KEGG   Homo sapiens (human): 55183
Entry
55183             CDS       T01001                                 
Symbol
RIF1
Name
(RefSeq) replication timing regulatory factor 1
  KO
K11138  telomere-associated protein RIF1
Organism
hsa  Homo sapiens (human)
Pathway
hsa04550  Signaling pathways regulating pluripotency of stem cells
Network
nt06506  Double-strand break repair
  Element
N01445  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04550 Signaling pathways regulating pluripotency of stem cells
    55183 (RIF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:hsa03032]
    55183 (RIF1)
DNA replication proteins [BR:hsa03032]
 Eukaryotic type
  DNA Replication Termination Factors
   Other termination factors
    55183 (RIF1)
SSDB
Motif
Pfam: Rif1_N NICE-1
Other DBs
NCBI-GeneID: 55183
NCBI-ProteinID: NP_060621
OMIM: 608952
HGNC: 23207
Ensembl: ENSG00000080345
UniProt: Q5UIP0
Position
2:151409902..151534435
AA seq 2472 aa
MTARGQSPLAPLLETLEDPSASHGGQTDAYLTLTSRMTGEEGKEVITEIEKKLPRLYKVL
KTHISSQNSELSSAALQALGFCLYNPKITSELSEANALELLSKLNDTIKNSDKNVRTRAL
WVISKQTFPSEVVGKMVSSIIDSLEILFNKGETHSAVVDFEALNVIVRLIEQAPIQMGEE
AVRWAKLVIPLVVHSAQKVHLRGATALEMGMPLLLQKQQEIASITEQLMTTKLISELQKL
FMSKNETYVLKLWPLFVKLLGRTLHRSGSFINSLLQLEELGFRSGAPMIKKIAFIAWKSL
IDNFALNPDILCSAKRLKLLMQPLSSIHVRTETLALTKLEVWWYLLMRLGPHLPANFEQV
CVPLIQSTISIDSNASPQGNSCHVATSPGLNPMTPVHKGASSPYGAPGTPRMNLSSNLGG
MATIPSIQLLGLEMLLHFLLGPEALSFAKQNKLVLSLEPLEHPLISSPSFFSKHANTLIT
AVHDSFVAVGKDAPDVVVSAIWKELISLVKSVTESGNKKEKPGSEVLTLLLKSLESIVKS
EVFPVSKTLVLMEITIKGLPQKVLGSPAYQVANMDILNGTPALFLIQLIFNNFLECGVSD
ERFFLSLESLVGCVLSGPTSPLAFSDSVLNVINQNAKQLENKEHLWKMWSVIVTPLTELI
NQTNEVNQGDALEHNFSAIYGALTLPVNHIFSEQRFPVATMKTLLRTWSELYRAFARCAA
LVATAEENLCCEELSSKIMSSLEDEGFSNLLFVDRIIYIITVMVDCIDFSPYNIKYQPKV
KSPQRPSDWSKKKNEPLGKLTSLFKLIVKVIYSFHTLSFKEAHSDTLFTIGNSITGIISS
VLGHISLPSMIRKIFATLTRPLALFYENSKLDEVPKVYSCLNNKLEKLLGEIIACLQFSY
TGTYDSELLEQLSPLLCIIFLHKNKQIRKQSAQFWNATFAKVMMLVYPEELKPVLTQAKQ
KFLLLLPGLETVEMMEESSGPYSDGTENSQLNVKISGMERKSNGKRDSFLAQTKNKKENM
KPAAKLKLESSSLKVKGEILLEEEKSTDFVFIPPEGKDAKERILTDHQKEVLKTKRCDIP
AMYNNLDVSQDTLFTQYSQEEPMEIPTLTRKPKEDSKMMITEEQMDSDIVIPQDVTEDCG
MAEHLEKSSLSNNECGSLDKTSPEMSNSNNDERKKALISSRKTSTECASSTENSFVVSSS
SVSNTTVAGTPPYPTSRRQTFITLEKFDGSENRPFSPSPLNNISSTVTVKNNQETMIKTD
FLPKAKQREGTFSKSDSEKIVNGTKRSSRRAGKAEQTGNKRSKPLMRSEPEKNTEESVEG
IVVLENNPPGLLNQTECVSDNQVHLSESTMEHDNTKLKAATVENAVLLETNTVEEKNVEI
NLESKENTPPVVISADQMVNEDSQVQITPNQKTLRRSSRRRSEVVESTTESQDKENSHQK
KERRKEEEKPLQKSPLHIKDDVLPKQKLIAEQTLQENLIEKGSNLHEKTLGETSANAETE
QNKKKADPENIKSEGDGTQDIVDKSSEKLVRGRTRYQTRRASQGLLSSIENSESDSSEAK
EEGSRKKRSGKWKNKSNESVDIQDQEEKVVKQECIKAENQSHDYKATSEEDVSIKSPICE
KQDESNTVICQDSTVTSDLLQVPDDLPNVCEEKNETSKYAEYSFTSLPVPESNLRTRNAI
KRLHKRDSFDNCSLGESSKIGISDISSLSEKTFQTLECQHKRSRRVRRSKGCDCCGEKSQ
PQEKSLIGLKNTENNDVEISETKKADVQAPVSPSETSQANPYSEGQFLDEHHSVNFHLGL
KEDNDTINDSLIVSETKSKENTMQESLPSGIVNFREEICDMDSSEAMSLESQESPNENFK
TVGPCLGDSKNVSQESLETKEEKPEETPKMELSLENVTVEGNACKVTESNLEKAKTMELN
VGNEASFHGQERTKTGISEEAAIEENKRNDDSEADTAKLNAKEVATEEFNSDISLSDNTT
PVKLNAQTEISEQTAAGELDGGNDVSDLHSSEETNTKMKNNEEMMIGEAMAETGHDGETE
NEGITTKTSKPDEAETNMLTAEMDNFVCDTVEMSTEEGIIDANKTETNTEYSKSEEKLDN
NQMVMESDILQEDHHTSQKVEEPSQCLASGTAISELIIEDNNASPQKLRELDPSLVSAND
SPSGMQTRCVWSPLASPSTSILKRGLKRSQEDEISSPVNKVRRVSFADPIYQAGLADDID
RRCSIVRSHSSNSSPIGKSVKTSPTTQSKHNTTSAKGFLSPGSRSPKFKSSKKCLISEMA
KESIPCPTESVYPPLVNCVAPVDIILPQITSNMWARGLGQLIRAKNIKTIGDLSTLTASE
IKTLPIRSPKVSNVKKALRIYHEQQVKTRGLEEIPVFDISEKTVNGIENKSLSPDEERLV
SDIIDPVALEIPLSKNLLAQISALALQLDSEDLHNYSGSQLFEMHEKLSCMANSVIKNLQ
SRWRSPSHENSI
NT seq 7419 nt   +upstreamnt  +downstreamnt
atgacggccaggggtcagagccccctcgcgccgctgttggagactttggaagacccttct
gcctcccatggagggcagactgacgcttacctgactctgaccagtcgtatgactggagaa
gaaggaaaagaagtaattacagaaattgagaaaaaacttcctcggctgtacaaagtttta
aagactcacatttccagtcaaaactcggagctgagtagtgctgctctacaagccctgggg
ttttgcttatataatcccaaaattacctcagaattatcagaggcaaatgctctagaattg
ctttcaaaattgaatgataccattaagaattcagacaaaaatgtacgtactagagcactt
tgggtgatatctaagcagacatttccctctgaagtggttggcaaaatggtatccagtata
attgattcattagaaatactgtttaacaaaggagagacgcattctgctgttgttgatttt
gaagcattaaatgttatcgtaaggctaattgaacaagccccaattcaaatgggagaagag
gcagtgaggtgggcaaaactggtcatacctttagtggttcattcagcacaaaaggtacat
ttgcggggagcaactgctctggagatgggaatgccattattgcttcagaaacagcaagaa
atagcatctattacggagcagcttatgactactaaattaatctcagaacttcagaagcta
tttatgagtaaaaatgagacttacgtgttaaaattatggcctttgtttgtcaaactactt
ggaaggaccttgcatcgaagtgggagtttcatcaattctctcttgcaactagaagaactt
ggatttcgtagtggagcacccatgattaaaaagatagcttttattgcttggaagagttta
atagataattttgctttaaatccagatatactatgtagtgcaaaaagactcaagttgtta
atgcagcctttgagttccatccatgtgagaacagaaactctagcattaacaaaactagaa
gtctggtggtatttactgatgagacttggacctcatcttcctgctaattttgaacaggtt
tgtgtgcctctgattcaaagtacaataagcattgattctaatgcctcacctcagggcaat
tcgtgtcatgtagctacatctccaggtttaaatcctatgactcctgtacacaaaggtgct
tcctccccgtacggagccccgggaactccccgaatgaacctgagttcgaatttaggtgga
atggccacaatcccatccattcaacttttgggacttgaaatgttgcttcatttcttgttg
ggtccagaagccttgagttttgctaagcaaaataaacttgtgctgagcttagagccattg
gaacatccgttaatcagcagcccttcctttttttccaaacatgcaaatacacttatcact
gctgttcatgatagctttgttgcagttggaaaagatgcccccgatgtggttgtcagtgct
atctggaaggagctaattagcttggtgaagtcagttactgaatcaggtaacaaaaaagag
aaaccaggttctgaagttttgactctcttattaaagtctttggaaagcatagtaaagtct
gaagtatttcctgtatcaaaaacgctggtcctcatggaaattacaattaaaggacttcct
cagaaagtattaggttcaccagcatatcaggttgctaatatggatattcttaatggaact
ccagctttgttcttaattcaattaattttcaacaatttcttggaatgtggtgtatcagat
gaaaggttctttctcagtttggaatcacttgtaggctgtgttctttctggtccaacttca
ccactagctttcagtgactcagttttaaatgttattaatcaaaatgcaaagcagttggaa
aataaggagcatctctggaaaatgtggagtgttatagtcaccccattaactgaattgatt
aatcagaccaatgaagtaaatcaaggtgatgccttagaacataattttagtgccatctat
ggtgcattgactttaccagtaaaccacattttttcagaacagagatttccagtggccacc
atgaagactttgcttagaacttggtcagaattatatagagcatttgctcgttgtgctgct
ttggtggcaacagcagaagagaacttgtgctgtgaggaactttcttccaagataatgtcc
agtttggaagatgaaggcttttctaatttgttgttcgtggatagaattatttatattatt
actgtaatggttgattgcattgacttctcaccatataatattaaatatcagcccaaagtt
aaatcaccacagagaccttcagattggtccaaaaagaagaatgagcccctagggaaattg
acttctttatttaaacttattgtgaaagtgatctattctttccacacactgagcttcaag
gaagcacattctgataccctcttcactattggcaactcaatcaccggcattatttccagt
gtacttgggcatatttctttgccttctatgatccgaaaaatatttgcaactttaacaaga
cctctggcattattttatgaaaactcaaagcttgatgaagttcctaaagtatatagttgt
ctgaacaacaagttagaaaagctactgggagaaattattgcttgtctgcaattcagctac
accggaacttatgatagtgaacttcttgaacaactctccccactattatgcataatattt
ctgcacaagaataaacagattcgaaaacagagtgctcagttctggaatgccacttttgcc
aaagtgatgatgttggtttatcctgaagagttaaaaccagtactaacacaagccaaacaa
aaatttctgctcctgttgcctggtttggaaactgttgaaatgatggaggaatccagtgga
ccatattctgatggaacagaaaattcacaactaaatgtgaagataagtggcatggagaga
aaatcaaatggaaaaagagattcatttttggcacaaacaaagaataaaaaagaaaatatg
aaaccagcagccaaactgaaacttgaatcttcgtctttaaaagtaaagggtgaaattctt
ttggaagaggaaaagtctactgactttgtgtttatacctccagaaggaaaagatgcaaag
gaaagaatattaactgatcatcaaaaagaagttctcaaaacaaagcggtgtgatattcct
gccatgtataataatctggatgtttcccaagataccttatttactcagtatagtcaggaa
gagcctatggaaattcctactttaaccagaaaaccaaaggaggattctaagatgatgatt
acggaggagcaaatggacagtgacattgtcattcctcaagatgtcacggaagactgtggt
atggctgaacatcttgaaaagtcctccctttcgaataatgagtgtggttctcttgacaaa
accagtccagaaatgtcaaacagtaataatgatgaaagaaaaaaagctttaatttcatca
aggaaaacatcaactgaatgtgcatctagtacagaaaattctttcgttgtcagcagtagt
tcagtttctaataccactgttgctggaactcccccataccctacaagtcggaggcaaacc
tttattactttggagaagtttgatggttcagaaaatagaccttttagtccatcccccttg
aataatatttcatcaactgttacagtgaaaaataaccaggaaaccatgattaaaacagat
tttctaccaaaagcaaagcaaagagaagggactttttcaaaatctgattctgaaaaaata
gtgaatggaactaagagatcaagccggagagctggtaaagctgaacaaacagggaataaa
aggtctaagcccttaatgagatctgagccggagaaaaatactgaggaatctgttgaaggc
attgtagtcttagaaaataacccacctggtttgcttaatcaaacagaatgtgtgtcagat
aatcaggttcatctttctgaatctacaatggagcatgacaatacaaagcttaaagcagca
acagtggaaaatgctgtattattggaaactaatactgtagaggagaaaaatgtagaaatt
aatttggaatccaaagagaatacacccccagtagtaatatcagcagatcaaatggtaaat
gaggatagtcaggttcagataactccaaatcagaaaacccttagacggtcttcaaggcga
cgttcagaagtagtagagtctaccactgaaagccaagataaggaaaatagtcatcaaaaa
aaggaacgacgtaaggaagaagaaaaacctcttcagaagagtccattgcatataaaagat
gatgtgttacctaaacaaaaactgattgctgaacaaactctacaggagaatttaattgag
aaaggaagtaatttacatgagaagactcttggggaaactagtgctaatgcagaaactgaa
caaaataaaaaaaaggcagaccctgagaacattaagtctgagggggatggtacccaggac
attgtagataagtcctctgagaaactagtcagaggccgaacacggtatcaaactagaaga
gcatctcagggtttgctttccagcattgaaaactcagaatctgatagttcggaggcaaaa
gaagaaggttctaggaagaagagatctggaaaatggaaaaacaaaagcaatgaaagtgtt
gacattcaagatcaagaagagaaagtggtgaaacaggaatgtataaaagctgaaaatcag
tcacatgattataaagcaacttctgaagaagatgtaagcataaaatctccgatttgcgaa
aaacaagatgaaagtaatactgtaatatgtcaggattctacagtaacttcagatttgttg
caagttcctgatgatttaccaaatgtgtgtgaggaaaaaaatgaaactagcaaatatgca
gaatattcctttacaagtctacctgtgccagaatcaaatctaaggactagaaatgccatt
aagagattacataagcgagactcttttgataattgtagtttgggagaatcctcaaaaata
gggatatcagatatttcttcgctttcagaaaaaacttttcaaacacttgaatgccaacac
aagagaagtaggagggtgaggagatctaaaggttgtgattgctgtggggaaaaatcacaa
cctcaggaaaagtcactcattgggttaaagaatacagaaaataatgacgtagagattagt
gaaacaaaaaaggcagatgtgcaagcacctgtaagcccatcagaaacttctcaagctaat
ccatattctgaaggacaatttttagatgaacatcatagtgtgaattttcatttgggtctc
aaagaggataatgatactattaatgattcattaattgtttctgaaaccaaatcaaaagaa
aacactatgcaagaatctcttccttctggaatagtaaactttagagaggaaatttgtgat
atggattctagtgaagcaatgtctcttgaaagccaggagtcacctaatgaaaattttaaa
actgttggcccgtgtttaggagactcgaaaaatgtttcacaggaatctttggagacaaaa
gaagaaaaaccagaagaaaccccaaaaatggaactgagtctagagaatgttactgttgaa
ggaaatgcatgtaaagtaacagaatccaatctagagaaagcaaaaactatggaattgaat
gtaggaaatgaagctagctttcatggacaagagagaaccaaaactggtatttctgaagaa
gcagcaatagaagaaaataaaagaaatgatgactctgaagcagacacagctaaactgaat
gccaaagaagtagcaactgaggaatttaattcagatattagtctttctgataatactaca
cctgtaaaattgaatgctcaaactgagatttctgaacaaacagcagctggggaactagat
ggaggaaatgatgtatctgatctacactcatctgaagaaacgaataccaaaatgaaaaat
aatgaagaaatgatgatcggcgaggcaatggctgaaactggccatgatggtgaaacagag
aatgagggcataactaccaaaacctcaaagcctgatgaagctgaaacaaacatgttgact
gcagaaatggacaactttgtttgtgacacagttgaaatgagcactgaagaaggaatcatt
gacgctaataaaactgaaacaaatactgagtatagtaaatctgaagaaaaattagataac
aatcaaatggtaatggaaagtgatattttacaggaagatcaccatacttcacagaaagtg
gaggaaccatcacagtgtctggcatctggaacagctatctctgagctaataatagaagac
aataatgcatctcctcaaaaactaagggaacttgatccttcacttgtgtcagcaaatgac
agtcctagtggcatgcagacacgctgtgtctggtctcctttggcttctccgtctacgagc
attttaaagagaggactaaaaagatcccaagaagatgaaatctcatcacctgttaataag
gttcgccgtgtctcctttgcagatccaatataccaagcaggattggcagatgacattgat
agacggtgctctattgttaggtcccattcttccaatagttctcccataggaaaaagtgtt
aaaacttctcctactacacaatctaagcataataccacttcagccaaaggatttctgtcc
ccaggatcacgtagccctaaatttaagagctcaaagaagtgtttaatttcagaaatggcc
aaagaatccataccatgcccaacagaaagtgtttacccaccattggtgaactgtgtggca
ccagttgacatcattttacctcagattacatcaaacatgtgggcaagaggcctgggacaa
ctcattagagctaagaatataaaaactattggtgatttgagtactcttacagcatctgaa
ataaaaactcttcctatccgttctccaaaagtgtccaatgtaaaaaaggctctcagaata
tatcatgagcagcaggtgaagactcgtggactagaagagattccagtttttgatatttct
gaaaaaacagtaaatggaatagaaaataaatctttgtcacctgatgaagaaagacttgtc
tcagatataattgatcctgttgctttagaaattccattatccaaaaaccttctggcacag
attagtgctcttgctcttcagctggattcagaagatcttcataattattcaggaagccaa
ctatttgaaatgcacgagaaactaagttgtatggcaaactctgtaataaaaaatctacag
tcacgttggagatcaccatcccatgaaaattctatttag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Network (2)   
   KEGG NETWORK (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (46)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (10)   
   OC (1)   
Protein sequence (56)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (54)   
DNA sequence (132)   
   RefSeq(nuc) (92)   
   GenBank (20)   
   EMBL (20)   
Protein domain (2)   
   Pfam (2)   
All databases (243)   

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