KEGG   Homo sapiens (human): 79009
Entry
79009             CDS       T01001                                 
Symbol
DDX50, GU2, GUB, RH-II/GuB, mcdrh
Name
(RefSeq) DExD-box helicase 50
  KO
K13183  ATP-dependent RNA helicase DDX50 [EC:5.6.2.7]
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    79009 (DDX50)
Enzymes [BR:hsa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     79009 (DDX50)
Spliceosome [BR:hsa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   RNA helicase-like proteins
    79009 (DDX50)
SSDB
Motif
Pfam: DEAD Helicase_C GUCT ResIII CMS1 ERCC3_RAD25_C AAA_30
Other DBs
NCBI-GeneID: 79009
NCBI-ProteinID: NP_076950
OMIM: 610373
HGNC: 17906
Ensembl: ENSG00000107625
UniProt: Q9BQ39
Structure
Position
10:68901315..68946847
AA seq 737 aa
MPGKLLWGDIMELEAPLEESESQKKERQKSDRRKSRHHYDSDEKSETRENGVTDDLDAPK
AKKSKMKEKLNGDTEEGFNRLSDEFSKSHKSRRKDLPNGDIDEYEKKSKRVSSLDTSTHK
SSDNKLEETLTREQKEGAFSNFPISEETIKLLKGRGVTYLFPIQVKTFGPVYEGKDLIAQ
ARTGTGKTFSFAIPLIERLQRNQETIKKSRSPKVLVLAPTRELANQVAKDFKDITRKLSV
ACFYGGTSYQSQINHIRNGIDILVGTPGRIKDHLQSGRLDLSKLRHVVLDEVDQMLDLGF
AEQVEDIIHESYKTDSEDNPQTLLFSATCPQWVYKVAKKYMKSRYEQVDLVGKMTQKAAT
TVEHLAIQCHWSQRPAVIGDVLQVYSGSEGRAIIFCETKKNVTEMAMNPHIKQNAQCLHG
DIAQSQREITLKGFREGSFKVLVATNVAARGLDIPEVDLVIQSSPPQDVESYIHRSGRTG
RAGRTGICICFYQPRERGQLRYVEQKAGITFKRVGVPSTMDLVKSKSMDAIRSLASVSYA
AVDFFRPSAQRLIEEKGAVDALAAALAHISGASSFEPRSLITSDKGFVTMTLESLEEIQD
VSCAWKELNRKLSSNAVSQITRMCLLKGNMGVCFDVPTTESERLQAEWHDSDWILSVPAK
LPEIEEYYDGNTSSNSRQRSGWSSGRSGRSGRSGGRSGGRSGRQSRQGSRSGSRQDGRRR
SGNRNRSRSGGHKRSFD
NT seq 2214 nt   +upstreamnt  +downstreamnt
atgcctgggaaactcctctggggggacattatggagctggaagcacccttggaggagtcc
gagagccagaagaaggagaggcaaaagagtgacagaaggaagtcaaggcaccattatgac
tcggatgagaaatcagaaacaagagaaaatggtgttacagatgacctggatgctcccaag
gccaaaaaatctaaaatgaaagagaagctaaatggagacactgaagaaggatttaataga
ctttcagatgaattctccaaatctcataagtcaagaagaaaagatctaccaaatggagat
atagatgaatatgaaaaaaaatcaaagcgagtatcatctttagatacttctactcataaa
tcaagtgataataaactagaggagaccttaacacgtgaacagaaagaaggagccttctcc
aattttcctatttctgaagagactataaagcttctgaaaggtcgaggggtaacatatctc
tttcctattcaagttaagacctttggtcctgtatatgaaggaaaagatttaatagctcaa
gcacggacaggaacaggaaagacattctcttttgccatccccttaattgaaagactccaa
agaaatcaagaaacaattaaaaaaagccgctcaccaaaggtacttgttttggctccaaca
agggaactggcaaaccaagtagccaaagacttcaaagatataactaggaaactcagcgtg
gcgtgtttttatggtggaacatcatatcaaagccaaattaatcatattcgaaatggtatt
gacatcttggttggaacacctggtcgtatcaaagaccatctgcagagtggccgattggat
ctttctaaactgcgacatgttgtgcttgatgaagtggatcagatgttagatttaggtttc
gctgaacaagttgaagatattattcatgaatcctacaaaactgattctgaagacaatcct
cagactttacttttttctgcaacttgcccacagtgggtatacaaagttgcaaaaaaatac
atgaaatccagatatgaacaggttgaccttgttggaaaaatgactcaaaaggctgcaact
actgtggaacatttggccatccagtgtcattggtctcagaggccagcagttattggagat
gtccttcaagtctacagtgggtctgaagggagggctattattttctgtgagaccaagaag
aatgtaactgaaatggccatgaatccacacataaaacagaatgcccagtgtttacatggg
gacattgcacagtcacaaagagaaattacactaaaaggcttcagagaaggtagttttaaa
gttttggtggcaaccaatgtggctgcccgtggtttggacattcctgaagttgacctggtg
attcaaagttctcctcctcaggatgttgagtcctatatccatcgctctggacgcacaggt
agagctggacggacagggatttgtatatgtttttatcaaccaagagaaagaggtcaacta
agatatgtggaacaaaaagcaggaattacttttaaacgtgtaggtgttccttctacaatg
gatttagttaaatctaaaagcatggatgccatcaggtctctggcttccgtttcttacgct
gctgttgattttttccgaccatcagctcagagactgatagaagagaaaggtgcagtggat
gcattggctgcagctttagcccacatttctggtgcatcaagctttgaaccacgatctttg
atcacctctgataaggggtttgtgaccatgactctggaaagcctagaggaaatacaggat
gtcagctgtgcttggaaagaacttaacagaaagctgagtagtaatgcagtgtctcagatt
accagaatgtgcctcctgaaaggaaatatgggtgtttgctttgatgttcctacaactgag
tcagaaaggttacaggcagagtggcatgattccgactggatactctcagtgccagccaaa
ttacctgaaattgaagaatattatgatggaaacacatcttctaattccagacagaggagt
ggctggtcaagtggtcgatcaggccggtcaggccggtcaggtggtcgatctggcggccgg
tcaggtagacagagtcgacaaggaagtcgctcaggaagtcgacaagatggtagaagacga
agtgggaatagaaatcgatcaagaagtgggggccacaaacggagttttgactga

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Ontology (3)   
   KEGG BRITE (3)   
Disease (1)   
   OMIM (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (19)   
   KEGG ORTHOLOGY (1)   
   RefGene (2)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (11)   
   OC (1)   
Protein sequence (12)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (10)   
DNA sequence (30)   
   RefSeq(nuc) (10)   
   GenBank (10)   
   EMBL (10)   
3D Structure (1)   
   PDB (1)   
Protein domain (7)   
   Pfam (7)   
All databases (75)   

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