KEGG   Homo sapiens (human): 51294
Entry
51294             CDS       T01001                                 
Symbol
PCDH12, DMJDS1, VE-cadherin-2, VECAD2
Name
(RefSeq) protocadherin 12
  KO
K16499  protocadherin delta 2
Organism
hsa  Homo sapiens (human)
Disease
H02487  Diencephalic-mesencephalic junction dysplasia syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    51294 (PCDH12)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Protocadherins
   51294 (PCDH12)
SSDB
Motif
Pfam: Cadherin Cadherin_2
Other DBs
NCBI-GeneID: 51294
NCBI-ProteinID: NP_057664
OMIM: 605622
HGNC: 8657
Ensembl: ENSG00000113555
UniProt: Q9NPG4
Position
5:complement(141943581..141958202)
AA seq 1184 aa
MMQLLQLLLGLLGPGGYLFLLGDCQEVTTLTVKYQVSEEVPSGTVIGKLSQELGREERRR
QAGAAFQVLQLPQALPIQVDSEEGLLSTGRRLDREQLCRQWDPCLVSFDVLATGDLALIH
VEIQVLDINDHQPRFPKGEQELEISESASLRTRIPLDRALDPDTGPNTLHTYTLSPSEHF
ALDVIVGPDETKHAELIVVKELDREIHSFFDLVLTAYDNGNPPKSGTSLVKVNVLDSNDN
SPAFAESSLALEIQEDAAPGTLLIKLTATDPDQGPNGEVEFFLSKHMPPEVLDTFSIDAK
TGQVILRRPLDYEKNPAYEVDVQARDLGPNPIPAHCKVLIKVLDVNDNIPSIHVTWASQP
SLVSEALPKDSFIALVMADDLDSGHNGLVHCWLSQELGHFRLKRTNGNTYMLLTNATLDR
EQWPKYTLTLLAQDQGLQPLSAKKQLSIQISDINDNAPVFEKSRYEVSTRENNLPSLHLI
TIKAHDADLGINGKVSYRIQDSPVAHLVAIDSNTGEVTAQRSLNYEEMAGFEFQVIAEDS
GQPMLASSVSVWVSLLDANDNAPEVVQPVLSDGKASLSVLVNASTGHLLVPIETPNGLGP
AGTDTPPLATHSSRPFLLTTIVARDADSGANGEPLYSIRSGNEAHLFILNPHTGQLFVNV
TNASSLIGSEWELEIVVEDQGSPPLQTRALLRVMFVTSVDHLRDSARKPGALSMSMLTVI
CLAVLLGIFGLILALFMSICRTEKKDNRAYNCREAESTYRQQPKRPQKHIQKADIHLVPV
LRGQAGEPCEVGQSHKDVDKEAMMEAGWDPCLQAPFHLTPTLYRTLRNQGNQGAPAESRE
VLQDTVNLLFNHPRQRNASRENLNLPEPQPATGQPRSRPLKVAGSPTGRLAGDQGSEEAP
QRPPASSATLRRQRHLNGKVSPEKESGPRQILRSLVRLSVAAFAERNPVEELTVDSPPVQ
QISQLLSLLHQGQFQPKPNHRGNKYLAKPGGSRSAIPDTDGPSARAGGQTDPEQEEGPLD
PEEDLSVKQLLEEELSSLLDPSTGLALDRLSAPDPAWMARLSLPLTTNYRDNVISPDAAA
TEEPRTFQTFGKAEAPELSPTGTRLASTFVSEMSSLLEMLLEQRSSMPVEAASEALRRLS
VCGRTLSLDLATSAASGMKVQGDPGGKTGTEGKSRGSSSSSRCL
NT seq 3555 nt   +upstreamnt  +downstreamnt
atgatgcaacttctgcaacttctgctggggcttttggggccaggtggctacttatttctt
ttaggggattgtcaggaggtgaccactctcacggtgaaataccaagtgtcagaggaagtg
ccatctggtacagtgatcgggaagctgtcccaggaactgggccgggaggagaggcggagg
caagctggggctgccttccaggtgttgcagctgcctcaggcgctccccattcaggtggac
tctgaggaaggcttgctcagcacaggcaggcggctggatcgagagcagctgtgccgacag
tgggatccctgcctggtttcctttgatgtgcttgccacaggggatttggctctgatccat
gtggagatccaagtgctggacatcaatgaccaccagccacggtttcccaaaggcgagcag
gagctggaaatctctgagagcgcctctctgcgaacccggatccccctggacagagctctt
gacccagacacaggccctaacaccctgcacacctacactctgtctcccagtgagcacttt
gccttggatgtcattgtgggccctgatgagaccaaacatgcagaactcatagtggtgaag
gagctggacagggaaatccattcattttttgatctggtgttaactgcctatgacaatggg
aacccccccaagtcaggtaccagcttggtcaaggtcaacgtcttggactccaatgacaat
agccctgcgtttgctgagagttcactggcactggaaatccaagaagatgctgcacctggt
acgcttctcataaaactgaccgccacagaccctgaccaaggccccaatggggaggtggag
ttcttcctcagtaagcacatgcctccagaggtgctggacaccttcagtattgatgccaag
acaggccaggtcattctgcgtcgacctctagactatgaaaagaaccctgcctacgaggtg
gatgttcaggcaagggacctgggtcccaatcctatcccagcccattgcaaagttctcatc
aaggttctggatgtcaatgacaacatcccaagcatccacgtcacatgggcctcccagcca
tcactggtgtcagaagctcttcccaaggacagttttattgctcttgtcatggcagatgac
ttggattcaggacacaatggtttggtccactgctggctgagccaagagctgggccacttc
aggctgaaaagaactaatggcaacacatacatgttgctaaccaatgccacactggacaga
gagcagtggcccaaatataccctcactctgttagcccaagaccaaggactccagccctta
tcagccaagaaacagctcagcattcagatcagtgacatcaacgacaatgcacctgtgttt
gagaaaagcaggtatgaagtctccacgcgggaaaacaacttaccctctcttcacctcatt
accatcaaggctcatgatgcagacttgggcattaatggaaaagtctcataccgcatccag
gactccccagttgctcacttagtagctattgactccaacacaggagaggtcactgctcag
aggtcactgaactatgaagagatggccggctttgagttccaggtgatcgcagaggacagc
gggcaacccatgcttgcatccagtgtctctgtgtgggtcagcctcttggatgccaatgat
aatgccccagaggtggtccagcctgtgctcagcgatggaaaagccagcctctccgtgctt
gtgaatgcctccacaggccacctgctggtgcccatcgagactcccaatggcttgggccca
gcgggcactgacacacctccactggccactcacagctcccggccattccttttgacaacc
attgtggcaagagatgcagactcgggggcaaatggagagcccctctacagcatccgcagt
ggaaatgaagcccacctcttcatcctcaaccctcatacggggcagctgttcgtcaatgtc
accaatgccagcagcctcattgggagtgagtgggagctggagatagtagtagaggaccag
ggaagcccccccttacagacccgagccctgttgagggtcatgtttgtcaccagtgtggac
cacctgagggactcagcccgcaagcctggggccttgagcatgtcgatgctgacggtgatc
tgcctggctgtactgttgggcatcttcgggttgatcctggctttgttcatgtccatctgc
cggacagaaaagaaggacaacagggcctacaactgtcgggaggccgagtccacctaccgc
cagcagcccaagaggccccagaaacacattcagaaggcagacatccacctcgtgcctgtg
ctcaggggtcaggcaggtgagccttgtgaagtcgggcagtcccacaaagatgtggacaag
gaggcgatgatggaagcaggctgggacccctgcctgcaggcccccttccacctcaccccg
accctgtacaggacgctgcgtaatcaaggcaaccagggagcaccggcggagagccgagag
gtgctgcaagacacggtcaacctccttttcaaccatcccaggcagaggaatgcctcccgg
gagaacctgaaccttcccgagccccagcctgccacaggccagccacgttccaggcctctg
aaggttgcaggcagccccacagggaggctggctggagaccagggcagtgaggaagcccca
cagaggccaccagcctcctctgcaaccctgagacggcagcgacatctcaatggcaaagtg
tcccctgagaaagaatcagggccccgtcagatcctgcggagcctggtccggctgtctgtg
gctgccttcgccgagcggaaccccgtggaggagctcactgtggattctcctcctgttcag
caaatctcccagctgctgtccttgctgcatcagggccaattccagcccaaaccaaaccac
cgaggaaataagtacttggccaagccaggaggcagcaggagtgcaatcccagacacagat
ggcccaagtgcaagggctggaggccagacagacccagaacaggaggaagggcctttggat
cctgaagaggacctctctgtgaagcaactgctagaagaagagctgtcaagtctgctggac
cccagcacaggtctggccctggaccggctgagcgcccctgacccggcctggatggcgaga
ctctctttgcccctcaccaccaactaccgtgacaatgtgatctccccggatgctgcagcc
acggaggagccaaggaccttccagacgttcggcaaggcagaggcaccagagctgagccca
acaggcacgaggctggccagcacctttgtctcggagatgagctcactgctggagatgctg
ctggaacagcgctccagcatgcccgtggaggccgcctccgaggcgctgcggcggctctcg
gtctgcgggaggaccctcagtttagacttggccaccagtgcagcctcaggcatgaaagtg
caaggggacccaggtggaaagacggggactgagggcaagagcagaggcagcagcagcagc
agcaggtgcctgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (26)   
   RefSeq(nuc) (2)   
   GenBank (12)   
   EMBL (12)   
Protein domain (2)   
   Pfam (2)   
All databases (56)   

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