KEGG   Homo sapiens (human): 10250
Entry
10250             CDS       T01001                                 
Symbol
SRRM1, 160-KD, POP101, SRM160
Name
(RefSeq) serine and arginine repetitive matrix 1
  KO
K13171  serine/arginine repetitive matrix protein 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03013  Nucleocytoplasmic transport
hsa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    10250 (SRRM1)
   03015 mRNA surveillance pathway
    10250 (SRRM1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    10250 (SRRM1)
   03041 Spliceosome [BR:hsa03041]
    10250 (SRRM1)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    EJC complex
     10250 (SRRM1)
Spliceosome [BR:hsa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   SR-related proteins
    10250 (SRRM1)
SSDB
Motif
Pfam: PWI
Other DBs
NCBI-GeneID: 10250
NCBI-ProteinID: NP_005830
OMIM: 605975
HGNC: 16638
Ensembl: ENSG00000133226
UniProt: Q8IYB3 A0A0S2Z4W1
Structure
Position
1:24643302..24673281
AA seq 904 aa
MDAGFFRGTSAEQDNRFSNKQKKLLKQLKFAECLEKKVDMSKVNLEVIKPWITKRVTEIL
GFEDDVVIEFIFNQLEVKNPDSKMMQINLTGFLNGKNAREFMGELWPLLLSAQENIAGIP
SAFLELKKEEIKQRQIEQEKLASMKKQDEDKDKRDKEEKESSREKRERSRSPRRRKSRSP
SPRRRSSPVRRERKRSHSRSPRHRTKSRSPSPAPEKKEKTPELPEPSVKVKEPSVQEATS
TSDILKVPKPEPIPEPKEPSPEKNSKKEKEKEKTRPRSRSRSKSRSRTRSRSPSHTRPRR
RHRSRSRSYSPRRRPSPRRRPSPRRRTPPRRMPPPPRHRRSRSPVRRRRRSSASLSGSSS
SSSSSRSRSPPKKPPKRTSSPPRKTRRLSPSASPPRRRHRPSPPATPPPKTRHSPTPQQS
NRTRKSRVSVSPGRTSGKVTKHKGTEKRESPSPAPKPRKVELSESEEDKGGKMAAADSVQ
QRRQYRRQNQQSSSDSGSSSSSEDERPKRSHVKNGEVGRRRRHSPSRSASPSPRKRQKET
SPRGRRRRSPSPPPTRRRRSPSPAPPPRRRRTPTPPPRRRTPSPPPRRRSPSPRRYSPPI
QRRYSPSPPPKRRTASPPPPPKRRASPSPPPKRRVSHSPPPKQRSSPVTKRRSPSLSSKH
RKGSSPSRSTREARSPQPNKRHSPSPRPRAPQTSSSPPPVRRGASSSPQRRQSPSPSTRP
IRRVSRTPEPKKIKKAASPSPQSVRRVSSSRSVSGSPEPAAKKPPAPPSPVQSQSPSTNW
SPAVPVKKAKSPTPSPSPPRNSDQEGGGKKKKKKKDKKHKKDKKHKKHKKHKKEKAVAAA
AAAAVTPAAIAAATTTLAQEEPVAAPEPKKETESEAEDNLDDLEKHLREKALRSMRKAQV
SPQS
NT seq 2715 nt   +upstreamnt  +downstreamnt
atggacgcgggatttttccgcggaacaagtgcagaacaggataatcggttcagcaacaaa
cagaagaaactactgaagcagctgaaatttgcagaatgcctagaaaaaaaggtggacatg
agcaaagtaaatttggaggttataaagccttggataacaaaaagagtaacggaaatcctt
gggtttgaagatgatgttgtgattgagtttatattcaaccagctggaagtgaagaatcca
gactccaaaatgatgcaaatcaacctgactggatttttgaatggaaaaaatgctcgagaa
tttatgggagaactgtggcccctgctgctaagtgcacaagaaaacatcgcgggaatccct
tctgctttcctagaactgaagaaagaagaaataaaacaaagacagattgaacaagaaaaa
ctggcatctatgaaaaagcaagatgaagacaaagataaaagagataaggaagaaaaagaa
agcagcagagaaaaaagggagcggtctcgtagcccaagaagacgcaaatccagatctcct
tcccctagaagacgatcttcccctgtcaggagagagagaaagcgcagtcattctcgatct
ccccgtcacagaaccaagagccggagtccttcccctgctccagaaaagaaggaaaaaact
ccagagctcccagaaccttcagtgaaagtaaaagaaccttcagtacaagaggctacttct
actagtgacattctgaaagttcccaaacctgaacctataccagagcctaaagaaccttct
ccggaaaaaaattccaaaaaagaaaaggagaaggagaagacccgaccacgatctcggtca
cgctccaaatcaagatcccggacgcggtcccgctctccttctcacactcgacctagacgg
cgccatagatcccgatcaagatcgtattcacctagaaggcggccaagcccaagaaggcgg
ccatctcctcgaagaagaactccgccaagaagaatgcctcctccaccaaggcatagaagg
agtagatctccagtaagacgaagaagacgttcgtcagcatccttgtctgggagtagctca
tcatcctcttcatctcgttcacggtcaccaccaaagaagcctcccaagaggacatccagc
ccccctcggaaaactcgtaggttatctccttcagcaagtcctccaaggcgaaggcacagg
ccatcacctcctgcaactccaccacccaaaactcggcattcccctacaccccagcagtca
aaccgtacaagaaaaagtcgtgtttctgtgtctccagggagaacttcaggtaaagtgaca
aaacataaaggtactgagaaaagagaatccccttcaccagcaccgaagcctagaaaagta
gagttatctgaatcggaagaagataaaggtggcaaaatggctgcagcagattctgtgcag
cagagacgccaatacagacgacaaaaccagcagtcttcatctgactctggctcctcctcc
tcctcagaagatgaacgacccaagagatcccatgtgaagaatggtgaggttggcaggcgg
cggagacattccccttcccggagtgcttctccatcaccacgaaagcgccaaaaagagact
tcccctcgtggtagacggaggagaagtccatccccaccacccaccagaaggcgacggtct
ccttctcccgcccctcctcctcgacggcgcaggactcccacaccaccaccacgacgaagg
actccttctcctcccccacgtcggcgctcaccttctcctagaagatactctcctccaata
cagaggagatactctccttctccacctccaaagagaagaacggcttcacctcctccccct
cctaaacgaagagcatcaccatctccaccaccaaagcggcgggtctcccattctccacct
cccaaacaaagaagctccccagtcaccaagagacgttcaccttcattatcatccaagcat
aggaaagggtcttccccaagccgctctacccgggaggcccgatcaccacaaccaaacaaa
cggcattcgccctcaccacggcctcgagctcctcagacctcctcaagtcctccacccgtt
cgaagaggagcgtcgtcatcaccccaaagaaggcagtccccgtctccaagtactaggccc
attaggagagtctccaggactccggaacctaaaaagataaaaaaggctgcttccccaagc
ccacagtctgtaagaagggtctcatcctcccgatctgtctccgggtctcctgagccagca
gctaaaaagcccccagcacctccatcccccgtccagtctcagtcaccgtctacaaactgg
tcaccagctgtaccggtcaaaaaggccaaaagcccaacaccgagcccatcaccgccaaga
aattcagatcaggaaggaggtggaaagaaaaagaagaaaaagaaggacaagaaacacaaa
aaggataagaagcacaagaagcacaaaaaacacaagaaggaaaaggctgtggctgcagct
gctgcagctgctgtgacccctgcagccattgcagctgccacaaccacattagcacaggaa
gagccagtggcagcgccagagccgaagaaggagactgaaagtgaagctgaagataacctt
gatgatttagaaaagcacctgcgtgaaaaggccctgagatcaatgaggaaggcccaagtg
tccccacagtcttag

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Ontology (3)   
   KEGG BRITE (3)   
Pathway (2)   
   KEGG PATHWAY (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (204)   
   KEGG ORTHOLOGY (1)   
   RefGene (191)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (7)   
   OC (1)   
Protein sequence (86)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (83)   
DNA sequence (132)   
   RefSeq(nuc) (98)   
   GenBank (17)   
   EMBL (17)   
3D Structure (7)   
   PDB (7)   
Protein domain (1)   
   Pfam (1)   
All databases (437)   

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