KEGG   Homo sapiens (human): 5356
Entry
5356              CDS       T01001                                 
Symbol
PLRG1, Cwc1, PRL1, PRP46, PRPF46, TANGO4
Name
(RefSeq) pleiotropic regulator 1
  KO
K12862  pleiotropic regulator 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    5356 (PLRG1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    5356 (PLRG1)
   03400 DNA repair and recombination proteins [BR:hsa03400]
    5356 (PLRG1)
Spliceosome [BR:hsa03041]
 Complex B
  Other components
   Prp19 complex
    5356 (PLRG1)
 Complex C
   Prp19-CDC5 complex
    5356 (PLRG1)
DNA repair and recombination proteins [BR:hsa03400]
 Eukaryotic type
  Other factors with a suspected DNA repair function
   PSO4 complex
    5356 (PLRG1)
SSDB
Motif
Pfam: WD40 NBCH_WD40 ANAPC4_WD40 Nucleoporin_N WDR54 WD40_like
Other DBs
NCBI-GeneID: 5356
NCBI-ProteinID: NP_002660
OMIM: 605961
HGNC: 9089
Ensembl: ENSG00000171566
UniProt: O43660
Structure
Position
4:complement(154535005..154550400)
AA seq 514 aa
MVEEVQKHSVHTLVFRSLKRTHDMFVADNGKPVPLDEESHKRKMAIKLRNEYGPVLHMPT
SKENLKEKGPQNATDSYVHKQYPANQGQEVEYFVAGTHPYPPGPGVALTADTKIQRMPSE
SAAQSLAVALPLQTKADANRTAPSGSEYRHPGASDRPQPTAMNSIVMETGNTKNSALMAK
KAPTMPKPQWHPPWKLYRVISGHLGWVRCIAVEPGNQWFVTGSADRTIKIWDLASGKLKL
SLTGHISTVRGVIVSTRSPYLFSCGEDKQVKCWDLEYNKVIRHYHGHLSAVYGLDLHPTI
DVLVTCSRDSTARIWDVRTKASVHTLSGHTNAVATVRCQAAEPQIITGSHDTTIRLWDLV
AGKTRVTLTNHKKSVRAVVLHPRHYTFASGSPDNIKQWKFPDGSFIQNLSGHNAIINTLT
VNSDGVLVSGADNGTMHLWDWRTGYNFQRVHAAVQPGSLDSESGIFACAFDQSESRLLTA
EADKTIKVYREDDTATEETHPVSWKPEIIKRKRF
NT seq 1545 nt   +upstreamnt  +downstreamnt
atggtcgaggaggtacagaaacattctgtacacacccttgtgttcaggtcgttgaagagg
acccatgacatgtttgtagctgataatggaaaacctgtgcctttagatgaagagagtcac
aaacgaaaaatggcaatcaagcttcgtaatgagtatggtcctgtgttgcatatgcctact
tcaaaagaaaatcttaaagagaagggtcctcagaatgcaacggattcatatgttcataaa
cagtaccctgccaatcaaggacaagaagttgaatactttgtggcaggtacacatccatac
ccaccaggacctggggttgctttgacagcagatactaagatccagagaatgccaagtgaa
tcagctgcacagtccttagcggtggcattacctttgcagaccaaggctgatgcaaatcgt
actgcccctagtggaagtgaataccgacatcctggggcttctgaccgtccacagcctaca
gcgatgaattcaattgtcatggagactggcaataccaagaactctgcactgatggctaaa
aaagcccctacaatgccaaaaccccagtggcacccaccgtggaaactctacagggttatc
agtgggcatcttggctgggttcgatgtattgctgtggaacctggaaatcagtggtttgtt
actggatctgctgacagaactataaagatctgggacttggctagtggcaaattaaaactg
tcattgactgggcatattagtactgtgcggggcgtgatagtaagcacaaggagcccatat
ctgttctcttgtggagaagacaaacaagtgaaatgctgggatctcgaatacaataaggtt
atacggcattatcatggacatttaagtgcagtgtatggtttggatttgcacccgacaatc
gatgtgttggtaacctgtagtcgagattcaactgcacggatttgggatgtgagaactaaa
gccagtgtacacacattatctggacatacaaatgcagttgctacagtgagatgtcaggct
gcagaaccacaaattattacaggaagccatgatactacaattcgattatgggatctggtg
gctggaaaaacaagagtgacattaacaaatcacaaaaaatcagttagggctgtggtttta
catccaagacattacacatttgcatctggttctccagataacataaagcagtggaaattc
cctgatggaagtttcattcaaaatctttccggtcataatgctattattaacacattgacg
gtaaattctgatggagtgcttgtatctggagctgacaatggcaccatgcatctttgggac
tggagaactggctacaattttcagagagttcacgcagctgtgcaacctgggtctttggac
agtgaatcaggaatatttgcttgtgcttttgatcagtctgaaagtcgattactaacagct
gaagctgataaaaccattaaagtatacagagaggatgacacagccacagaagaaactcat
ccagtcagctggaaaccagaaattatcaagagaaagagattttaa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (12)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (20)   
   RefSeq(nuc) (2)   
   GenBank (9)   
   EMBL (9)   
3D Structure (26)   
   PDB (26)   
Protein domain (6)   
   Pfam (6)   
All databases (74)   

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