KEGG   Homo sapiens (human): 51010
Entry
51010             CDS       T01001                                 
Symbol
EXOSC3, CGI-102, PCH1B, RRP40, Rrp40p, bA3J10.7, hRrp-40, p10
Name
(RefSeq) exosome component 3
  KO
K03681  exosome complex component RRP40
Organism
hsa  Homo sapiens (human)
Pathway
hsa03018  RNA degradation
Disease
H00897  Pontocerebellar hypoplasia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    51010 (EXOSC3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    51010 (EXOSC3)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     51010 (EXOSC3)
SSDB
Motif
Pfam: RRP40_S1 RRP40_N_mamm KH_6 RRP4_S1 Rrp40_N
Other DBs
NCBI-GeneID: 51010
NCBI-ProteinID: NP_057126
OMIM: 606489
HGNC: 17944
Ensembl: ENSG00000107371
UniProt: Q9NQT5
Structure
Position
9:complement(37779714..37785092)
AA seq 275 aa
MAEPASVAAESLAGSRARAARTVLGQVVLPGEELLLPEQEDAEGPGGAVERPLSLNARAC
SRVRVVCGPGLRRCGDRLLVTKCGRLRHKEPGSGSGGGVYWVDSQQKRYVPVKGDHVIGI
VTAKSGDIFKVDVGGSEPASLSYLSFEGATKRNRPNVQVGDLIYGQFVVANKDMEPEMVC
IDSCGRANGMGVIGQDGLLFKVTLGLIRKLLAPDCEIIQEVGKLYPLEIVFGMNGRIWVK
AKTIQQTLILANILEACEHMTSDQRKQIFSRLAES
NT seq 828 nt   +upstreamnt  +downstreamnt
atggccgaacctgcgtctgtcgcggctgaatctctcgcgggcagcagggcgcgcgctgca
cgcacagtactaggtcaggtggtgctcccgggtgaggagctgctcctgccggaacaggag
gacgcggaaggccctgggggtgcagtggagcgaccgttgagcctgaatgctagagcgtgc
tcgcgggtgcgcgttgtatgcggtccgggccttcggcgctgtggggaccgcctgctggtc
accaagtgcggccgcctccgtcacaaggagcccggcagtggcagcggcggcggtgtttac
tgggtggactctcagcagaagcggtatgttccagtaaaaggagaccatgtgattggcata
gtgacagctaaatctggagatatattcaaagttgatgttggagggagtgagccagcttct
ttgtcttacttgtcatttgaaggtgcaactaaaagaaacagaccaaatgtgcaggttgga
gatctcatctatggccagtttgtggttgctaataaagacatggaaccagagatggtctgt
attgacagctgtggacgagccaatggaatgggtgtcattggacaggatggtctgcttttt
aaagtgactctgggcttaattagaaagctattagctccagattgtgaaatcatacaggaa
gtgggaaaactctatccactggagatagtatttggaatgaatggaagaatatgggttaag
gcaaaaaccatccagcagactttaattttggcaaacattttagaagcttgtgaacacatg
acgtcagatcaaagaaaacagatcttctccagattggcagaaagttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (6)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (28)   
   RefSeq(nuc) (2)   
   GenBank (13)   
   EMBL (13)   
3D Structure (4)   
   PDB (4)   
Protein domain (5)   
   Pfam (5)   
All databases (60)   

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