KEGG   Homo sapiens (human): 90378
Entry
90378             CDS       T01001                                 
Symbol
SAMD1
Name
(RefSeq) sterile alpha motif domain containing 1
  KO
K26266  sterile alpha motif domain-containing protein 1
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    90378 (SAMD1)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   Polycomb repressive complex (PRC) and associated proteins
    Other PRC associated proteins
     90378 (SAMD1)
SSDB
Motif
Pfam: SAMD1_WH SAM_1 SAM_PNT SAM_2 PTPRCAP Pox_Ag35
Other DBs
NCBI-GeneID: 90378
NCBI-ProteinID: NP_612361
OMIM: 620206
HGNC: 17958
Ensembl: ENSG00000141858
UniProt: Q6SPF0
Structure
Position
19:complement(14087851..14090751)
AA seq 538 aa
MAGPPALPPPETAAAATTAAAASSSAASPHYQEWILDTIDSLRSRKARPDLERICRMVRR
RHGPEPERTRAELEKLIQQRAVLRVSYKGSISYRNAARVQPPRRGATPPAPPRAPRGAPA
AAAAAAPPPTPAPPPPPAPVAAAAPARAPRAAAAAATAPPSPGPAQPGPRAQRAAPLAAP
PPAPAAPPAVAPPAGPRRAPPPAVAAREPPLPPPPQPPAPPQQQQPPPPQPQPPPEGGAV
RAGGAARPVSLREVVRYLGGSGGAGGRLTRGRVQGLLEEEAAARGRLERTRLGALALPRG
DRPGRAPPAASARPSRSKRGGEERVLEKEEEEDDDEDEDEEDDVSEGSEVPESDRPAGAQ
HHQLNGERGPQSAKERVKEWTPCGPHQGQDEGRGPAPGSGTRQVFSMAAMNKEGGTASVA
TGPDSPSPVPLPPGKPALPGADGTPFGCPPGRKEKPSDPVEWTVMDVVEYFTEAGFPEQA
TAFQEQEIDGKSLLLMQRTDVLTGLSIRLGPALKIYEHHIKVLQQGHFEDDDPDGFLG
NT seq 1617 nt   +upstreamnt  +downstreamnt
atggcggggcccccggccctacccccgccggagacggcggcggccgccaccacggcggcc
gccgcctcgtcgtccgccgcttccccgcactaccaagagtggatcctggacaccatcgac
tcgctgcgctcgcgcaaggcgcggccggacctggagcgcatctgccggatggtgcggcgg
cggcacggcccggagccggagcgcacgcgcgccgagctcgagaaactgatccagcagcgc
gccgtgctccgggtcagctacaaggggagcatctcgtaccgcaacgcggcgcgcgtccag
ccgccccggcgcggagccaccccgccggccccgccgcgcgccccccgcggggcccccgcc
gccgccgccgccgccgcgccgccgcccacgcccgccccgccgccaccgcccgcgcccgtc
gccgccgccgccccggcccgggcgccccgcgcggccgccgccgccgccacagcgcccccc
tcgcctggccccgcgcagccgggcccccgcgcgcagcgggccgcgcccctggccgcgccg
ccgcccgcgccagccgctcccccggcggtggcgcccccggccggcccgcgccgcgccccc
ccgcccgccgtcgccgcccgggagccgccgctgccgccgccgccacagccgccggcgccg
ccacagcagcagcagccgccgccgccgcagccacagccgccgccggaggggggcgcggtg
cgggccggcggcgcggcgcggcccgtgagcctgcgggaagtcgtgcgctacctcgggggc
agcggcggcgccggcggtcgcctaacccgcggccgcgtgcaggggctgctggaggaggag
gcggcggctcgaggccgtctggagcgcacccgtctcggagcgcttgcgctgccccgcggg
gacaggcccggacgggcgccgccggccgccagcgcccgcccgtctcgcagcaagagaggt
ggagaagagcgagtacttgagaaagaagaggaagaagatgatgatgaagatgaagatgaa
gaagatgatgtgtcagagggctctgaagtgcccgagagtgaccgtcctgcaggtgcccag
caccaccagcttaacggcgagcggggacctcagagtgccaaggagagggtcaaggagtgg
accccctgcggaccgcaccagggccaggatgaagggcgggggccagccccgggcagcggc
acccgccaggtgttctccatggcagccatgaacaaggaagggggaacagcttctgttgcc
accgggccagactccccgtcccccgtgcctttgcccccaggcaaaccagccctacctggg
gccgacgggaccccctttggctgtcctcccgggcgcaaagagaagccatctgatcccgtc
gagtggaccgtgatggatgtcgtcgaatattttactgaggctggattcccggagcaggcg
acagctttccaagagcaggaaattgatggcaaatctttgctgctcatgcagcgcacagat
gtgctcaccggcctgtccatccgcctcgggccagccctgaaaatctacgagcaccacatc
aaggtgcttcagcaaggccactttgaggatgatgaccccgatggcttcttaggctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (123)   
   KEGG ORTHOLOGY (1)   
   RefGene (112)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (13)   
   RefSeq(nuc) (3)   
   GenBank (5)   
   EMBL (5)   
3D Structure (3)   
   PDB (3)   
Protein domain (6)   
   Pfam (6)   
All databases (154)   

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