KEGG   Homo sapiens (human): 26038
Entry
26038             CDS       T01001                                 
Symbol
CHD5, CHD-5, PMNDS
Name
(RefSeq) chromodomain helicase DNA binding protein 5
  KO
K14435  chromodomain-helicase-DNA-binding protein 5 [EC:5.6.2.-]
Organism
hsa  Homo sapiens (human)
Disease
H02615  Parenti-Mignot neurodevelopmental syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    26038 (CHD5)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Chromatin remodeling factors
   Other chromatin remodeling factors
    26038 (CHD5)
SSDB
Motif
Pfam: SNF2-rel_dom CHDCT2 CHDII_SANT-like Helicase_C CHDNT PHD DUF1087 Chromo ResIII HDA2-3 DEAD PHD_2 AAA_22
Other DBs
NCBI-GeneID: 26038
NCBI-ProteinID: NP_056372
OMIM: 610771
HGNC: 16816
Ensembl: ENSG00000116254
UniProt: Q8TDI0
Structure
Position
1:complement(6101787..6180321)
AA seq 1954 aa
MRGPVGTEEELPRLFAEEMENEDEMSEEEDGGLEAFDDFFPVEPVSLPKKKKPKKLKENK
CKGKRKKKEGSNDELSENEEDLEEKSESEGSDYSPNKKKKKKLKDKKEKKAKRKKKDEDE
DDNDDGCLKEPKSSGQLMAEWGLDDVDYLFSEEDYHTLTNYKAFSQFLRPLIAKKNPKIP
MSKMMTVLGAKWREFSANNPFKGSSAAAAAAAVAAAVETVTISPPLAVSPPQVPQPVPIR
KAKTKEGKGPGVRKKIKGSKDGKKKGKGKKTAGLKFRFGGISNKRKKGSSSEEDEREESD
FDSASIHSASVRSECSAALGKKSKRRRKKKRIDDGDGYETDHQDYCEVCQQGGEIILCDT
CPRAYHLVCLDPELEKAPEGKWSCPHCEKEGIQWEPKDDDDEEEEGGCEEEEDDHMEFCR
VCKDGGELLCCDACPSSYHLHCLNPPLPEIPNGEWLCPRCTCPPLKGKVQRILHWRWTEP
PAPFMVGLPGPDVEPSLPPPKPLEGIPEREFFVKWAGLSYWHCSWVKELQLELYHTVMYR
NYQRKNDMDEPPPFDYGSGDEDGKSEKRKNKDPLYAKMEERFYRYGIKPEWMMIHRILNH
SFDKKGDVHYLIKWKDLPYDQCTWEIDDIDIPYYDNLKQAYWGHRELMLGEDTRLPKRLL
KKGKKLRDDKQEKPPDTPIVDPTVKFDKQPWYIDSTGGTLHPYQLEGLNWLRFSWAQGTD
TILADEMGLGKTVQTIVFLYSLYKEGHSKGPYLVSAPLSTIINWEREFEMWAPDFYVVTY
TGDKESRSVIRENEFSFEDNAIRSGKKVFRMKKEVQIKFHVLLTSYELITIDQAILGSIE
WACLVVDEAHRLKNNQSKFFRVLNSYKIDYKLLLTGTPLQNNLEELFHLLNFLTPERFNN
LEGFLEEFADISKEDQIKKLHDLLGPHMLRRLKADVFKNMPAKTELIVRVELSQMQKKYY
KFILTRNFEALNSKGGGNQVSLLNIMMDLKKCCNHPYLFPVAAVEAPVLPNGSYDGSSLV
KSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQ
EAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQN
KKVMIYRFVTRASVEERITQVAKRKMMLTHLVVRPGLGSKSGSMTKQELDDILKFGTEEL
FKDDVEGMMSQGQRPVTPIPDVQSSKGGNLAASAKKKHGSTPPGDNKDVEDSSVIHYDDA
AISKLLDRNQDATDDTELQNMNEYLSSFKVAQYVVREEDGVEEVEREIIKQEENVDPDYW
EKLLRHHYEQQQEDLARNLGKGKRIRKQVNYNDASQEDQEWQDELSDNQSEYSIGSEDED
EDFEERPEGQSGRRQSRRQLKSDRDKPLPPLLARVGGNIEVLGFNARQRKAFLNAIMRWG
MPPQDAFNSHWLVRDLRGKSEKEFRAYVSLFMRHLCEPGADGAETFADGVPREGLSRQHV
LTRIGVMSLVRKKVQEFEHVNGKYSTPDLIPEGPEGKKSGEVISSDPNTPVPASPAHLLP
APLGLPDKMEAQLGYMDEKDPGAQKPRQPLEVQALPAALDRVESEDKHESPASKERAREE
RPEETEKAPPSPEQLPREEVLPEKEKILDKLELSLIHSRGDSSELRPDDTKAEEKEPIET
QQNGDKEEDDEGKKEDKKGKFKFMFNIADGGFTELHTLWQNEERAAVSSGKIYDIWHRRH
DYWLLAGIVTHGYARWQDIQNDPRYMILNEPFKSEVHKGNYLEMKNKFLARRFKLLEQAL
VIEEQLRRAAYLNMTQDPNHPAMALNARLAEVECLAESHQHLSKESLAGNKPANAVLHKV
LNQLEELLSDMKADVTRLPSMLSRIPPVAARLQMSERSILSRLTNRAGDPTIQQGAFGSS
QMYSNNFGPNFRGPGPGGIVNYNQMPLGPYVTDI
NT seq 5865 nt   +upstreamnt  +downstreamnt
atgcggggcccagtgggcaccgaggaggagctgccgcggctgttcgccgaggagatggag
aatgaggacgagatgtcagaagaagaagatggtggtcttgaagccttcgatgactttttc
cctgtggagcccgtgagccttcctaagaagaagaaacccaagaagctcaaggaaaacaag
tgtaaagggaagcggaagaagaaagaggggagcaatgatgagctatcagagaatgaagag
gatctggaagagaagtcggagagtgaaggcagtgactactccccgaataaaaagaagaag
aagaaactcaaggacaagaaggagaaaaaagccaagcgaaaaaagaaggatgaggatgag
gatgataatgatgatggatgcttaaaggagcccaagtcctcggggcagctcatggccgag
tggggcctggacgacgtggactacctgttctcggaggaggattaccacacgctgaccaac
tacaaggccttcagccagttcctcaggccactcattgccaagaagaacccgaagatcccc
atgtccaaaatgatgaccgtcctgggtgccaagtggcgggagttcagcgccaacaacccc
ttcaagggcagctccgcggcagcagcggcggcggcggtggctgcggctgtagagacggtc
accatctcccctccgctagccgtcagccccccgcaggtgccccagcctgtgcctatccgc
aaggccaagaccaaggagggcaaagggcctggagtgaggaagaagatcaaaggctccaaa
gatgggaagaaaaagggcaaagggaaaaagacggccgggctcaagttccgcttcgggggg
atcagcaacaagaggaagaaaggctcctcgagtgaagaagatgagagggaggagtcggac
ttcgacagcgccagcatccacagtgcctccgtgcgctccgaatgctctgcagccctgggc
aagaagagcaagaggaggcgcaagaagaagaggattgatgatggtgacggctatgagaca
gaccaccaggattactgtgaggtgtgccagcagggtggggagatcatcctgtgcgacacc
tgcccgagggcctaccatctcgtatgcctggacccagagctggagaaggctcccgagggc
aagtggagctgcccccactgtgagaaggaggggatccagtgggagccgaaggacgacgac
gatgaagaggaggagggcggctgcgaggaggaggaggacgaccacatggagttctgccgc
gtgtgcaaggacgggggcgagctgctctgctgcgacgcctgcccctcctcctaccacctg
cattgcctcaacccgccgctgcccgagatcccaaacggtgaatggctctgcccgcgctgt
acttgccccccactgaagggcaaagtccagcggattctacactggaggtggacggagccc
cctgcccccttcatggtggggctgccggggcctgacgtggagcccagcctccctccacct
aagcccctggagggcatccctgagagagagttctttgtcaagtgggcagggctgtcctac
tggcattgctcctgggtgaaggagctacagctggagctgtaccacacggtgatgtatcgc
aactaccaaagaaagaacgacatggatgagccgcccccctttgactacggctctggggat
gaagacggcaagagcgagaagaggaagaacaaggaccccctctatgccaagatggaggag
cgcttctaccgctatggcatcaagccagagtggatgatgattcaccgaatcctgaaccat
agctttgacaagaagggggatgtgcactacctgatcaagtggaaagacctgccctacgac
cagtgcacctgggagatcgatgacatcgacatcccctactacgacaacctcaagcaggcc
tactggggccacagggagctgatgctgggagaagacaccaggctgcccaagaggctgctc
aagaagggcaagaagctgagggacgacaagcaggagaagccgccggacacgcccattgtg
gaccccacggtcaagttcgacaagcagccatggtacatcgactccacaggcggcacactg
cacccgtaccagctggagggcctcaactggctgcgcttctcttgggcccagggcactgac
accatcctggccgatgagatgggtctgggcaagacggtgcagaccatcgtgttcctttac
tccctctacaaggagggccactccaaagggccctacctggttagcgcgcccctctccacc
atcatcaactgggaacgcgagtttgagatgtgggcgcccgacttctacgtggtcacctac
acgggggacaaggagagccgctcggtgattcgggagaacgagttttcctttgaggacaac
gccattcggagtgggaagaaggtattccgtatgaagaaagaagtgcagatcaaattccac
gtgctgctcacctcctatgagctcatcaccattgaccaggccatcctgggctccatcgag
tgggcctgcctggtggtagatgaggcccaccgcctcaagaacaaccagtccaagtttttt
agggtcttaaacagctacaagattgattacaagctgctgctgacagggaccccccttcag
aacaacctggaggagctgttccatctcctcaacttcctgactccagagaggttcaacaac
ctggagggcttcctggaggagtttgctgacatctccaaggaagaccagatcaagaagctg
catgacctgctggggccgcacatgctcaggcggctcaaggctgacgtgttcaagaacatg
ccggccaagaccgagctcattgtccgggtggagctgagccagatgcagaagaagtactac
aagttcatcctcacacggaactttgaggcactgaactccaaggggggcgggaaccaagta
tcgctgctcaacatcatgatggacctgaaaaagtgctgcaaccacccctacctcttccct
gtggctgccgtggaggcccctgtcttgcccaatggctcctacgatggaagctccctggtc
aagtcttcagggaagctcatgctgctacagaagatgctgaagaaactgcgggatgagggg
caccgtgtgctcatcttctcccagatgaccaagatgctggacctcctggaggacttcctg
gagtacgaaggctacaagtatgagcggattgatggtggcatcaccgggggcctccggcag
gaggcaatcgacagattcaatgcccccggggcccagcagttctgcttcctcctctcaacc
cgggcaggtggtctgggcatcaacctggccacggcggacactgtcatcatctacgactcg
gactggaacccgcacaatgacatccaggccttcagccgcgcccaccgcatcggccagaac
aagaaggtgatgatctaccgcttcgtgactcgggcctcggtggaggagcgcatcacgcag
gtggccaagcgcaagatgatgctcacccacctggtggtgcggcccggcctcggctccaag
tcggggtccatgaccaagcaggagctggacgacatcctcaagttcggcacggaggaactc
ttcaaggacgacgtggagggcatgatgtctcagggccagaggccggtcacacccatccct
gatgtccagtcctccaaaggggggaacttggccgccagtgcaaagaagaagcacggtagc
accccgccaggtgacaacaaggacgtggaggacagcagtgtgatccactatgacgatgcg
gccatctccaagctgctggaccggaaccaggacgctacagatgacacggagctacagaac
atgaacgagtacctgagctccttcaaggtggcgcagtacgtggtgcgcgaggaggacggc
gtggaggaggtggagcgggaaatcatcaagcaggaggagaacgtggaccccgactactgg
gagaagctgctgcggcaccactatgagcagcagcaggaggacctggcccgcaacctgggc
aagggcaagcgcatccgcaagcaggtcaactacaacgatgcctcccaggaggaccaggag
tggcaggatgagctctctgataaccagtcagaatattccattggctctgaggatgaggat
gaggactttgaagagaggccggaagggcagagtggacgacgacaatcccggaggcagctg
aagagtgacagggacaagcccctgcccccgcttctcgcccgagttggtggcaacatcgag
gtgctgggcttcaatgcccgacagcggaaggcctttctgaacgccatcatgcgctggggc
atgcccccgcaggacgccttcaactcccactggctggtgcgggaccttcgagggaagagc
gagaaggagtttagagcctatgtgtccctcttcatgcggcacctgtgtgagccgggggcg
gatggtgcagagaccttcgcagacggcgtgccccgggagggcctctccaggcagcacgtg
ctgacccgcatcggggtcatgtcactagttaggaagaaggttcaggagtttgagcatgtc
aacgggaagtacagcaccccagacttgatccctgaggggcccgaggggaagaagtcgggc
gaggtgatctcctcggaccccaacacaccagtgcccgccagccctgcccacctcctgcca
gccccgctgggcctgccagacaaaatggaagcccagctgggctacatggatgagaaagac
cccggggcacagaagccaaggcagcccctggaagtccaggcccttccagccgccttggat
agagtggagagtgaggacaagcacgagagcccagccagcaaggagagagcccgagaggag
cggccagaggagacggagaaggccccgccctccccggagcagctgccgagagaggaggtg
cttcctgagaaggagaagatcctggacaagctggagctgagcttgatccacagcagaggg
gacagttccgaactcaggccagatgacaccaaggctgaggagaaggagcccattgaaaca
cagcaaaatggtgacaaagaggaagatgacgaggggaagaaggaggacaagaaggggaaa
ttcaagttcatgttcaacatcgcggacgggggcttcacggagttgcacacgctgtggcag
aacgaggagcgggctgctgtatcctctgggaaaatctacgacatctggcaccggcgccat
gactactggctgctggcgggcatcgtgacgcacggctacgcccgctggcaggacatccag
aatgacccacggtacatgatcctcaacgagcccttcaagtctgaggtccacaagggcaac
tacctggagatgaagaacaagttcctggcccgcaggtttaagctgctggagcaggcgttg
gtcattgaggagcagctccggagggccgcgtacctgaacatgacgcaggaccccaaccac
cccgccatggccctcaacgcccgcctggctgaagtggagtgcctcgccgagagccaccag
cacctgtccaaggagtcccttgctgggaacaagcctgccaatgccgtcctgcacaaggtc
ctgaaccagctggaggagctgctgagcgacatgaaggccgacgtgacccggctgccatcc
atgctgtcccgcatccccccggtggccgcccggctgcagatgtcggagcgcagcatcctg
agccgcctgaccaaccgcgccggggaccccaccatccagcagggcgctttcggctcctcc
cagatgtacagcaacaactttgggcccaacttccggggccctggaccgggagggattgtc
aactacaaccagatgcccctggggccctatgtgaccgatatctag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (17)   
   KEGG ORTHOLOGY (1)   
   RefGene (11)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (21)   
   RefSeq(nuc) (1)   
   GenBank (10)   
   EMBL (10)   
3D Structure (1)   
   PDB (1)   
Protein domain (13)   
   Pfam (13)   
All databases (61)   

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