KEGG   Homo sapiens (human): 54941
Entry
54941             CDS       T01001                                 
Symbol
RNF125, TNORS, TRAC-1, TRAC1
Name
(RefSeq) ring finger protein 125
  KO
K12170  E3 ubiquitin-protein ligase RNF125 [EC:2.3.2.27]
Organism
hsa  Homo sapiens (human)
Pathway
hsa04622  RIG-I-like receptor signaling pathway
Network
nt06519  RLR signaling
  Element
N01564  Post-translational modifications of RIG-I and MDA5
Disease
H01806  Tenorio syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09151 Immune system
   04622 RIG-I-like receptor signaling pathway
    54941 (RNF125)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:hsa04121]
    54941 (RNF125)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     54941 (RNF125)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    54941 (RNF125)
SSDB
Motif
Pfam: zf_C2HC_14 zf-C3HC4_2 zf-RING_UBOX zf-Di19 zf-C3HC4 zf-C3HC4_4 zf-RING_2 zf-C3HC4_3 zf-RING_5 TRAF3_RING zf-Nse U-box zf-RING_10 Prok-RING_4 zf-RING_6 zf-rbx1
Other DBs
NCBI-GeneID: 54941
NCBI-ProteinID: NP_060301
OMIM: 610432
HGNC: 21150
Ensembl: ENSG00000101695
UniProt: Q96EQ8
Structure
Position
18:32018825..32088144
AA seq 232 aa
MGSVLSTDSGKSAPASATARALERRRDPELPVTSFDCAVCLEVLHQPVRTRCGHVFCRSC
IATSLKNNKWTCPYCRAYLPSEGVPATDVAKRMKSEYKNCAECDTLVCLSEMRAHIRTCQ
KYIDKYGPLQELEETAARCVCPFCQRELYEDSLLDHCITHHRSERRPVFCPLCRLIPDEN
PSSFSGSLIRHLQVSHTLFYDDFIDFNIIEEALIRRVLDRSLLEYVNHSNTT
NT seq 699 nt   +upstreamnt  +downstreamnt
atgggctccgtgctgagcaccgacagcggcaaatcggcgcccgcctctgccaccgcgcgg
gccctggagcgcaggagggacccggagttgcccgtcacgtccttcgactgcgccgtgtgc
cttgaggtgttacaccagcctgtccggacccgctgtggccacgtattctgccgttcctgt
attgctaccagtctaaagaacaacaagtggacctgtccttattgccgggcatatcttcct
tcagaaggagttccagcaactgatgtagccaaaagaatgaaatcagagtataagaactgc
gctgagtgtgacaccctggtttgcctcagtgaaatgagggcacatattcggacttgtcag
aagtacatagataagtatggaccactacaagaacttgaggagacagcagcaaggtgtgta
tgtcccttttgtcagagggaactgtatgaagacagcttgctggatcattgtattactcat
cacagatcggaacggaggcctgtgttctgtccactttgccgtttaatacccgatgagaat
ccaagcagcttcagtggcagtttaataagacatctgcaagttagtcacactttgttttat
gatgatttcatagattttaatataattgaggaagctcttatccgaagagtcttagaccgg
tcacttcttgaatatgtgaatcactcgaacaccacataa

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Network (2)   
   KEGG NETWORK (2)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (10)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (8)   
DNA sequence (22)   
   RefSeq(nuc) (8)   
   GenBank (7)   
   EMBL (7)   
3D Structure (3)   
   PDB (3)   
Protein domain (16)   
   Pfam (16)   
All databases (78)   

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