KEGG   Homo sapiens (human): 56109
Entry
56109             CDS       T01001                                 
Symbol
PCDHGA6, PCDH-GAMMA-A6
Name
(RefSeq) protocadherin gamma subfamily A, 6
  KO
K16495  protocadherin gamma subfamily A
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04515 Cell adhesion molecules [BR:hsa04515]
    56109 (PCDHGA6)
Cell adhesion molecules [BR:hsa04515]
 Cadherins
  Protocadherins
   56109 (PCDHGA6)
SSDB
Motif
Pfam: Cadherin Cadherin_2 Cadherin_C_2 Cadherin_tail RET_CLD1
Other DBs
NCBI-GeneID: 56109
NCBI-ProteinID: NP_061742
OMIM: 606293
HGNC: 8704
Ensembl: ENSG00000253731
UniProt: Q9Y5G7
Position
5:141373891..141512975
AA seq 932 aa
MAPPQRHPQRSEQVLLLTLLGTLWGAAAAQIRYSIPEELEKGSFVGNIVKDLGLEPQELA
EHGVRIVSRGRMQLFSLNPRNGSLVTAGRIDREELCAQSPRCLVSFNILVEDKLNLYPVE
VEIVDINDNTPRFLKEELEVKILENAAPSSRFPLMEVYDPDVGMNSLQGFKLSGNSHFSV
DVQSEAHGPKYPELVLEGTLDREGEAVYRLVLTAMDGGDPVRSSVAQILVTVLDVNDNTP
MFTQPVYRVSVPENLPVGTPVLAVTATDQDEGVHGEVTYSFVKITEKISQIFCLNVLTGE
ISTSANLDYEDSSFYELGVEARDGPGLRDRAKVLITILDVNDNVPEVVVTSGSRTIAESA
PPGTVIALFQVFDRDSGLNGLVTCSIPRSLPFELEKSVGNYYRLVTNAALDREEVFLYNI
TVTATDKGTPPLSTETIISLNVADTNDNPPTFPHSSYSVYVLENNPRGASIFSVNALDPD
VDQNAQVSYSLAEDTLQGAPLSSYVSINSDTGILYALRSFDYEQLRDLQLWVTASDSGDP
PLSSNVSLSLFVLDQNDNAPEILYPALPTDGSTGVELAPRSAEPGYLVTKVVAVDRDSGQ
NAWLSYRLLKASEPGLFSVGLHTGEVRTARALLDRDALKQSLVVAVQDHGQPPLSATVTL
TVAVADRIPDILADLGSLEPSAKPNDSDLTLYLVVAVAAVSCVFLAFVIVLLALRLQRWH
KSRLLQASGGGLASMPGSHFVGVEGVRAFLQTYSHEVSLTADSRKSHLIFPQPNYADTLI
NQESYEKSEPLLITQDLLETKGEPRQLQQAPPNTDWRFSQAQRPGTSGSQNGDDTGTWPN
NQFDTEMLQAMILASASEAADGSSTLGGGAGTMGLSARYGPQFTLQHVPDYRQNVYIPGS
NATLTNAAGKRDGKAPAGGNGNKKKSGKKEKK
NT seq 2799 nt   +upstreamnt  +downstreamnt
atggcgcctccgcagaggcatccgcagcgcagcgagcaggtcctgctcctcacgctcctg
gggacgctgtggggggccgcggcagcgcagatccgctactctattcccgaggagctggag
aaaggctccttcgtaggcaacatcgtcaaggatctgggactggagccccaggagttggcg
gagcacggagtccgcatcgtctccagaggtaggatgcagcttttctctctgaatccgcga
aacggcagcttggtcaccgcgggtaggatagaccgcgaggagctctgtgctcagagcccg
cggtgtctggtgagttttaacatccttgtcgaggataaactgaatctttatcccgtggaa
gtggaaatagtggacattaatgacaatacaccccgattcttaaaggaagaattggaagtg
aaaattctcgaaaacgcagctccatcctctcgttttccactaatggaggtctatgaccct
gatgtgggaatgaactcccttcagggatttaagctcagtggtaatagtcacttctcagtg
gacgtgcaaagcgaagcccatgggcccaagtacccggagctggtgctggagggcacactg
gaccgggaaggagaagccgtttaccgcctggtccttactgccatggatggcggcgaccct
gtccgctcaagcgtcgcccaaattctggtaacagttctagatgtgaatgacaacactcca
atgtttactcagcctgtctaccgtgtaagtgttcctgaaaacctgccagtaggcacacca
gtgttggcagtgactgccaccgaccaggatgaaggagtccacggggaagtaacttattcc
tttgtgaagattacagaaaagatctcacaaattttctgtttgaatgttttgactggagaa
atttcaacttctgcaaatctagactatgaggactcgagtttttatgagctgggtgttgaa
gcccgggatgggccaggtcttcgagacagagcgaaagtcttaataactatcttggatgtc
aatgataatgtaccagaagtggttgttacatctggaagcagaacaattgctgaaagtgca
cctccaggaacagtaatcgccctttttcaagtgttcgatcgagactctggcctgaatggc
ctggtaacctgttccatcccgagaagtctcccatttgaattggaaaaatcagttggcaat
tattatcgattagtgacaaatgcagctctagaccgggaagaggtattcttgtacaacatc
actgtgacagccacggacaaaggaacaccacctctgtctacagaaacaatcatctctcta
aatgtggcagacaccaacgacaacccgcccaccttcccccattcatcctactcagtctat
gtccttgaaaacaaccccaggggtgcctccatcttctctgtgaatgcactggaccctgac
gtggaccagaacgcccaagtctcctactcactggcagaagacaccctccagggggcgccc
ctgtcctcctacgtgtccatcaactccgacactgggattctgtacgccctgcgctccttc
gactatgagcagttgagagacctacagctgtgggtgacagccagcgacagcggggacccg
cctcttagcagcaacgtgtcactgagcctgtttgtgctggaccagaatgacaatgcgccc
gagatcctgtaccccgccctccccacagacggttccactggcgtggagctggcgccccgc
tccgcagagcccggctacctggtgaccaaggtggtggcggtggacagagactcgggccag
aacgcctggctgtcctaccgcctgctcaaggccagcgagccaggacttttctcagtgggc
ctgcacacgggcgaggtgcgcacggcgcgcgccctgctggacagagacgcgctcaagcag
agcctagtggtggccgtccaggaccacggccagccccctctctccgccactgtcacgctc
accgtggccgtggccgacaggatccccgacatcctggccgacctgggcagcctcgagccc
tccgccaaacccaacgattcggacctcactctgtacctggtggtggcggtggccgcggtc
tcctgcgtcttcctggccttcgtcatcgtgctgctggcgctcagactgcagcgctggcac
aagtcacgcctgctgcaggcttcgggaggtggcttagcgagcatgcccggctcgcacttt
gtgggcgtggaaggggttcgggctttcctgcagacctattcccacgaggtctcactcact
gcagactcgcgtaagagtcatctgattttcccccagcccaactatgccgacacgcttatc
aaccaggagagctatgagaaaagcgagcctcttctgataactcaggatttacttgaaacg
aaaggagaacccaggcaacttcagcaagccccgcccaacacggactggcgtttctctcag
gcccagagacccggcaccagcggctcccaaaatggcgatgacaccggcacctggcccaac
aaccagtttgacacagagatgctgcaagccatgatcttggcgtccgccagtgaagctgct
gatgggagctccaccctgggagggggtgccggcaccatgggattgagcgcccgctacgga
ccccagttcaccctgcagcacgtgcccgactaccgccagaatgtctacatcccaggcagc
aatgccacactgaccaacgcagctggcaagcgggatggcaaggccccagcaggtggcaat
ggcaacaagaagaagtcgggcaagaaggagaagaagtaa

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Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (4)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
Protein domain (5)   
   Pfam (5)   
All databases (44)   

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