KEGG   Homo sapiens (human): 30813
Entry
30813             CDS       T01001                                 
Symbol
VSX1, CAASDS, KTCN, KTCN1, PPCD, PPCD1, PPD, RINX
Name
(RefSeq) visual system homeobox 1
  KO
K09335  visual system homeobox protein 1
Organism
hsa  Homo sapiens (human)
Disease
H00789  Keratoconus
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    30813 (VSX1)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Helix-turn-helix
   Homeo domain Paired-related
    30813 (VSX1)
SSDB
Motif
Pfam: Homeodomain Homeobox_KN
Other DBs
NCBI-GeneID: 30813
NCBI-ProteinID: NP_055403
OMIM: 605020
HGNC: 12723
Ensembl: ENSG00000100987
UniProt: Q9NZR4
Position
20:complement(25070880..25082141)
AA seq 365 aa
MTGRDSLSDGRTSSRALVPGGSPRGSRPRGFAITDLLGLEAELPAPAGPGQGSGCEGPAV
APCPGPGLDGSSLARGALPLGLGLLCGFGTQPPAAARAPCLLLADVPFLPPRGPEPAAPL
APSRPPPALGRQKRSDSVSTSDEDSQSEDRNDLKASPTLGKRKKRRHRTVFTAHQLEELE
KAFSEAHYPDVYAREMLAVKTELPEDRIQVWFQNRRAKWRKREKRWGGSSVMAEYGLYGA
MVRHCIPLPDSVLNSAEGGLLGSCAPWLLGMHKKSMGMIRKPGSEDKLAGLWGSDHFKEG
SSQSESGSQRGSDKVSPENGLEDVAIDLSSSARQETKKVHPGAGAQGGSNSTALEGPQPG
KVGAT
NT seq 1098 nt   +upstreamnt  +downstreamnt
atgaccggccgggactcgctttccgacgggcgcactagcagcagggcgctggtgcctggc
ggttcccctaggggctcgcgcccccggggcttcgccatcacggacctgctgggcttggag
gccgagctgccggcgcccgctggcccaggacagggatctggctgcgagggtccggcagtc
gcgccgtgcccgggcccggggcttgacggctccagcctggcgcgtggggccctaccgctg
ggactcggcctcctctgtggcttcggcacgcagccgccggcggccgctcgagcaccctgc
ctgctcctagcggacgtgccgttcctgccgcccaggggccccgagcccgctgccccgctg
gctcccagccgtccgccgcctgcgctcggccgccagaagcgcagcgacagcgtctccacg
tccgatgaggacagccagtctgaagacaggaatgacctaaaggcatcccccaccttgggc
aagaggaagaagcggcggcacaggacagttttcactgctcaccagctggaagagttggag
aaggcattcagcgaggcccactaccctgatgtgtatgcccgagaaatgctggctgtgaaa
actgagctccccgaagaccggatacaggtctggtttcaaaaccgcagggccaaatggcgc
aagcgggagaagcgctggggcggcagcagcgtgatggccgagtacgggctgtacggggcc
atggtgcgccactgcatcccgctgccagactccgtgctcaactccgccgagggcggcctg
ctgggctcctgcgcgccctggctcctggggatgcataaaaaatccatggggatgataagg
aagccaggaagtgaagataagttggcaggactctggggctctgaccacttcaaagaaggt
tctagccagagtgagtcaggatcacagagaggctcagataaagtgagccctgagaatggc
ttggaagatgtggctattgacctctccagctctgcccggcaggagaccaagaaagtgcac
cctggggctggtgctcaaggaggctccaactccacggcactggaggggccccagccaggg
aaggtgggagccacatga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (4)   
   KEGG DISEASE (1)   
   OMIM (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (20)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (39)   
   RefSeq(nuc) (13)   
   GenBank (13)   
   EMBL (13)   
Protein domain (2)   
   Pfam (2)   
All databases (78)   

Download RDF
DBGET integrated database retrieval system