KEGG   Homo sapiens (human): 23192
Entry
23192             CDS       T01001                                 
Symbol
ATG4B, APG4B, AUTL1, HsAPG4B
Name
(RefSeq) autophagy related 4B cysteine peptidase
  KO
K08342  cysteine protease ATG4 [EC:3.4.22.-]
Organism
hsa  Homo sapiens (human)
Pathway
hsa04136  Autophagy - other
hsa04140  Autophagy - animal
Network
nt06164  Kaposi sarcoma-associated herpesvirus (KSHV)
nt06182  Shigella
nt06532  Autophagy
  Element
N00156  Autophagy-vesicle nucleation/elongation/maturation, LC3-II formation
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04140 Autophagy - animal
    23192 (ATG4B)
   04136 Autophagy - other
    23192 (ATG4B)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:hsa01002]
    23192 (ATG4B)
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    23192 (ATG4B)
   03029 Mitochondrial biogenesis [BR:hsa03029]
    23192 (ATG4B)
Peptidases and inhibitors [BR:hsa01002]
 Cysteine peptidases
  Family C54: Aut2 peptidase family
   23192 (ATG4B)
Membrane trafficking [BR:hsa04131]
 Autophagy
  Autophagosome formation proteins
   Atg8 conjugation proteins
    23192 (ATG4B)
Mitochondrial biogenesis [BR:hsa03029]
 Mitochondrial quality control factors
  Mitophagy factors
   Autophagy-related proteins
    23192 (ATG4B)
SSDB
Motif
Pfam: Peptidase_C54 ATG4_LIR
Other DBs
NCBI-GeneID: 23192
NCBI-ProteinID: NP_037457
OMIM: 611338
HGNC: 20790
Ensembl: ENSG00000168397
UniProt: Q9Y4P1 B3KVU2
Structure
Position
2:241637693..241673857
AA seq 393 aa
MDAATLTYDTLRFAEFEDFPETSEPVWILGRKYSIFTEKDEILSDVASRLWFTYRKNFPA
IGGTGPTSDTGWGCMLRCGQMIFAQALVCRHLGRDWRWTQRKRQPDSYFSVLNAFIDRKD
SYYSIHQIAQMGVGEGKSIGQWYGPNTVAQVLKKLAVFDTWSSLAVHIAMDNTVVMEEIR
RLCRTSVPCAGATAFPADSDRHCNGFPAGAEVTNRPSPWRPLVLLIPLRLGLTDINEAYV
ETLKHCFMMPQSLGVIGGKPNSAHYFIGYVGEELIYLDPHTTQPAVEPTDGCFIPDESFH
CQHPPCRMSIAELDPSIAVGFFCKTEDDFNDWCQQVKKLSLLGGALPMFELVELQPSHLA
CPDVLNLSLDSSDVERLERFFDSEDEDFEILSL
NT seq 1182 nt   +upstreamnt  +downstreamnt
atggacgcagctactctgacctacgacactctccggtttgctgagtttgaagattttcct
gagacctcagagcccgtttggatactgggtagaaaatacagcattttcacagaaaaggac
gagatcttgtctgatgtggcatctagactttggtttacatacaggaaaaactttccagcc
attggggggacaggccccacctcggacacaggctggggctgcatgctgcggtgtggacag
atgatctttgcccaagccctggtgtgccggcacctaggccgagattggaggtggacacaa
aggaagaggcagccagacagctacttcagcgtcctcaacgcattcatcgacaggaaggac
agttactactccattcaccagatagcgcaaatgggagttggcgaaggcaagtccataggc
cagtggtacgggcccaacactgtcgcccaggtcctgaagaagcttgctgtcttcgatacg
tggagctccttggcggtccacattgcaatggacaacactgttgtgatggaggaaatcaga
aggttgtgcaggaccagcgttccctgtgcaggcgccactgcgtttcctgcagattccgac
cggcactgcaacggattccctgccggagctgaggtcaccaacaggccgtcgccatggaga
cccctggtacttctcattcccctgcgcctggggctcacggacatcaacgaggcctacgtg
gagacgctgaagcactgcttcatgatgccccagtccctgggcgtcatcggagggaagccc
aacagcgcccactacttcatcggctacgttggtgaggagctcatctacctggacccccac
accacgcagccagccgtggagcccactgatggctgcttcatcccggacgagagcttccac
tgccagcacccgccgtgccgcatgagcatcgcggagcttgacccgtccatcgctgtgggg
tttttctgtaagactgaagatgacttcaatgattggtgccagcaagtcaaaaagctgtct
ctgcttggaggtgccctgcccatgtttgagctggtggagctgcagccttcacatctggcc
tgccccgacgtcctgaacctgtccctagattcttctgatgtagagcgactggaaagattc
ttcgactcagaagatgaagactttgaaatcctgtccctttga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Network (4)   
   KEGG NETWORK (4)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (17)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (14)   
DNA sequence (48)   
   RefSeq(nuc) (14)   
   GenBank (17)   
   EMBL (17)   
3D Structure (7)   
   PDB (7)   
Protein domain (2)   
   Pfam (2)   
All databases (97)   

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