KEGG   Homo sapiens (human): 85360
Entry
85360             CDS       T01001                                 
Symbol
SYDE1, 7h3, SYD1
Name
(RefSeq) synapse defective Rho GTPase homolog 1
  KO
K20655  Rho GTPase-activating protein SYDE
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    85360 (SYDE1)
Membrane trafficking [BR:hsa04131]
 Others
  Rho GTPase associated proteins
   Rho GTPase-activating proteins
    85360 (SYDE1)
SSDB
Motif
Pfam: RhoGAP
Other DBs
NCBI-GeneID: 85360
NCBI-ProteinID: NP_149014
OMIM: 617377
HGNC: 25824
Ensembl: ENSG00000105137
UniProt: Q6ZW31
Position
19:15107401..15114974
AA seq 735 aa
MAEPLLRKTFSRLRGREKLPRKKSDAKERGHPAQRPEPSPPEPEPQAPEGSQAGAEGPSS
PEASRSPARGAYLQSLEPSSRRWVLGGAKPAEDTSLGPGVPGTGEPAGEIWYNPIPEEDP
RPPAPEPPGPQPGSAESEGLAPQGAAPASPPTKASRTKSPGPARRLSIKMKKLPELRRRL
SLRGPRAGRERERAAPAGSVISRYHLDSSVGGPGPAAGPGGTRSPRAGYLSDGDSPERPA
GPPSPTSFRPYEVGPAARAPPAALWGRLSLHLYGLGGLRPAPGATPRDLCCLLQVDGEAR
ARTGPLRGGPDFLRLDHTFHLELEAARLLRALVLAWDPGVRRHRPCAQGTVLLPTVFRGC
QAQQLAVRLEPQGLLYAKLTLSEQQEAPATAEPRVFGLPLPLLVERERPPGQVPLIIQKC
VGQIERRGLRVVGLYRLCGSAAVKKELRDAFERDSAAVCLSEDLYPDINVITGILKDYLR
ELPTPLITQPLYKVVLEAMARDPPNRVPPTTEGTRGLLSCLPDVERATLTLLLDHLRLVS
SFHAYNRMTPQNLAVCFGPVLLPARQAPTRPRARSSGPGLASAVDFKHHIEVLHYLLQSW
PDPRLPRQSPDVAPYLRPKRQPPLHLPLADPEVVTRPRGRGGPESPPSNRYAGDWSVCGR
DFLPCGRDFLSGPDYDHVTGSDSEDEDEEVGEPRVTGDFEDDFDAPFNPHLNLKDFDALI
LDLERELSKQINVCL
NT seq 2208 nt   +upstreamnt  +downstreamnt
atggccgagccgctactcaggaaaaccttctcccgcctgcggggccgggagaaacttccc
cggaaaaagtcggacgccaaggagcgcggccacccagcccagcgcccagagcccagccct
ccagagccagagccccaggctcccgaagggtcccaggccggagcagaggggccctccagc
cccgaggcatcaaggagccctgcacggggagcctacctgcaaagcctggagcccagtagc
cgccgatgggtgctgggtggggccaagccagctgaggacacctctttagggcctggggta
cctggcactggggagcccgccggcgagatctggtacaaccccatccctgaggaagacccc
agacctccagcacctgagcccccggggccacagcctggctcagctgagtcagagggcctg
gccccccaaggtgcagcccccgccagccccccaaccaaagcctcccgcaccaagtccccg
ggccccgccaggcgcctctccataaagatgaagaagctgccggaactgcggcgccgcctg
agcctgcgaggcccccgggctggcagggagcgcgagagggctgcccctgcgggctccgtc
atcagccgctaccacctggacagcagcgtggggggccccgggccggcagcagggcctggg
ggcacccggagcccgagggccggttacctcagcgacggggactcaccggagcgcccagct
gggcccccatcacccacctccttccggccctacgaggtgggtcccgcagcccgggcaccc
ccggccgcactctggggccgcctcagcctgcacctgtacggtctcggggggctgcggcca
gcgccgggggccacccccagggacctctgctgcctactgcaagtggatggggaggccagg
gcccgaacagggccactgcgaggggggccggacttcctgcggctggaccacaccttccac
ctggagctggaggccgccaggctcctgcgcgccctggtgcttgcgtgggaccctggcgtg
agaaggcaccggccctgtgcccagggcaccgtgctgctgcccacggtcttccgagggtgc
caggcccaacagctggccgtgcgcctggagcctcaggggctgctgtatgccaagctgacc
ctgtcggagcagcaggaagcccctgccacagctgagccccgcgtctttgggctgcccctg
ccactgctggtggagcgggagcggccccccggccaggtgcccctcatcatccagaagtgc
gttgggcagatcgagcgccgagggctgcgggtagtgggactgtaccgtctttgtggctca
gcggcagtgaagaaagagcttcgggatgcctttgagcgggacagtgcagcggtctgccta
tctgaggacctgtaccccgatatcaatgtcatcactggcatcctcaaggattatcttcga
gagttgcccaccccactcatcacccagcccctgtataaggtggtactggaggccatggcc
cgggaccccccaaacagagttccccccaccactgagggcacccgagggctcctcagctgc
ctgccagatgtggaaagggccacgctgacgcttctcctggaccacctgcgcctcgtctcc
tccttccatgcctacaaccgcatgaccccacagaacttggccgtgtgcttcgggcctgtg
ctgctgccggcacgccaggcgcccacaaggcctcgtgcccgcagctccggcccaggcctt
gccagtgcagtggacttcaagcaccacatcgaggtgctgcactacctgctgcagtcttgg
ccagatccccgcctgccccgacaatctccagatgtcgcgccttacttgcgacccaaacga
cagccacctctgcacctgccgctggcagaccccgaagtggtgactcggccccgcggtcga
ggaggccccgaaagccccccgagcaaccgctacgccggcgactggagcgtttgcgggcgg
gacttcctgccctgtgggcgggatttcctgtccgggccagactacgaccacgtgacgggc
agtgacagcgaggacgaggacgaggaggtcggcgagccgagggtcaccggtgacttcgaa
gacgacttcgatgcgcccttcaacccgcacctgaatctcaaagacttcgacgccctcatc
ctggatctggagagagagctctccaagcaaatcaacgtgtgcctctga

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Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (14)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
Protein sequence (12)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (10)   
DNA sequence (30)   
   RefSeq(nuc) (10)   
   GenBank (10)   
   EMBL (10)   
Protein domain (1)   
   Pfam (1)   
All databases (72)   

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