KEGG   Homo sapiens (human): 56098
Entry
56098             CDS       T01001                                 
Symbol
PCDHGC4, NEDGS, PCDH-GAMMA-C4
Name
(RefSeq) protocadherin gamma subfamily C, 4
  KO
K16497  protocadherin gamma subfamily C
Organism
hsa  Homo sapiens (human)
Disease
H02461  Neurodevelopmental disorder with microcephaly
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    56098 (PCDHGC4)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Protocadherins
   56098 (PCDHGC4)
SSDB
Motif
Pfam: Cadherin Cadherin_tail Cadherin_2 Cadherin_3 Cadherin_C_2
Other DBs
NCBI-GeneID: 56098
NCBI-ProteinID: NP_061751
OMIM: 606305
HGNC: 8717
Ensembl: ENSG00000242419
UniProt: Q9Y5F7
Position
5:141485030..141512975
AA seq 938 aa
MLRKVRSWTEIWRWATLLFLFYHLGYVCGQIRYPVPEESQEGTFVGNVAQDFLLDTDSLS
ARRLQVAGEVNQRHFRVDLDSGALLIKNPIDREALCGLSASCIVPLEFVTEGPLEMYRAE
VEIVDVNDHAPRFPRQQLDLEIGEAAPPGQRFPLEKAQDADVGSNSISSYRLSSNEHFAL
DVKKRSDGSLVPELLLEKPLDREKQSDYRLVLTAVDGGNPPRSGTAELRVSVLDVNDNAP
AFQQSSYRISVLESAPAGMVLIQLNASDPDLGPSGNVTFYFSGHTPDRVRNLFSLHPTTG
KLTLLGPLDFESENYYEFDVRARDGGSPAMEQHCSLRVDLLDVNDNAPYITVTSELGTLP
ESAEPGTVVALISVQDPDSGSNGDVSLRIPDHLPFALKSAFRNQFSLVTAGPLDREAKSS
YDIMVTASDAGNPPLSTHRTIFLNISDVNDNPPSFFQRSHEVFVPENNRPGDLLCSLAAS
DPDSGLNALISYSLLEPRNRDVSASSFISLNPQTGAVHATRSFDYEQTQTLQFEVQARDR
GNPPLSSTVTVRLFVLDLNDNAPAVLRPRARPGSLCPQALPPSVGAGHLITKVTAVDLDS
GYNAWVSYQLLEAPDPSLFAVSRYAGEVRTAVPIPADLPPQKLVIVVKDSGSPPLSTSVT
LLVSLEEDTHPVVPDLRESSAPREGESRLTLYLAVSLVAICFVSFGSFVALLSKCLRGAA
CGVTCFPAGTCACLTRSRRREGLPPSNGILRIQLGSDDPIKFVDVGGHSHGCTPLASAPT
RSDSFMMVKSPSAPMAGEPVRPSCPPSDLLYGLEQAPPNTDWRFSQAQRPGTSGSQNGDD
TGTWPNNQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQN
VYIPGSNATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq 2817 nt   +upstreamnt  +downstreamnt
atgctccgcaaggtgagaagctggacagaaatctggcggtgggctacccttttgttcctc
ttttaccacctgggttacgtttgtgggcagatccgctacccggtcccagaggagtcacag
gaagggacttttgtagggaatgtcgctcaagatttcctgctggatacggacagtctgtca
gctcgcaggctgcaggtcgctggagaggtgaaccaaagacacttccgtgtggatttggac
agcggagccctgctcatcaagaacccaatcgaccgagaggcactgtgtgggctcagtgcc
agctgcatcgtgcccctggagtttgtcaccgaaggtcctttggaaatgtaccgagcagag
gtagagatcgtagatgtgaatgatcacgccccccgttttccgcggcagcagctggacttg
gaaattggggaggcagctcctccaggacagcgtttcccgttggaaaaggctcaggatgca
gatgtggggagcaattcgattagcagctataggctgagctccaatgaacactttgcactg
gatgtgaagaagcgcagcgacggcagcctggtcccagagctgctcctggagaagcctttg
gatcgagagaagcaatcggactaccgcctggtgctgactgctgtcgatggagggaacccg
ccgagatctggcaccgcagagctccgggtatccgtgctggacgtaaacgacaacgcccca
gccttccagcaatccagctacaggattagtgtgttggagagcgcaccagcgggcatggtg
ctcatccagctcaatgcctcagacccggacctgggtcccagtggtaacgtcaccttttat
ttcagtggtcatacccctgatcgtgtaagaaacctctttagcctgcaccccactactgga
aagcttactcttttggggcccctagactttgagagtgagaattactatgaatttgatgtg
cgggctcgcgatgggggttctccagccatggagcaacattgcagccttcgagtggatctg
ctggacgtaaatgacaatgccccttacatcacagtgacctcagagcttggaaccctcccc
gagagtgcagaacctggcactgtggtggcacttatcagtgtgcaggatccagactcaggg
tcaaacggagatgtgagcctccgcattcctgaccacttgccatttgccctcaagtctgcc
ttcaggaaccagttctccctggtgactgctggacccttggatcgagaggccaaatctagc
tatgacatcatggtcactgcttctgatgctgggaaccctcctctcagtacccacagaact
attttcctcaatatttcagatgtgaatgataatccaccctctttctttcagaggtcacat
gaggtgtttgttcctgagaacaatcgcccaggggacctgctttgctcccttgcagcctct
gacccagactctggcttgaatgcgcttatctcctactcactcctggagcccaggaatcga
gatgtatcagcttcctctttcatctctctgaacccccagacaggagctgttcatgctact
cgatcctttgactatgagcaaacccagacactgcagtttgaggtgcaggcccgggatcgg
ggcaacccaccccttagcagcactgtaacagttcgtctatttgtgctggacctcaatgac
aatgctccagctgtgctccgtcctcgggcccggcctggttccttatgtccccaagcactg
cctccatcagttggtgctggccacctaatcacaaaggtgactgctgtggacttggattca
ggttacaatgcttgggtttcctatcagctcctggaggccccagatcccagcctgtttgca
gtctctcgatatgctggggaggtgcggacggctgttcctatcccagctgacctcccacca
cagaagctggtcattgtggtaaaggatagtggtagtccaccactctctacctctgttact
ctcttagtgtccttagaggaagacactcatccagttgtcccagatcttcgagaatcttca
gctccaagggaaggagaatctcgtctaaccctctacttggctgtgtccctagtggcaatt
tgctttgtctcctttggctcattcgtggcactactctctaagtgtcttcgtggggcagcc
tgtggagtcacatgctttcctgctggcacctgtgcctgtctcaccagatctcgaaggagg
gaggggcttcccccttccaatgggatcctccgaatccagctagggtcagatgaccctatc
aagtttgttgatgtgggaggccactctcatggctgtacacccttggcttctgcacccact
cggagtgatagcttcatgatggtgaagtcacccagtgcacctatggcaggggagcctgtt
cgcccaagctgcccaccctctgatcttctctatgggctagagcaagccccgcccaacacg
gactggcgtttctctcaggcccagagacccggcaccagcggctcccaaaatggcgatgac
accggcacctggcccaacaaccagtttgacacagagatgctgcaagccatgatcttggcg
tccgccagtgaagctgctgatgggagctccaccctgggagggggtgccggcaccatggga
ttgagcgcccgctacggaccccagttcaccctgcagcacgtgcccgactaccgccagaat
gtctacatcccaggcagcaatgccacactgaccaacgcagctggcaagcgggatggcaag
gccccagcaggtggcaatggcaacaagaagaagtcgggcaagaaggagaagaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (10)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (17)   
   RefSeq(nuc) (3)   
   GenBank (7)   
   EMBL (7)   
Protein domain (5)   
   Pfam (5)   
All databases (49)   

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