KEGG   Homo sapiens (human): 6827
Entry
6827              CDS       T01001                                 
Symbol
SUPT4H1, SPT4, SPT4H, SUPT4H, Supt4a
Name
(RefSeq) SPT4 homolog, DSIF elongation factor subunit
  KO
K15171  transcription elongation factor SPT4
Organism
hsa  Homo sapiens (human)
Pathway
hsa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    6827 (SUPT4H1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    6827 (SUPT4H1)
   03019 Messenger RNA biogenesis [BR:hsa03019]
    6827 (SUPT4H1)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription elongation factors
     6827 (SUPT4H1)
  RNA polymerase I system
     6827 (SUPT4H1)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    DRB sensitivity inducing factor (DSIF) complex
     6827 (SUPT4H1)
SSDB
Motif
Pfam: Spt4
Other DBs
NCBI-GeneID: 6827
NCBI-ProteinID: NP_003159
OMIM: 603555
HGNC: 11467
Ensembl: ENSG00000213246
UniProt: P63272
Structure
Position
17:complement(58345178..58352201)
AA seq 117 aa
MALETVPKDLRHLRACLLCSLVKTIDQFEYDGCDNCDAYLQMKGNREMVYDCTSSSFDGI
IAMMSPEDSWVSKWQRVSNFKPGVYAVSVTGRLPQGIVRELKSRGVAYKSRDTAIKT
NT seq 354 nt   +upstreamnt  +downstreamnt
atggccctggagacggtgccgaaggacctgcggcatctgcgggcctgtttgctgtgttcg
ctggtcaagactatagaccagtttgaatatgatggttgtgacaattgtgatgcatatcta
caaatgaagggtaaccgagagatggtatatgactgcactagctcttcctttgatggaatc
attgcgatgatgagtccagaggacagctgggtctccaagtggcagcgagtcagtaacttt
aagccaggtgtatatgcggtgtcagtcactggtcgcctgccccaaggaatcgtgcgggag
ctgaaaagtcgaggagtggcctacaaatccagagacacagctataaagacctag

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (11)   
   KEGG ORTHOLOGY (1)   
   RefGene (1)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (32)   
   RefSeq(nuc) (2)   
   GenBank (15)   
   EMBL (15)   
3D Structure (11)   
   PDB (11)   
Protein domain (1)   
   Pfam (1)   
All databases (64)   

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