KEGG   Homo sapiens (human): 100526740
Entry
100526740         CDS       T01001                                 
Symbol
ATP5MF-PTCD1, ATP5J2-PTCD1
Name
(RefSeq) ATP5MF-PTCD1 readthrough
  KO
K17710  pentatricopeptide repeat domain-containing protein 1
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hsa03016]
    100526740 (ATP5MF-PTCD1)
   03029 Mitochondrial biogenesis [BR:hsa03029]
    100526740 (ATP5MF-PTCD1)
Transfer RNA biogenesis [BR:hsa03016]
 Eukaryotic type
  3'processing and CCA adding factors
   3'processing factors
    100526740 (ATP5MF-PTCD1)
Mitochondrial biogenesis [BR:hsa03029]
 Mitochondrial DNA transcription, translation, and replication factors
  Mitochondrial transcription and translation factors
   Other mitochondrial DNA transcription and translation factors
    100526740 (ATP5MF-PTCD1)
SSDB
Motif
Pfam: PPR_2 PPR_3 PPR_long PPR WRW PPR_1 MNE1
Other DBs
NCBI-GeneID: 100526740
NCBI-ProteinID: NP_001185808
HGNC: 38844
Ensembl: ENSG00000248919
UniProt: G3V325 B4DJ38
Position
7:complement(99416739..99466167)
AA seq 749 aa
MASVVPVKDKKLLEVKLGELPSWILMRDFSPSGIFGAFQRGPGGTGKPEMDFVRLARLFA
RARPMGLFILQHLDPCRARWAGGREGLMRPMWAPFSSSSSQLPLGQERQENTGSLGSDPS
HSNSTATQEEDEEEEESFGTLSDKYSSRRLFRKSAAQFHNLRFGERRDEQMEPEPKLWRG
RRNTPYWYFLQCKHLIKEGKLVEALDLFERQMLKEERLQPMESNYTVLIGGCGRVGYLKK
AFNLYNQMKKRDLEPSDATYTALFNVCAESPWKDSALQSALKLRQQLQAKNFELNLKTYH
ALLKMAAKCADLRMCLDVFKEIIHKGHVVTEETFSFLLMGCIQDKKTGFRYALQVWRLML
SLGLQPSRDSYNLLLVAARDCGLGDPQVASELLLKPREEATVLQPPVSRQRPRRTAQAKA
GNLMSAMLHVEALERQLFLEPSQALGPPEPPEARVPGKAQPEVDTKAEPSHTAALTAVAL
KPPPVELEVNLLTPGAVPPTVVSFGTVTTPADRLALIGGLEGFLSKMAEHRQQPDIRTLT
LLAEVVESGSPAESLLLALLDEHQVEADLTFFNTLVRKKSKLGDLEGAKALLPVLAKRGL
VPNLQTFCNLAIGCHRPKDGLQLLTDMKKSQVTPNTHIYSALINAAIRKLNYTYLISILK
DMKQNRVPVNEVVIRQLEFAAQYPPTFDRYQGKNTYLEKIDGFRAYYKQWLTVMPAEETP
HPWQKFRTKPQGDQDTGKEADDGCALGGR
NT seq 2250 nt   +upstreamnt  +downstreamnt
atggcgtcagttgtaccagtgaaggacaagaaacttctggaggtcaaactgggggagctg
ccaagctggatcttgatgcgggacttcagtcctagtggcattttcggagcgtttcaaaga
ggccctggagggacaggaaagccagaaatggacttcgtgagactcgctcgactgttcgcc
agggcccgccccatgggactgttcatcctgcaacacctggacccctgtagagccaggtgg
gcaggaggcagggaggggctgatgcggccaatgtgggcgcccttcagcagctcctcctct
cagctgcccctcggccaggagcgtcaggaaaacacgggcagcctgggctctgacccgagc
cactccaactccacggccacgcaggaagaagacgaggaggaggaggagagttttgggacc
ctctctgacaaatactcctcccggagactattccgcaaatccgcagcccagttccataac
ctgcggtttggggaacggagagatgagcaaatggaaccggagcccaaattatggcgaggc
cggagaaacaccccgtactggtacttcttgcagtgcaaacacctgatcaaggaagggaag
ctggttgaagccctggacctgtttgagaggcagatgctgaaggaggagcgattgcagccc
atggagagcaactacacggtgctgattgggggctgcgggcgggttggctacctgaagaag
gccttcaacctctacaaccagatgaaaaagcgggacctggagccctcggacgccacctac
acggccctgttcaacgtctgtgccgagtccccctggaaggactcagctctacagagcgcc
ctgaagctccggcagcagctgcaggccaaaaacttcgagctcaacttgaaaacataccac
gcgctgctgaagatggctgccaagtgcgcagaccttaggatgtgcctcgatgtgttcaag
gaaatcatccacaaagggcacgtggtcacagaggagaccttcagtttcctgctcatgggc
tgcatccaagacaagaagacaggcttccggtacgccctccaggtgtggcggctgatgctg
agtctagggctacagccgagccgggacagctacaacctgctgttggtggcagctcgggac
tgtggcctaggggacccccaggtggcctcagagctgcttctgaagcccagggaggaggcg
actgtgcttcagcccccagtgagcaggcagcggccaaggaggacagcccaggccaaggca
ggcaacctcatgtcagccatgctgcatgtggaggccctggagaggcagctgtttctggaa
ccttctcaggcacttgggcctccagagcctccggaagccagagtgcccggcaaggcccaa
ccagaggtggatactaaggcagagcccagccacacagcagccctcaccgcagtggccctg
aagccacctcccgtggagctggaagtcaacctcctgacccccggggccgttccccctaca
gtggtctcctttggaacggtgaccaccccagctgaccggctggccttgatagggggcctg
gagggcttcctgagcaagatggcagagcacaggcagcagcccgacatcaggaccctcacg
ctactggccgaggtggtggagtccgggagtcctgcagagtccttgctgctggccctcctg
gatgagcaccaggtagaggccgacctgacattctttaacacgctggtgagaaagaagagc
aagctgggagacctggagggggccaaggcgctgttgccggtcctggcaaagaggggcctc
gtccccaacctgcagacattctgcaacctggccatcgggtgccacaggccgaaggacggt
ctacagcttctcacagacatgaagaagtcccaggtgacccccaacactcacatctacagt
gccctcatcaacgcggccatcaggaagctgaactacacctatctcatcagcatcttgaag
gacatgaagcagaacagggtcccggtgaacgaagtggtcatccgccagctggagtttgca
gcccagtaccctcccacctttgaccggtaccaagggaagaacacctacctggagaagatt
gacggcttccgagcctattacaagcagtggctgacagtgatgcccgcagaggaaaccccg
cacccctggcagaagttccggaccaagccccagggggaccaggacaccggcaaggaggct
gatgacggatgtgcccttgggggcaggtga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (2)   
   RefSeq(pep) (1)   
DNA sequence (3)   
   RefSeq(nuc) (1)   
   GenBank (1)   
   EMBL (1)   
Protein domain (7)   
   Pfam (7)   
All databases (32)   

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