Pfam: PDS5 PI-TkoII_IV DUF4420
Other DBs
NCBI-GeneID: 23047
NCBI-ProteinID: NP_055847
OMIM: 605333
HGNC: 20418
Ensembl: ENSG00000083642
UniProt: Q9NTI5
Structure
Position
13:32586452..32778019
AA seq 1447 aa
MAHSKTRTNDGKITYPPGVKEISDKISKEEMVRRLKMVVKTFMDMDQDSEEEKELYLNLA
LHLASDFFLKHPDKDVRLLVACCLADIFRIYAPEAPYTSPDKLKDIFMFITRQLKGLEDT
KSPQFNRYFYLLENIAWVKSYNICFELEDSNEIFTQLYRTLFSVINNGHNQKVHMHMVDL
MSSIICEGDTVSQELLDTVLVNLVPAHKNLNKQAYDLAKALLKRTAQAIEPYITNFFNQV
LMLGKTSISDLSEHVFDLILELYNIDSHLLLSVLPQLEFKLKSNDNEERLQVVKLLAKMF
GAKDSELASQNKPLWQCYLGRFNDIHVPIRLECVKFASHCLMNHPDLAKDLTEYLKVRSH
DPEEAIRHDVIVSIVTAAKKDILLVNDHLLNFVRERTLDKRWRVRKEAMMGLAQIYKKYA
LQSAAGKDAAKQIAWIKDKLLHIYYQNSIDDRLLVERIFAQYMVPHNLETTERMKCLYYL
YATLDLNAVKALNEMWKCQNLLRHQVKDLLDLIKQPKTDASVKAIFSKVMVITRNLPDPG
KAQDFMKKFTQVLEDDEKIRKQLEVLVSPTCSCKQAEGCVREITKKLGNPKQPTNPFLEM
IKFLLERIAPVHIDTESISALIKQVNKSIDGTADDEDEGVPTDQAIRAGLELLKVLSFTH
PISFHSAETFESLLACLKMDDEKVAEAALQIFKNTGSKIEEDFPHIRSALLPVLHHKSKK
GPPRQAKYAIHCIHAIFSSKETQFAQIFEPLHKSLDPSNLEHLITPLVTIGHIALLAPDQ
FAAPLKSLVATFIVKDLLMNDRLPGKKTTKLWVPDEEVSPETMVKIQAIKMMVRWLLGMK
NNHSKSGTSTLRLLTTILHSDGDLTEQGKISKPDMSRLRLAAGSAIVKLAQEPCYHEIIT
LEQYQLCALAINDECYQVRQVFAQKLHKGLSRLRLPLEYMAICALCAKDPVKERRAHARQ
CLVKNINVRREYLKQHAAVSEKLLSLLPEYVVPYTIHLLAHDPDYVKVQDIEQLKDVKEC
LWFVLEILMAKNENNSHAFIRKMVENIKQTKDAQGPDDAKMNEKLYTVCDVAMNIIMSKS
TTYSLESPKDPVLPARFFTQPDKNFSNTKNYLPPEMKSFFTPGKPKTTNVLGAVNKPLSS
AGKQSQTKSSRMETVSNASSSSNPSSPGRIKGRLDSSEMDHSENEDYTMSSPLPGKKSDK
RDDSDLVRSELEKPRGRKKTPVTEQEEKLGMDDLTKLVQEQKPKGSQRSRKRGHTASESD
EQQWPEEKRLKEDILENEDEQNSPPKKGKRGRPPKPLGGGTPKEEPTMKTSKKGSKKKSG
PPAPEEEEEEERQSGNTEQKSKSKQHRVSRRAQQRAESPESSAIESTQSTPQKGRGRPSK
TPSPSQPKKNVRVGRSKQAATKENDSSEEVDVFQGSSPVDDIPQEETEEEEVSTVNVRRR
SAKRERR
NT seq 4344 nt   +upstreamnt  +downstreamnt
atggctcattcaaagactaggaccaatgatggaaaaattacatatccgcctggggtcaag
gaaatatcagataaaatatctaaagaggagatggtgagacgattaaagatggttgtgaaa
acttttatggatatggaccaggactctgaagaagaaaaggagctttatttaaacctagct
ttacatcttgcttcagatttttttctcaagcatcctgataaagatgttcgcttactggta
gcctgctgccttgctgatattttcaggatttatgctcctgaagctccttacacatcccct
gataaactaaaggatatatttatgtttataacaagacagttgaaggggctagaggataca
aagagcccacaattcaataggtatttttatttacttgagaacattgcttgggtcaagtca
tataacatatgctttgagttagaagatagcaatgaaattttcacccagctatacagaacc
ttattttcagttataaacaatggccacaatcagaaagtccatatgcacatggtagacctt
atgagctctattatttgtgaaggtgatacagtgtctcaggagcttttggatacggtttta
gtaaatctggtacctgctcataagaatttaaacaagcaagcatatgatttggcaaaggct
ttactgaagaggacagctcaagctattgagccatatattaccaatttttttaatcaggtt
ctgatgcttgggaaaacatctatcagcgatttgtcagagcatgtctttgacttaattttg
gagctctacaatattgatagtcatttgctgctctctgttttaccccagcttgaatttaaa
ttaaagagcaatgataatgaggagcgcctacaagttgttaaactactggcaaaaatgttt
ggggcaaaggattcagaattggcttctcaaaacaagccactttggcagtgctacttgggc
aggtttaatgatatccatgtaccaatccgcctggaatgtgtgaaatttgctagccattgt
ctcatgaaccatcctgatttagcaaaagacttaacagagtatcttaaagtgaggtcacat
gaccctgaggaagctattagacatgatgttattgtgtcaatagttacagctgctaaaaag
gatattcttctggtcaatgatcacttacttaattttgtgagagagagaacattagacaaa
cgatggagagtacgcaaagaagccatgatgggacttgcccaaatttataagaaatatgct
ttacagtcagcagctggaaaagatgctgcaaaacagatagcatggatcaaagacaaattg
ctacatatatattatcaaaatagtattgatgatcgactacttgttgaacggatctttgct
caatacatggttcctcacaatttagaaactacagaacggatgaaatgcttatattacttg
tatgccacactggatttaaatgctgtgaaagcattgaatgaaatgtggaaatgtcaaaat
ctgctccgacatcaagtaaaggatttgcttgacttgattaagcaacccaaaacagatgcc
agtgtcaaggccatattttcaaaagtgatggttattacaagaaatttacctgatcctggt
aaggctcaggatttcatgaagaaattcacacaggtgttagaagatgatgagaaaataaga
aagcagttagaagtacttgttagtccaacatgctcctgcaagcaggctgaaggttgtgtg
cgtgaaataactaagaagttgggcaaccccaaacagcctacaaatcctttcctggaaatg
atcaagtttctcttggagaggatagcacctgtgcacatagataccgaatctatcagtgct
cttattaaacaagtgaacaaatcaatagatggaacagcagatgatgaagatgagggtgtt
ccaactgatcaagccatcagagcaggtcttgaactgcttaaggtactctcatttacacat
cccatctcatttcattctgctgaaacatttgaatcattactggcttgtctgaaaatggat
gatgaaaaagtagcagaagctgcactacaaattttcaaaaacacaggaagcaaaattgaa
gaggattttccacacatcagatcagccttgcttcctgttttacatcacaaatctaaaaaa
ggacccccccgtcaagccaaatatgccattcattgtatccatgcgatattttctagtaaa
gagacccagtttgcacagatatttgagcctctgcataagagcctagatccaagcaacctg
gaacatctcataacaccattggttactattggtcatattgctctccttgcacctgatcaa
tttgctgctcctttgaaatctttggtagctactttcattgtgaaagatcttctcatgaat
gatcggcttccagggaaaaagacaactaaactttgggttccagatgaagaagtatctcct
gagacaatggtcaaaattcaggctattaaaatgatggttcgatggctacttggaatgaaa
aataatcacagtaaatcaggaacttctaccttaagattgctaacaacaatattgcatagt
gatggagacttgacagaacaggggaaaattagtaaaccagatatgtcacgtctgagactt
gctgctgggagtgctattgtgaagctggcacaagaaccctgttaccatgaaatcatcaca
ttagaacaatatcagctatgtgcattagctatcaacgatgaatgctatcaagtaagacaa
gtgtttgcccagaaacttcacaaaggcctttcccgtttacggcttccacttgagtatatg
gcaatctgtgccctttgtgcaaaagatcctgtaaaggagagaagagctcatgctaggcaa
tgtttggtgaaaaatataaatgtaaggcgggagtatctgaagcagcatgcagctgttagt
gaaaaattattgtctcttctaccagagtatgttgttccatatacaattcaccttttggca
catgacccagattatgtcaaagtacaggatattgaacaacttaaagatgttaaagaatgt
ctttggtttgttctggaaatattaatggctaaaaatgaaaataacagtcacgcttttatc
agaaagatggtagaaaatattaaacaaacaaaagatgcccaaggaccagatgatgcaaaa
atgaatgaaaaactgtacactgtgtgtgatgttgccatgaatatcatcatgtcaaagagt
actacatacagtttggaatctcctaaagacccggtactaccagctcgtttcttcactcaa
cctgacaagaatttcagtaacaccaaaaattatctgcctcctgaaatgaaatcatttttc
actcctggaaaacctaaaacaaccaatgttctaggagctgttaacaagccactttcatca
gcaggcaagcaatctcagaccaaatcatcacgaatggaaactgtaagcaatgcaagcagc
agctcaaatccaagctctcctggaagaataaaggggaggcttgatagttctgaaatggat
cacagtgaaaatgaagattacacaatgtcttcacctttgccggggaaaaaaagtgacaag
agagacgactctgatcttgtaaggtctgaattggagaagcctagaggcaggaaaaaaacg
cccgtcacagaacaggaggagaaattaggtatggatgacttgactaagttggtacaggaa
cagaaacctaaaggcagtcagcgaagtcggaaaagaggccatacggcttcagaatctgat
gaacagcagtggcctgaggaaaagaggctcaaagaagatatattagaaaatgaagatgaa
cagaatagtccgccaaaaaagggtaaaagaggccgaccaccaaaacctcttggtggaggt
acaccaaaagaagagccaacaatgaaaacttctaaaaaaggaagcaaaaaaaaatctgga
cctccagcaccagaggaggaggaagaagaagaaagacaaagtggaaatacggaacagaag
tccaaaagcaaacagcaccgagtgtcaaggagagcacagcagagagcagaatctcctgaa
tctagtgcaattgaatccacacagtccacaccacagaaaggacgaggaagaccatcaaaa
acgccatcaccatcacaaccaaaaaaaaatgtccgtgtaggacgctccaaacaagcagct
actaaggaaaatgattcaagtgaagaagtagatgtgtttcagggtagctctcctgtcgat
gatattccacaggaagaaacagaggaggaggaagtttctacagtaaatgtacggcggcga
agtgctaaaagggaacggcgatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Network (2)   
   KEGG NETWORK (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (23)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (25)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (23)   
DNA sequence (50)   
   RefSeq(nuc) (24)   
   GenBank (13)   
   EMBL (13)   
3D Structure (1)   
   PDB (1)   
Protein domain (3)   
   Pfam (3)   
All databases (109)   

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