KEGG   Homo sapiens (human): 79631
Entry
79631             CDS       T01001                                 
Symbol
EFL1, EFTUD1, FAM42A, HsT19294, RIA1, SDS2
Name
(RefSeq) elongation factor like GTPase 1
  KO
K14536  ribosome assembly protein 1 [EC:3.6.5.-]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03008  Ribosome biogenesis in eukaryotes
Disease
H00439  Shwachman-Diamond syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03008 Ribosome biogenesis in eukaryotes
    79631 (EFL1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hsa03009]
    79631 (EFL1)
Ribosome biogenesis [BR:hsa03009]
 Eukaryotic type
  Pre-60S particles
   GTPases
    79631 (EFL1)
SSDB
Motif
Pfam: GTP_EFTU EFG_C EFG_III EFG_IV GTP_EFTU_D2 MMR_HSR1
Other DBs
NCBI-GeneID: 79631
NCBI-ProteinID: NP_001309774
OMIM: 617538
HGNC: 25789
Ensembl: ENSG00000140598
UniProt: Q7Z2Z2
Structure
Position
15:complement(82130233..82262734)
AA seq 1120 aa
MVLNSLDKMIQLQKNTANIRNICVLAHVDHGKTTLADCLISSNGIISSRLAGKLRYMDSR
EDEQIRGITMKSSAISLHYATGNEEYLINLIDSPGHVDFSSEVSTAVRICDGCIIVVDAV
EGVCPQTQAVLRQAWLENIRPVLVINKIDRLIVELKFTPQEAYSHLKNILEQINALTGTL
FTSKVLEERAERETESQVNPNSEQGEQVYDWSTGLEDTDDSHLYFSPEQGNVVFTSAIDG
WGFGIEHFARIYSQKIGIKKEVLMKTLWGDYYINMKAKKIMKGDQAKGKKPLFVQLILEN
IWSLYDAVLKKDKDKIDKIVTSLGLKIGAREARHSDPKVQINAICSQWLPISHAVLAMVC
QKLPSPLDITAERVERLMCTGSQTFDSFPPETQALKAAFMKCGSEDTAPVIIFVSKMFAV
DAKALPQNKPRPLTQEEIAQRRERARQRHAEKLAAAQGQAPLEPTQDGSAIETCPKGEEP
RGDEQQVESMTPKPVLQEENNQESFIAFARVFSGVARRGKKIFVLGPKYSPLEFLRRVPL
GFSAPPDGLPQVPHMAYCALENLYLLMGRELEYLEEVPPGNVLGIGGLQDFVLKSATLCS
LPSCPPFIPLNFEATPIVRVAVEPKHPSEMPQLVKGMKLLNQADPCVQILIQETGEHVLV
TAGEVHLQRCLDDLKERFAKIHISVSEPIIPFRETITKPPKVDMVNEEIGKQQKVAVIHQ
MKEDQSKIPEGIQVDSDGLITITTPNKLATLSVRAMPLPEEVTQILEENSDLIRSMEQLT
SSLNEGENTHMIHQKTQEKIWEFKGKLEQHLTGRRWRNIVDQIWSFGPRKCGPNILVNKS
EDFQNSVWTGPADKASKEASRYRDLGNSIVSGFQLATLSGPMCEEPLMGVCFVLEKWDLS
KFEEQGASDLAKEGQEENETCSGGNENQELQDGCSEAFEKRTSQKGESPLTDCYGPFSGQ
LIATMKEACRYALQVKPQRLMAAMYTCDIMATGDVLGRVYAVLSKREGRVLQEEMKEGTD
MFIIKAVLPVAESFGFADEIRKRTSGLASPQLVFSHWEIIPSDPFWVPTTEEEYLHFGEK
ADSENQARKYMNAVRKRKGLYVEEKIVEHAEKQRTLSKNK
NT seq 3363 nt   +upstreamnt  +downstreamnt
atggtgctcaacagtttggataagatgattcaactccagaaaaacactgccaacatcagg
aatatttgtgttttggctcatgttgaccatggaaaaactactctggctgactgtcttata
tctagcaatggaatcatctccagccgcctagcaggcaagttaaggtacatggacagcaga
gaagatgaacagatccgagggatcactatgaaatccagtgccatttccctacattatgca
acaggtaatgaggagtacctgatcaatctgatagactctccaggacacgtggacttttcc
tcagaagtatcaaccgctgttcgcatttgtgatggatgcatcattgtggtagatgctgtg
gaaggagtctgtccacagacacaggcagttctgcgacaagcttggcttgaaaacatccgt
ccggttttagtgattaataagattgatcgcttgatagtggaactgaaattcaccccacaa
gaggcctattctcacctcaagaatattttagaacagattaatgcgctcacagggactctt
tttacttctaaagtcctagaagaaagagcagagagggagactgaatcccaagtgaatcca
aattctgaacaaggagagcaagtatatgactggagcactggcttggaggacacagatgat
tctcacctttacttctctccagaacagggaaatgtggtgtttaccagtgcaatagatggg
tggggctttggaattgagcacttcgccagaatctacagtcaaaaaattggcatcaaaaag
gaagttcttatgaaaaccttgtggggagattactatataaatatgaaggctaaaaagatc
atgaagggtgatcaggccaaaggaaagaaacctttatttgtacagttgatcctggaaaat
atatggagtttgtatgatgctgttttgaaaaaggacaaagacaaaattgataaaatagtg
acttctttaggattaaaaattggagcccgggaggcacgacattcagaccctaaagttcag
atcaacgccatttgcagtcagtggctacccatatcccatgctgttcttgctatggtgtgt
cagaaacttcctagtccccttgatattacagctgagagagtggagagactgatgtgcaca
ggatcacaaacttttgactcttttccaccagaaactcaagcactgaaagcagcttttatg
aaatgtggaagtgaggacactgctccagttattatatttgtttccaaaatgtttgcagtt
gatgctaaggccttgcctcagaataagccaaggcctctcactcaagaagaaattgctcag
agacgtgagcgtgcaagacaaaggcatgcagagaagcttgcagcagcacagggacaggca
cccttggagcccacccaagatgggagtgccattgaaacatgtccaaaaggagaggagcca
agaggtgacgagcaacaggtggaaagtatgacccctaaacctgtgctccaggaagaaaac
aaccaagagtcttttattgcatttgctcgggtgttcagtggtgtggctcgaagaggaaag
aaaatttttgtcttggggcccaaatacagtcctcttgagtttttacgaagggtaccatta
ggcttctcagctccaccagatggcctcccccaagtcccccacatggcatactgtgctctg
gaaaacctgtatcttctgatgggaagggaactggaatatctagaggaggtacctccagga
aatgtgctaggaataggaggccttcaagattttgtgctgaaatctgcaacactgtgtagc
ctgccatcctgcccaccatttataccactcaacttcgaagccactcctattgtgagagtt
gctgttgaaccaaaacatccaagtgaaatgcctcagctcgtaaaaggaatgaaactgtta
aaccaggctgatccctgtgtccagattttaattcaggaaacgggagagcacgttttagtc
acagcaggagaagtccaccttcagcgatgcctggatgacttaaaagaaaggtttgcaaag
attcatatcagtgtatctgaacctattattccattcagagaaacaatcacaaaaccccca
aaagttgacatggtcaatgaagaaataggcaaacagcaaaaagttgcagtcatacaccaa
atgaaagaagatcaaagcaaaatccctgaaggaatccaagttgactctgacgggctaatc
accataacaactcccaataaacttgccacgctcagtgttcgagccatgccccttccagaa
gaagtcacccagattctggaagaaaatagtgatttgattcgttctatggagcagttgaca
tcctctttgaatgagggtgaaaatactcacatgattcatcagaagacccaagagaaaatt
tgggaattcaaaggaaaactggagcaacacctaacagggagaagatggaggaacattgtt
gaccaaatctggtcatttggcccaagaaaatgtgggcccaacatactagtcaataaaagt
gaagattttcagaactcagtatggacaggtccagctgacaaagcttcaaaagaagccagt
agataccgagatttgggcaatagcattgtgagtggcttccaactagcaaccctctctggc
cccatgtgtgaggagcctctcatgggtgtctgttttgttctggaaaaatgggacctaagt
aaatttgaggaacaaggagcaagtgatctggcaaaagagggacaggaggaaaatgaaacc
tgttctggtggaaatgaaaaccaagagctacaagatggctgctctgaggcctttgagaag
aggacatcacagaaaggagaatctccactcactgactgctatggacctttctcaggacag
ctaattgccaccatgaaagaagcatgtcgctatgcactgcaagtgaaacctcagcgcctg
atggcagctatgtacacatgtgacatcatggccactggtgatgttctcggtcgagtctat
gctgtcttgtcaaagagagaaggtcgggtacttcaagaagaaatgaaagaagggacagac
atgttcatcatcaaggctgtgctgcctgttgctgaaagctttggttttgctgatgaaatc
aggaagaggacaagtggcctggccagcccacaactagtattcagccattgggagatcatt
cccagtgaccccttctgggtgccaactactgaggaggaatacttgcactttggggagaag
gctgactctgagaaccaagcccggaagtacatgaacgcagtacgaaagcggaaggggctt
tatgtggaagaaaagattgtggagcatgcagaaaagcagaggacactcagcaaaaataag
tag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (6)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (8)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (6)   
DNA sequence (23)   
   RefSeq(nuc) (7)   
   GenBank (8)   
   EMBL (8)   
3D Structure (2)   
   PDB (2)   
Protein domain (6)   
   Pfam (6)   
All databases (62)   

Download RDF
DBGET integrated database retrieval system