KEGG   Homo sapiens (human): 57020
Entry
57020             CDS       T01001                                 
Symbol
VPS35L, C16orf62, EC97, RTSC3
Name
(RefSeq) VPS35 endosomal protein sorting factor like
  KO
K25731  VPS35 endosomal protein-sorting factor-like
Organism
hsa  Homo sapiens (human)
Disease
H01568  3C syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    57020 (VPS35L)
Membrane trafficking [BR:hsa04131]
 Protein recycling
  Others
   Retriever complex
    57020 (VPS35L)
SSDB
Motif
Pfam: DUF1477
Other DBs
NCBI-GeneID: 57020
NCBI-ProteinID: NP_064710
OMIM: 618981
HGNC: 24641
Ensembl: ENSG00000103544
UniProt: Q7Z3J2 E7EWW0
Structure
Position
16:19555703..19701163
AA seq 963 aa
MAVFPWHSRNRNYKAEFASCRLEAVPLEFGDYHPLKPITVTESKTKKVNRKGSTSSTSSS
SSSSVVDPLSSVLDGTDPLSMFAATADPAALAAAMDSSRRKRDRDDNSVVGSDFEPWTNK
RGEILARYTTTEKLSINLFMGSEKGKAGTATLAMSEKVRTRLEELDDFEEGSQKELLNLT
QQDYVNRIEELNQSLKDAWASDQKVKALKIVIQCSKLLSDTSVIQFYPSKFVLITDILDT
FGKLVYERIFSMCVDSRSVLPDHFSPENANDTAKETCLNWFFKIASIRELIPRFYVEASI
LKCNKFLSKTGISECLPRLTCMIRGIGDPLVSVYARAYLCRVGMEVAPHLKETLNKNFFD
FLLTFKQIHGDTVQNQLVVQGVELPSYLPLYPPAMDWIFQCISYHAPEALLTEMMERCKK
LGNNALLLNSVMSAFRAEFIATRSMDFIGMIKECDESGFPKHLLFRSLGLNLALADPPES
DRLQILNEAWKVITKLKNPQDYINCAEVWVEYTCKHFTKREVNTVLADVIKHMTPDRAFE
DSYPQLQLIIKKVIAHFHDFSVLFSVEKFLPFLDMFQKESVRVEVCKCIMDAFIKHQQEP
TKDPVILNALLHVCKTMHDSVNALTLEDEKRMLSYLINGFIKMVSFGRDFEQQLSFYVES
RSMFCNLEPVLVQLIHSVNRLAMETRKVMKGNHSRKTAAFVRACVAYCFITIPSLAGIFT
RLNLYLHSGQVALANQCLSQADAFFKAAISLVPEVPKMINIDGKMRPSESFLLEFLCNFF
STLLIVPDHPEHGVLFLVRELLNVIQDYTWEDNSDEKIRIYTCVLHLLSAMSQETYLYHI
DKVDSNDSLYGGDSKFLAENNKLCETVMAQILEHLKTLAKDEALKRQSSLGLSFFNSILA
HGDLRNNKLNQLSVNLWHLAQRHGCADTRTMVKTLEYIKKQSKQPDMTHLTELALRLPLQ
TRT
NT seq 2892 nt   +upstreamnt  +downstreamnt
atggccgtctttccttggcactccaggaataggaactacaaagctgaatttgcatcatgc
cgactggaggctgtaccattggagtttggggactatcaccctctgaaacccataactgtc
acagagtcaaagacaaagaaagtgaaccggaaaggaagcacttcttccacgtcctcctcc
tcctccagctccgtggtggacccgctgagcagcgtcctcgatgggactgaccccctctcc
atgtttgcagccactgctgaccccgcagccttggcagctgccatggacagctccagaagg
aaacgtgatagagatgataactccgttgtaggatcggattttgagccttggaccaacaaa
cggggagaaatccttgcccggtacaccactaccgaaaagctgtctattaatctgtttatg
ggatctgaaaaaggcaaagctgggactgccacattggcaatgtcagagaaggtgcggacc
cggctggaggagctggatgactttgaggagggttcccaaaaggagctgttgaacttgact
cagcaggattacgtgaaccgcatagaggagctcaaccaatcgctgaaggatgcctgggcc
tcagaccagaaagtgaaggctctaaaaatagtcatccagtgttcaaagcttctttcagac
accagtgttattcagttctacccaagcaaatttgtccttatcaccgacatacttgataca
tttggaaagctcgtgtacgagcgcatcttttccatgtgtgtggatagccgcagcgtctta
ccagatcacttttctccagagaatgcaaatgacacggccaaggaaacatgcctaaattgg
tttttcaagattgcctccatcagggaactcattccaagattttacgtggaggcatccatc
ctgaaatgtaacaaattcctctccaaaacgggaatttcagagtgcctgccccggttgaca
tgcatgatcagagggatcggagacccactagtgtcggtgtatgcccgtgcctacctgtgc
cgggtgggaatggaagtggccccacatctcaaagaaaccctaaataagaacttttttgac
ttcctccttacgttcaaacagattcatggggatacggtccagaaccagctggtggtccaa
ggagtggagctcccatcttacctccccttgtacccgcctgccatggactggatcttccag
tgcatctcctaccatgcccccgaggctctgctgaccgagatgatggaaaggtgtaagaaa
ctaggaaacaatgccttgctgttgaattctgtgatgtctgccttccgggctgagttcatc
gccacaaggtctatggatttcattggcatgattaaagagtgtgatgaatctggtttcccc
aagcatcttctttttcgatcactgggattaaacttggccttggctgatcctcctgagagt
gaccgacttcagattctcaacgaagcttggaaagtcatcactaagctgaagaacccacag
gactacattaattgtgccgaagtgtgggtggaatacacctgcaagcatttcacgaaacga
gaggtgaataccgttttggcagatgtcatcaagcacatgactccagatcgtgcatttgaa
gattcctacccccagcttcagttaataattaagaaagttattgcccacttccatgacttc
tcagttcttttctcagtggaaaaatttctgccgtttctggacatgttccaaaaagagagt
gtgcgggtggaggtttgcaaatgcatcatggacgcctttatcaagcatcaacaagagccc
accaaggacccggtcatcttgaatgcccttttgcatgtttgcaagaccatgcatgactct
gtgaatgcactcactcttgaggatgagaaaagaatgctgtcatatttgattaatggattt
ataaaaatggtttcctttggccgtgattttgaacaacagctgagtttttatgttgagtcc
aggtcgatgttttgcaatctggagcctgttcttgtgcagttgattcatagtgtgaaccgg
ttggcaatggagacaagaaaagtaatgaaaggaaatcattccagaaagacagctgcattt
gtccgggcctgtgttgcctactgcttcatcaccatcccctccctggcgggcatcttcaca
cgtctcaatctctacctgcattctggtcaggtggccttggccaaccagtgcctctcccaa
gctgatgcttttttcaaagccgctataagccttgttccggaagttccaaagatgattaat
attgatgggaagatgcggccatcggaatcgttccttctggaattcctctgcaatttcttt
tctactttattaatagttccggatcatcctgaacatggggtcctgtttcttgttcgagag
cttctcaacgtgatccaggactacacctgggaggacaacagcgatgagaaaatccgcatc
tacacctgcgtcctgcatctcctctccgccatgagccaggagacgtacctttaccacata
gacaaagtggactccaacgacagcctctacgggggagactccaagttcctggcagaaaac
aacaagctgtgtgagacggtgatggctcagatcctagagcatctgaaaaccctggccaag
gacgaggccctgaagcgccagagctcgttgggcctttccttctttaacagcatcttggcc
catggggacctacgcaacaacaagctcaaccagctctccgtcaacctgtggcacctggca
cagaggcacggctgtgcagacaccaggaccatggtgaaaacgctagaatacatcaagaag
caaagcaaacaaccagacatgactcatctgacggagctggccctcagactccctctgcaa
acaaggacctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (3)   
   OC (1)   
Protein sequence (8)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (37)   
   RefSeq(nuc) (7)   
   GenBank (15)   
   EMBL (15)   
3D Structure (3)   
   PDB (3)   
Protein domain (1)   
   Pfam (1)   
All databases (82)   

Download RDF
DBGET integrated database retrieval system