KEGG   Homo sapiens (human): 287015
Entry
287015            CDS       T01001                                 
Symbol
TRIM42, PPP1R40, T4A1
Name
(RefSeq) tripartite motif containing 42
  KO
K12018  tripartite motif-containing protein 42
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:hsa01009]
    287015 (TRIM42)
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsa04121]
    287015 (TRIM42)
Protein phosphatases and associated proteins [BR:hsa01009]
 Protein serine/threonine phosphatases
  Phosphoprotein phosphatases (PPPs)
   Protein phosphatase-1
    PP1-interacting proteins (PIPs)
     287015 (TRIM42)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   TRIM/RBCC proteins
    287015 (TRIM42)
SSDB
Motif
Pfam: zf-B_box fn3 Pur_ac_phosph_N CHDCT2
Other DBs
NCBI-GeneID: 287015
NCBI-ProteinID: NP_689829
OMIM: 620334
HGNC: 19014
Ensembl: ENSG00000155890
UniProt: Q8IWZ5
Position
3:140678064..140701150
AA seq 723 aa
METAMCVCCPCCTWQRCCPQLCSCLCCKFIFTSERNCTCFPCPYKDERNCQFCHCTCSES
PNCHWCCCSWANDPNCKCCCTASSNLNCYYYESRCCRNTIITFHKGRLRSIHTSSKTALR
TGSSDTQVDEVKSIPANSHLVNHLNCPMCSRLRLHSFMLPCNHSLCEKCLRQLQKHAEVT
ENFFILICPVCDRSHCMPYSNKMQLPENYLHGRLTKRYMQEHGYLKWRFDRSSGPILCQV
CRNKRIAYKRCITCRLNLCNDCLKAFHSDVAMQDHVFVDTSAEEQDEKICIHHPSSRIIE
YCRNDNKLLCTFCKFSFHNGHDTISLIDACSERAASLFSAIAKFKAVRYEIDNDLMEFNI
LKNSFKADKEAKRKEIRNGFLKLRSILQEKEKIIMEQIENLEVSRQKEIEKYVYVTTMKV
NEMDGLIAYSKEALKETGQVAFLQSAKILVDQIEDGIQTTYRPDPQLRLHSINYVPLDFV
ELSSAIHELFPTGPKKVRSSGDSLPSPYPVHSETMIARKVTFSTHSLGNQHIYQRSSSML
SFSNTDKKAKVGLEACGRAQSATPAKPTDGLYTYWSAGADSQSVQNSSSFHNWYSFNDGS
VKTPGPIVIYQTLVYPRAAKVYWTCPAEDVDSFEMEFYEVITSPPNNVQMELCGQIRDIM
QQNLELHNLTPNTEYVFKVRAINDNGPGQWSDICKVVTPDGHGKNRAKWGLLKNIQSALQ
KHF
NT seq 2172 nt   +upstreamnt  +downstreamnt
atggaaactgctatgtgcgtttgctgtccatgttgtacatggcagagatgttgtcctcag
ttatgctcctgtctgtgctgcaagttcatcttcacctcagagcggaactgcacctgcttc
ccctgcccttacaaagatgagcggaactgccagttctgccactgcacctgttctgagagc
cccaactgccattggtgttgctgctcttgggccaatgatcccaactgtaagtgctgctgc
acagccagcagcaatctcaactgctactactatgagagccgctgctgccgcaataccatc
atcactttccacaagggccgcctcaggagcatccatacctcctccaagactgccctgcgc
actgggagcagcgatacccaggtggatgaagtaaagtcaataccagccaacagtcacctg
gtgaaccacctcaattgccccatgtgcagccggctgcgcctgcactcattcatgctgccc
tgcaaccacagcctgtgcgagaagtgcctgcggcagctgcagaagcacgccgaggtcacc
gagaacttcttcatcctcatctgcccagtgtgcgaccgctcgcactgcatgccctacagc
aacaagatgcagctgcccgagaactacctgcacgggcgtctcaccaagcgctacatgcag
gagcacggctacctcaagtggcgctttgaccgctcctccgggcccatcctctgccaggtc
tgccgcaacaagcgcatcgcttacaagcgctgcatcacctgccgcctcaacctgtgcaac
gactgcctcaaggccttccactcggatgtggccatgcaagaccacgtctttgtggacacc
agcgccgaggaacaggacgagaagatctgcatccaccacccatccagccgcatcatcgag
tactgccgcaatgacaacaaattgctctgcaccttctgcaagttctctttccacaatggc
cacgacaccattagcctcatcgacgcctgctccgagagggccgcctcactcttcagcgcc
atcgccaagttcaaagcagtccgatatgaaattgataatgacctaatggaattcaacatc
ttaaaaaacagctttaaagctgacaaggaggcaaagcgaaaagagatcagaaatggcttt
ctcaagttgcgcagcattcttcaggagaaagagaagatcatcatggagcagatagagaat
ctagaagtgtccaggcagaaggaaattgaaaaatatgtgtatgttacaaccatgaaagtg
aacgagatggatggtctgatcgcctactccaaggaagccctgaaggagactggccaggtg
gcattcctgcagtcagccaagatcctggtggaccagatcgaggacggcatccagaccacc
tacaggcctgacccacagctccggctgcactcaataaactacgtgcccttggactttgtt
gagctttccagtgccatccatgagctcttccccacagggcccaagaaggtacgctcctca
ggggactccctgccctccccctaccccgtgcactcagaaacaatgattgccaggaaggtc
actttcagcacccacagcctcggcaaccagcacatataccagcgaagctcctccatgttg
tccttcagcaacactgacaagaaggccaaggtgggtctggaggcctgtgggagagcccag
tcagccacccccgccaaacccacagacggcctctacacctactggagtgctggagcagac
agccagtctgtacagaacagcagcagcttccacaactggtactcattcaacgatggctct
gtgaagaccccaggcccaattgttatctaccagactctggtgtacccaagagctgccaag
gtttactggacatgtccagcagaagacgtggactcttttgagatggaattctatgaagtc
attacttctcctcctaacaacgtacaaatggagctctgtggacaaattcgggacataatg
cagcaaaatctggagctgcacaacctgacccccaacacagaatacgtgtttaaagttaga
gccatcaatgataatggtcctgggcaatggagtgatatctgcaaggtggtaacaccagat
ggacatgggaagaaccgagctaagtggggcctgctgaagaatatccagtctgccctccag
aagcacttctga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (99)   
   KEGG ORTHOLOGY (1)   
   RefGene (93)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (19)   
   RefSeq(nuc) (3)   
   GenBank (8)   
   EMBL (8)   
Protein domain (4)   
   Pfam (4)   
All databases (132)   

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