KEGG   Homo sapiens (human): 11273
Entry
11273             CDS       T01001                                 
Symbol
ATXN2L, A2D, A2LG, A2LP, A2RP
Name
(RefSeq) ataxin 2 like
  KO
K23625  ataxin 2/2L
Organism
hsa  Homo sapiens (human)
Pathway
hsa05014  Amyotrophic lateral sclerosis
hsa05017  Spinocerebellar ataxia
hsa05022  Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09160 Human Diseases
  09164 Neurodegenerative disease
   05014 Amyotrophic lateral sclerosis
    11273 (ATXN2L)
   05017 Spinocerebellar ataxia
    11273 (ATXN2L)
   05022 Pathways of neurodegeneration - multiple diseases
    11273 (ATXN2L)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    11273 (ATXN2L)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     11273 (ATXN2L)
SSDB
Motif
Pfam: SM-ATX LsmAD PAM2
Other DBs
NCBI-GeneID: 11273
NCBI-ProteinID: NP_009176
OMIM: 607931
HGNC: 31326
Ensembl: ENSG00000168488
UniProt: Q8WWM7
Position
16:28822999..28837232
AA seq 1075 aa
MLKPQPLQQPSQPQQPPPTQQAVARRPPGGTSPPNGGLPGPLATSAAPPGPPAAASPCLG
PVAAAGSGLRRGAEGILAPQPPPPQQHQERPGAAAIGSARGQSTGKGPPQSPVFEGVYNN
SRMLHFLTAVVGSTCDVKVKNGTTYEGIFKTLSSKFELAVDAVHRKASEPAGGPRREDIV
DTMVFKPSDVMLVHFRNVDFNYATKDKFTDSAIAMNSKVNGEHKEKVLQRWEGGDSNSDD
YDLESDMSNGWDPNEMFKFNEENYGVKTTYDSSLSSYTVPLEKDNSEEFRQRELRAAQLA
REIESSPQYRLRIAMENDDGRTEEEKHSAVQRQGSGRESPSLASREGKYIPLPQRVREGP
RGGVRCSSSRGGRPGLSSLPPRGPHHLDNSSPGPGSEARGINGGPSRMSPKAQRPLRGAK
TLSSPSNRPSGETSVPPPPAVGRMYPPRSPKSAAPAPISASCPEPPIGSAVPTSSASIPV
TSSVSDPGVGSISPASPKISLAPTDVKELSTKEPGRTLEPQELARIAGKVPGLQNEQKRF
QLEELRKFGAQFKLQPSSSPENSLDPFPPRILKEEPKGKEKEVDGLLTSEPMGSPVSSKT
ESVSDKEDKPPLAPSGGTEGPEQPPPPCPSQTGSPPVGLIKGEDKDEGPVAEQVKKSTLN
PNAKEFNPTKPLLSVNKSTSTPTSPGPRTHSTPSIPVLTAGQSGLYSPQYISYIPQIHMG
PAVQAPQMYPYPVSNSVPGQQGKYRGAKGSLPPQRSDQHQPASAPPMMQAAAAAGPPLVA
ATPYSSYIPYNPQQFPGQPAMMQPMAHYPSQPVFAPMLQSNPRMLTSGSHPQAIVSSSTP
QYPSAEQPTPQALYATVHQSYPHHATQLHAHQPQPATTPTGSQPQSQHAAPSPVQHQAGQ
APHLGSGQPQQNLYHPGALTGTPPSLPPGPSAQSPQSSFPQPAAVYAIHHQQLPHGFTNM
AHVTQAHVQTGITAAPPPHPGAPHPPQVMLLHPPQSHGGPPQGAVPQSGVPALSASTPSP
YPYIGHPQGEQPGQAPGFPGGADDRIREFSLAGGIWHGRAEGLQVGQDARVLGGE
NT seq 3228 nt   +upstreamnt  +downstreamnt
atgttgaagcctcagccgctacaacagccctcccagccccagcagccgccccccacgcaa
caggccgtggcccgtcggccccccgggggcaccagccctcccaacggcggcctcccgggg
ccgctggccacctctgcggctcctcccgggcctccagcggccgcctccccctgcctgggg
cctgtggccgctgccgggagcgggctccgccggggagccgaaggcatcttggcgccgcag
ccgccgccgccgcagcaacaccaggagaggccgggggcagccgccatcggcagcgccagg
ggacagagcacaggaaagggacccccacagtcacctgtgtttgaaggcgtctacaacaat
tccagaatgctgcatttccttacagctgttgtgggctccacttgtgatgtaaaggtgaaa
aatggtaccacttatgagggtatcttcaagacgctaagctcaaagtttgaactagccgtg
gatgctgtgcaccggaaagcatctgagccagcaggtggccctcgtcgggaggacattgtg
gacaccatggtgtttaagccaagtgatgtcatgcttgttcacttccgaaatgttgacttc
aactatgctactaaagacaagttcaccgattcagccattgccatgaactcgaaagtgaat
ggggaacacaaagagaaggtgcttcagcgctgggaggggggtgacagcaacagcgacgac
tatgacctcgagtctgacatgtccaatggatgggaccccaatgaaatgttcaagttcaat
gaggagaactacggtgtgaagactacctatgatagcagtctttcttcttatacggtgccc
ttagaaaaggacaactcagaagagtttcgtcagcgagagctgcgtgcggcccagttggct
cgagagattgaatcaagcccccagtaccgcctacggatcgccatggagaacgacgatggg
cgcactgaagaggagaagcacagtgcagtccagcggcagggctcagggcgggagagcccc
agcttggcatccagggaggggaagtatatccctctgcctcaacgagtccgggaaggtccc
cggggaggagttcgatgcagcagctctcggggcggtcggcctggccttagctctttgcca
cctcgtggccctcaccatctggacaacagcagccctggcccaggttctgaggcccgtggt
atcaatggaggcccttcccgcatgtccccaaaggcacaacggcctctgagaggtgccaag
actctgtcttcgcccagtaataggccttctggagaaacttctgttccacctcctcctgca
gtgggccggatgtatcccccgcgttctcccaagtctgctgcccctgccccaatctcagct
tcctgtccagagcctcccatcggctcggcagtgccaacctcttcagcctccatccctgtg
acctcatcagtctcagatcctggagtgggctccatttctccagcttctccaaagatctcc
ctggcccccacagatgtaaaagaactctctaccaaggaacctgggagaactctggagccc
caggagctggctcggatagctgggaaagtccctggtcttcagaatgaacagaaacgattc
caactggaagaactgagaaagtttggggcccagtttaagcttcagcccagtagctcccct
gagaacagcctggatccttttcctccccggatcttaaaggaggagcccaaaggaaaggag
aaagaggttgatggtctgttgacttcagagcccatggggtctcccgtctcctccaagaca
gagtccgtatcggataaggaggacaaaccacccctggcaccatcaggaggcactgagggg
ccagagcagcccccaccaccttgtccaagccaaactggcagccccccggtgggcctcatc
aagggagaagacaaagatgagggccctgttgctgaacaagtaaagaaatcaacgttgaac
cctaatgctaaggagttcaatcctacaaagcctctgctgtctgtgaataaatccaccagt
accccaacttctccggggccccggactcattcaactccctccatcccggtgctgacagca
ggccagagtgggctatacagcccccagtacatctcctacatacctcagatccacatggga
ccagctgtgcaggcacctcagatgtatccatatcctgtatccaattcagtgcctgggcag
cagggcaagtaccggggagcaaaaggctcccttcctccgcagcgctcggaccaacaccag
ccagcctcagccccgccgatgatgcaggccgccgcggctgctggcccgcctctggtggct
gccacgccctattcttcctacatcccctacaaccctcagcagttcccaggccagccagcc
atgatgcagcccatggcccactacccctcacagccggtgtttgcccccatgcttcagagc
aacccacgcatgctgacgtcgggcagccatccccaggccatcgtgtcatcctctacccct
cagtacccttctgcagagcagcctaccccccaagccctttatgccactgttcaccagtcc
tacccacaccatgccacacagctccatgcccaccagccgcagccggctaccacgcctact
ggaagccagccgcagtcccagcatgcggcccccagtcctgtccagcatcaggcggggcag
gccccacacttgggcagtggacagccacagcagaatctgtaccacccaggggccctgaca
ggcacgccgccctctctgccaccgggaccttctgcccagtcccctcagagcagcttcccc
cagccagccgctgtgtatgccatccaccaccagcagctgccccacggcttcaccaacatg
gcccatgttacccaggcccatgtccaaactggaatcacagcagccccgccccctcaccct
ggggctccccacccgccccaggtgatgctgctgcacccaccccagagtcatggggggccc
ccccaaggcgcggtgccccagagtggggtgcctgcactctcagcttccacaccctcaccc
tacccctacatcggacacccccaaggtgagcagcctggccaggcgcctggatttccagga
ggagccgatgacaggattcgtgagttctcattagctgggggaatttggcatggaagagct
gaggggctgcaggtggggcaggatgcacgggttctgggtggggagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (3)   
   KEGG PATHWAY (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (42)   
   KEGG ORTHOLOGY (1)   
   RefGene (32)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (110)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (108)   
DNA sequence (150)   
   RefSeq(nuc) (108)   
   GenBank (21)   
   EMBL (21)   
Protein domain (3)   
   Pfam (3)   
All databases (312)   

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