KEGG   Homo sapiens (human): 10492
Entry
10492             CDS       T01001                                 
Symbol
SYNCRIP, GRY-RBP, GRYRBP, HNRNPQ, HNRPQ1, NSAP1, PP68, hnRNP-Q
Name
(RefSeq) synaptotagmin binding cytoplasmic RNA interacting protein
  KO
K13160  heterogeneous nuclear ribonucleoprotein Q
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    10492 (SYNCRIP)
Spliceosome [BR:hsa03041]
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   hnRNP proteins
    10492 (SYNCRIP)
SSDB
Motif
Pfam: RRM_1 hnRNP_Q_AcD RRM_7 RRM_5 RRM_occluded
Other DBs
NCBI-GeneID: 10492
NCBI-ProteinID: NP_006363
OMIM: 616686
HGNC: 16918
Ensembl: ENSG00000135316
UniProt: O60506
Structure
Position
6:complement(85607784..85643870)
AA seq 623 aa
MATEHVNGNGTEEPMDTTSAVIHSENFQTLLDAGLPQKVAEKLDEIYVAGLVAHSDLDER
AIEALKEFNEDGALAVLQQFKDSDLSHVQNKSAFLCGVMKTYRQREKQGTKVADSSKGPD
EAKIKALLERTGYTLDVTTGQRKYGGPPPDSVYSGQQPSVGTEIFVGKIPRDLFEDELVP
LFEKAGPIWDLRLMMDPLTGLNRGYAFVTFCTKEAAQEAVKLYNNHEIRSGKHIGVCISV
ANNRLFVGSIPKSKTKEQILEEFSKVTEGLTDVILYHQPDDKKKNRGFCFLEYEDHKTAA
QARRRLMSGKVKVWGNVGTVEWADPIEDPDPEVMAKVKVLFVRNLANTVTEEILEKAFSQ
FGKLERVKKLKDYAFIHFDERDGAVKAMEEMNGKDLEGENIEIVFAKPPDQKRKERKAQR
QAAKNQMYDDYYYYGPPHMPPPTRGRGRGGRGGYGYPPDYYGYEDYYDYYGYDYHNYRGG
YEDPYYGYEDFQVGARGRGGRGARGAAPSRGRGAAPPRGRAGYSQRGGPGSARGVRGARG
GAQQQRGRGVRGARGGRGGNVGGKRKADGYNQPDSKRRQTNNQNWGSQPIAQQPLQGGDH
SGNYGYKSENQEFYQDTFGQQWK
NT seq 1872 nt   +upstreamnt  +downstreamnt
atggctacagaacatgttaatggaaatggtactgaagagcccatggatactacttctgca
gttatccattcagaaaattttcagacattgcttgatgctggtttaccacagaaagttgct
gaaaaactagatgaaatttacgttgcagggctagttgcacatagtgatttagatgaaaga
gctattgaagctttaaaagaattcaatgaagacggtgcattggcagttcttcaacagttt
aaagacagtgatctctctcatgttcagaacaaaagtgcctttttatgtggagtcatgaag
acttacaggcagagagaaaaacaagggaccaaagtagcagattctagtaaaggaccagat
gaggcaaaaattaaggcactcttggaaagaacaggctacacacttgatgtgaccactgga
cagaggaagtatggaggaccacctccagattccgtttattcaggtcagcagccttctgtt
ggcactgagatatttgtgggaaagatcccaagagatctatttgaggatgaacttgttcca
ttatttgagaaagctggacctatatgggatcttcgtctaatgatggatccactcactggt
ctcaatagaggttatgcgtttgtcactttttgtacaaaagaagcagctcaggaggctgtt
aaactgtataataatcatgaaattcgttctggaaaacatattggtgtctgcatctcagtt
gccaacaataggctttttgtgggctctattcctaagagtaaaaccaaggaacagattctt
gaagaatttagcaaagtaacagagggtcttacagacgtcattttataccaccaaccggat
gacaagaaaaaaaacagaggcttttgctttcttgaatatgaagatcacaaaacagctgcc
caggcaaggcgtaggttaatgagtggtaaagtcaaggtctgggggaatgttggaactgtt
gaatgggctgatcctatagaagatcctgatcctgaggttatggcaaaggtaaaagtgctg
tttgtacgcaaccttgccaatactgtaacagaagagattttagaaaaggcatttagtcag
tttgggaaactggaacgagtgaagaagttaaaagattatgcgttcattcattttgatgag
cgagatggtgctgtcaaggctatggaagaaatgaatggcaaagacttggagggagaaaat
attgaaattgtttttgccaagccaccagatcagaaaaggaaagaaagaaaagctcagagg
caagcagcaaaaaatcaaatgtatgacgattactactattatggtccacctcatatgccc
cctccaacaagaggtcgagggcgtggaggtagaggtggttatggatatcctccagattat
tatggatatgaagattattatgattattatggttatgattaccataactatcgtggtgga
tatgaagatccatactatggttatgaagattttcaagttggagctagaggaaggggtggt
agaggagcaaggggtgctgctccatccagaggtcgtggggctgctcctccccgcggtaga
gccggttattcacagagaggaggtcctggatcagcaagaggcgttcgaggtgcgagagga
ggtgcccaacaacaaagaggccgcggggtacgtggtgcgaggggtggccgcggtggaaat
gtaggaggaaagcgcaaagctgatgggtacaaccagccagattccaagcggcgccagacc
aataatcagaactggggctcccaacccattgctcagcaaccgctccaaggtggtgatcat
tctggtaactatggttacaaatctgaaaaccaggagttttatcaggatacttttgggcaa
cagtggaagtag

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Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (27)   
   KEGG ORTHOLOGY (1)   
   RefGene (16)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (5)   
   OC (1)   
Protein sequence (28)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (26)   
DNA sequence (72)   
   RefSeq(nuc) (26)   
   GenBank (23)   
   EMBL (23)   
3D Structure (4)   
   PDB (4)   
Protein domain (5)   
   Pfam (5)   
All databases (140)   

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