KEGG   Homo sapiens (human): 11340
Entry
11340             CDS       T01001                                 
Symbol
EXOSC8, CIP3, EAP2, OIP2, PCH1C, RRP43, Rrp43p, bA421P11.3, p9
Name
(RefSeq) exosome component 8
  KO
K12586  exosome complex component RRP43
Organism
hsa  Homo sapiens (human)
Pathway
hsa03018  RNA degradation
Disease
H00897  Pontocerebellar hypoplasia
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    11340 (EXOSC8)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    11340 (EXOSC8)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA degradation factors
   3'-5' decay
    Core exosome factors
     11340 (EXOSC8)
SSDB
Motif
Pfam: RNase_PH RNase_PH_C
Other DBs
NCBI-GeneID: 11340
NCBI-ProteinID: NP_852480
OMIM: 606019
HGNC: 17035
Ensembl: ENSG00000120699
UniProt: Q96B26
Structure
Position
13:37000786..37009614
AA seq 276 aa
MAAGFKTVEPLEYYRRFLKENCRPDGRELGEFRTTTVNIGSISTADGSALVKLGNTTVIC
GVKAEFAAPSTDAPDKGYVVPNVDLPPLCSSRFRSGPPGEEAQVASQFIADVIENSQIIQ
KEDLCISPGKLVWVLYCDLICLDYDGNILDACTFALLAALKNVQLPEVTINEETALAEVN
LKKKSYLNIRTHPVATSFAVFDDTLLIVDPTGEEEHLATGTLTIVMDEEGKLCCLHKPGG
SGLTGAKLQDCMSRAVTRHKEVKKLMDEVIKSMKPK
NT seq 831 nt   +upstreamnt  +downstreamnt
atggcggctgggttcaaaaccgtggaacctctggagtattacaggagatttctgaaagag
aactgccgtcctgatggaagagaacttggtgaattcagaaccacaactgtcaacatcggt
tcaattagtaccgcagatggttctgctttagtgaagttgggaaatactacagtaatctgt
ggagttaaagcagaatttgcagcaccatcaacagatgcccctgataaaggatacgttgtt
cctaatgtggatctaccacccctgtgttcatcgagattccggtctggacctcctggagaa
gaggcccaagtggctagccagttcattgcagatgtcattgaaaattcacagataattcag
aaagaggacttatgcatttctccaggaaagcttgtctgggttctatactgtgatctcatt
tgcctcgactacgatggaaacattttggatgcctgcacatttgctttgctagcggcttta
aaaaatgtacagttgcctgaagttactataaatgaagaaactgctttagcagaagttaat
ttaaagaagaaaagttatttgaatattagaactcatccagttgcaacttcctttgctgtg
tttgatgacactttgcttatagttgaccctactggagaggaggaacatctggcaacagga
accttaacaatagtaatggatgaggaaggcaaactctgttgtcttcacaaaccaggtgga
agtgggctaactggagctaaacttcaggactgtatgagccgagcagttacaagacacaaa
gaagttaaaaaactgatggatgaagtaattaagagtatgaaacccaaataa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (26)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (13)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (17)   
   RefSeq(nuc) (1)   
   GenBank (8)   
   EMBL (8)   
3D Structure (4)   
   PDB (4)   
Protein domain (2)   
   Pfam (2)   
All databases (59)   

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