KEGG   Homo sapiens (human): 114780
Entry
114780            CDS       T01001                                 
Symbol
PKD1L2, PC1L2
Name
(RefSeq) polycystin 1 like 2 (gene/pseudogene)
  KO
K04988  polycystin 1L2
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04040 Ion channels [BR:hsa04040]
    114780 (PKD1L2)
Ion channels [BR:hsa04040]
 Voltage-gated cation channels
  Transient receptor potential channel (TRP)
   114780 (PKD1L2)
SSDB
Motif
Pfam: Polycystin_dom PKD_channel PLAT Gal_Lectin Lectin_C Ion_trans REJ GPS
Other DBs
NCBI-GeneID: 114780
NCBI-ProteinID: NP_443124
OMIM: 607894
HGNC: 21715
Ensembl: ENSG00000166473
UniProt: Q7Z442
Position
16:complement(81100875..81220394)
AA seq 2463 aa
MSAVGLVLLVLALRLRATTVKPEEGSFCSNSQVAFRDACYEFVPLGRTFRDAQSWCEGQG
GHLVFIQDEGTQWFLQKHISQDREWWIGLTWNLARNGTTEGPGTWLDTSNVTYSNWHGGQ
AAAAPDTCGHIGRGPSSEWVTSDCAQTFAFMCEFRVGQSLACEGLNATVHCGLGQVIQVQ
DAVYGRQNPHFCTQDAGRPSDLEQGCSWANVKEEVAGQCQELQSCQVAADETYFGNLCPT
QGSYLWVQYQCREALQLMVSSESFIFDNVTISLTWLLSPYIGNLSCIISTGDSHTFDPYN
PPSNVTHQFTSPGEFTVFAECTTSEWHVTAQRQVTVRDKMETLSVTACSGLSQSGAGPLC
QAVFGDPLWIQVELDGGTGVTYTVLLGDITLAESTTQKGSLPYNLILDRETQKLMGPGRH
RLEIQATGNTTTSTISRNITVHLVELLSGLQASWASDHLELGQDLLITISLAQGTPEELT
FEVAGLNATFSHEQVSFGEPFGICRLAVPVEGTFLVTMLVRNAFSNLSLEIGNITITAPS
GLQEPSGMNAEGKSKDKGDMEVYIQPGPYVDPFTTVTLGWPDNDKELRFQWSCGSCWALW
SSCVERQLLRTDQRELVVPASCLPPPDSAVTLRLAVLRGQELENRAEQCLYVSAPWELRP
RVSCERNCRPVNASKDILLRVTMGEDSPVAMFSWYLDNTPTEQAEPLLDACRLRGFWPRS
LTLLQSNTSTLLLNSSFLQSRGEVIRIRATALTRHAYGEDTYVISTVPPREVPACTIAPE
EGTVLTSFAIFCNASTALGPLEFCFCLESGSCLHCGPEPALPSVYLPLGEENNDFVLTVV
ISATNRAGDTQQTQAMAKVALGDTCVEDVAFQAAVSEKIPTALQGEGGPEQLLQLAKAVS
SMLNQEHESQGSGQSLSIDVRQKVREHVLGSLSAVTTGLEDVQRVQELAEVLREVTCRSK
ELTPSAQWEASLALQHASEALLTVSAKARPEDQRRQAATRDLFQAVGSVLEASLSNRPEE
PAEASSSQIATVLRLLRVMEHVQTTLLLGKLPGGLPAMLATPSISVYTNRIQPWSWQGSS
LRPDAADSATFMLPAASSLSSLEGGQEPVDIKIMSFPKSPFPARSHFDVSGTVGGLRVTS
PSGQLIPVKNLSENIEILLPRHSQRHSQPTVLNLTSPEALWVNVTSGEATLGIQLHWRPD
IALTLSLGYGYHPNKSSYDAQTHLVPMVAPDELPTWILSPQDLRFGEGVYYLTVVPESDL
EPAPGRDLTVGITTFLSHCVFWDEVQETWDDSGCQVGPRTSPYQTHCLCNHLTFFGSTFL
VMSNAINIHQTAELFATFEDNPVVVTTVGCLCVVYVLVVIWARRKDAQDQAKVKVTVLED
NDPFAQYHYLVTVYTGHRRGAATSSKVTVTLYGLDGEREPHHLADPDTPVFERGAVDAFL
LSTLFPLGELRSLRLWHDNSGDRPSWYVSRVLVYDLVMDRKWYFLCNSWLSINVGDCVLD
KVFPVATEQDRKQFSHLFFMKTSAGFQDGHIWYSIFSRCARSSFTRVQRVSCCFSLLLCT
MLTSIMFWGVPKDPAEQKMDLGKIEFTWQEVMIGLESSILMFPINLLIVQIFQNTRPRVA
KEQNTGKWDRGSPNLTPSPQPMEDGLLTPEAVTKDVSRIVSSLFKALKVPSPALGWDSVN
LMDINSLLALVEDVIYPQNTSGQVFWEEAKKREDPVTLTLGSSEMKEKSQCPKPKAARSG
PWKDSAYRQCLYLQLEHVEQELRLVGPRGFSQPHSHAQALRQLQTLKGGLGVQPGTWAPA
HASALQVSKPPQGLPWWCILVGWLLVAATSGVAAFFTMLYGLHYGRASSLRWLISMAVSF
VESMFVTQPLKVLGFAAFFALVLKRVDDEEDTVAPLPGHLLGPDPYALFRARRNSSRDVY
QPPLTAAIEKMKTTHLKEQKAFALIREILAYLGFLWMLLLVAYGQRDPSAYHLNRHLQHS
FTRGFSGVLGFREFFKWANTTLVSNLYGHPPGFITDGNSKLVGSAQIRQVRVQESSCPLA
QQPQAYLNGCRAPYSLDAEDMADYGEGWNATTLSNGSSFPQAWQYQSQDQRQGYPIWGKL
TVYRGGGYVVPLGTDRQSTSRILRYLFDNTWLDALTRAVFVESTVYNANVNLFCIVTLTL
ETSALGTFFTHAALQSLRLYPFTDGWHPFVVAAELIYFLFLLYYMVVQGKRMSKETWGYF
CSKWNLLELAIILASWSALAVFVKRAVLAERDLQRCRNHREEGISFSETAAADAALGYII
AFLVLLSTVKLWHLLRLNPKMNMITAALRRAWGDISGFMIVILTMLLAYSIASNLIFGWK
LRSYKTLFDAAETMVSLQLGIFNYEEVLDYSPVLGSFLIGSCIVFMTFVVLNLFISVILV
AFSEEQKYYQLSEEGEIVDLLLMKILSFLGIKSKREEPGSSREQPGSLSQTRHSRPAQAL
PKD
NT seq 7392 nt   +upstreamnt  +downstreamnt
atgagtgcagtgggcttggtactcctggtgcttgctctgaggcttagggccaccactgtt
aagccagaggaaggcagcttttgctctaacagccaggtggccttcagagatgcttgctat
gaatttgtgccactcggacgcaccttccgtgatgcccagagctggtgcgaggggcaagga
ggccatttggtcttcattcaggacgaaggcacccagtggtttctgcagaagcacatctcc
caggacagggaatggtggattggactcacgtggaacttggcacggaatggaaccacggag
gggccggggacttggttggacacctccaatgtgacctacagcaactggcatggagggcag
gccgccgctgcccctgacacctgcggccacatcgggagaggcccttcctctgagtgggtg
acctcggactgcgcccagaccttcgccttcatgtgcgagttccgggttggccagagcctg
gcctgcgagggactcaatgccaccgtgcactgtggcttggggcaggtcatccaggtccag
gatgccgtctacgggcgccagaatccccatttctgcacccaggatgccgggcgtccttca
gatctggagcagggatgcagctgggccaacgtcaaggaggaggtggcaggccagtgccag
gagctacagtcatgccaggtggcagcagatgagacctactttggaaacctgtgtccgact
cagggcagttacctgtgggtgcagtaccagtgccgggaagccctgcagctgatggtgtcc
agtgagagtttcatctttgacaatgtcaccatctccctgacgtggctcctctcaccctac
ataggaaacctgtcctgtataattagtacaggagacagccacacttttgatccctacaac
ccgccgagcaatgtgacccaccagttcacatctcctggggaattcaccgtgtttgctgaa
tgcacaaccagtgagtggcatgtgacagctcagaggcaggtgaccgtgcgagacaagatg
gagacgctcagtgtgactgcatgctccggcctgtcccagtcaggagccggccctctctgc
caggctgtctttggggatcctctgtggattcaggtggagcttgatggaggaacaggagtg
acttacactgtgcttttgggtgacataaccctggccgagtccaccacccaaaagggctcg
ctaccgtacaatctgatcctggacagagaaacccagaaactgatgggccctgggaggcac
cgcctggagatccaagccaccggcaacaccaccacctctacaatctccagaaacattaca
gtccacttggtggagctgctgtcagggctgcaggcctcctgggcttctgaccatttggag
cttggacaggacctattgatcaccatctcattggctcagggcaccccggaagagctgacc
tttgaggtggctggactcaatgcaaccttctcccacgagcaagtgagctttggagagcca
tttgggatttgccgcctggctgttccggttgaaggcacctttctggtcaccatgctggtg
aggaatgccttctccaacctgagtttggaaatcgggaacatcactatcacagccccttcc
ggtctccaagaaccatctgggatgaatgctgaaggaaagagtaaagataaaggcgatatg
gaggtgtacatccaacctggtccatatgtggatcctttcacgacagtgaccctgggctgg
ccagacaatgacaaggagttacgcttccaatggtcatgtgggtcttgctgggctctgtgg
agcagctgtgttgagaggcagctgcttcgcacagaccagagggagctggtggttccagca
tcctgcctgccgccgcctgactctgctgtcaccctgcgcctggctgttctgagaggccaa
gagctggagaacagggcagagcagtgcctctacgtgtctgcgccctgggaactcaggcct
cgagtcagctgtgagaggaactgcaggccagttaatgccagcaaagacattctgctcagg
gtcaccatgggggaggactctccagtggctatgttcagctggtatttggacaacacccca
acagagcaggctgagcccctcctggatgcctgcagactcagaggattttggccaaggtcc
ttaaccctcctccagagcaacacctccacgttgctgttgaacagctcgtttctgcagtcc
cggggagaggtcatccgaatcagagccacagcactgaccaggcatgcctatggggaggac
acctatgtgatcagcactgtgcctccccgtgaggtgcctgcctgcactattgccccagag
gagggcaccgttctgacgagctttgccatcttctgcaacgcctccacagccctgggaccc
ctggagttctgcttctgtctggaatcaggttcctgcctacactgtggccctgaacctgcc
ctcccatcagtgtatctgccacttggagaggagaacaatgactttgtgctgacagtagtt
atttctgccaccaatcgtgcaggggacacgcagcagacccaggccatggctaaggtggca
ctcggagacacatgtgttgaggatgtagcattccaggctgccgtgtcagagaaaatcccc
acagctctgcaaggcgagggtggccccgagcagctcctccagctggccaaggctgtgtcc
tccatgctgaaccaagagcatgaaagccagggctcaggacagtcactgagcatagacgtc
agacagaaggtcagagagcatgtgctgggatcactgtctgcagtcaccaccggcttggag
gacgtgcagagggtgcaggagctggccgaggtgctgagagaggtgacctgccggagtaag
gaactcacaccctcggcccagtgggaggccagcttggctctacagcatgccagtgaggcc
ctgttgacagtgagtgccaaggcccgccctgaggaccagaggcgccaggcagccaccagg
gacctgtttcaggctgtgggcagtgtgctggaagcttccctgagcaacagaccagaagag
cctgcggaggccagcagcagccagattgccacagtgctgcggctgcttcgagtcatggag
catgtgcagaccaccctcctgctgggaaaactgccagggggccttccagccatgctggcc
accccctccatctctgtgtacacaaacagaatacaaccctggagttggcaaggctcctcc
ctgcgccctgatgccgcagactctgcaaccttcatgctgcccgctgcctcctccctcagc
tctctggagggcggccaggagcccgtggatataaagatcatgagtttcccaaagagcccc
tttccagcccgaagccactttgatgtcagcgggactgtcggtggcctccgtgtgaccagc
cctagtggtcaactcatacctgtgaagaatctgtcggagaatatcgagatcctgctgccc
cggcattcacaaagacacagccagccgaccgtgttgaacctgaccagtcctgaagctttg
tgggtgaacgtgacttcaggggaggcaaccttggggatccagctgcactggagaccagac
attgcactcacgcttagcctgggctatggctaccaccccaacaagagcagctacgatgcc
caaactcacctcgtaccaatggtggctccagatgagctgcccacgtggatcctgagccca
caggacctgcgttttggagaaggggtctactatttgactgtggtccctgagtctgacctg
gagccagcccccggcagggacctcacggttggcatcaccaccttcctgtctcactgtgtg
ttctgggatgaggtccaggagacttgggacgactcaggatgccaggtggggcctcggacc
agcccctaccagacacactgcctctgcaaccacctcactttcttcggaagcacgttcctg
gtgatgtccaatgccatcaacatccaccagactgctgagctctttgccacctttgaggac
aaccctgtggtcgtgaccaccgtgggctgcctgtgtgtggtctacgtgctggtggtgatc
tgggcgaggaggaaggacgctcaggatcaggccaaggtgaaggtcacagtgctggaagac
aatgatccctttgctcagtaccactacctggtgacagtctacacaggacaccgacgaggg
gcagccacgtcctcaaaggtgactgtcaccctgtatggcctggatggagagagagagccc
caccacctggctgatcccgacactccggtttttgagcgaggagcagtggatgccttcctc
ctctccaccctgttccccctgggagaactgcggagcctccggctgtggcatgacaactca
ggggaccggccatcgtggtatgtgagccgggtgctggtctatgacctggtgatggaccgg
aagtggtatttcctgtgcaactcctggctatccatcaatgttggagattgcgtcctcgat
aaggtgtttcctgtggccacggagcaggacagaaaacaattcagccacctgtttttcatg
aagacttccgcgggcttccaggatggacacatctggtattcgatcttcagccgctgcgct
cgcagcagcttcacccgcgtccagagggtgtcctgctgcttctccctgctgctgtgcacc
atgctgaccagcatcatgttctggggggtccccaaggacccagctgagcaaaagatggac
ttgggtaaaattgaattcacctggcaggaggtgatgattggcctggagagctccatcctc
atgttccccatcaacctcctgattgttcagatctttcagaacacccgtccccgggtcgcg
aaggagcagaacactggaaaatgggaccgggggtcccccaacctgactccctccccacag
cccatggaggacggccttctgacacctgaggcagtgaccaaggatgtgtcaagaatcgtc
agctccctcttcaaagctctcaaggtgccatcccccgccttgggctgggactcagtgaac
ttgatggacatcaacagtctcctcgccttggtggaagatgtcatttatccacagaacaca
tcagggcaggtgttctgggaggaagccaaaaagagagaggaccctgtaacactcactttg
gggtcatcagaaatgaaagagaaatcacagtgtcccaagcccaaggcggcacggagtggc
ccctggaaggacagcgcctacaggcagtgtctgtaccttcagctggaacacgtggagcaa
gagctgcggctggtggggccccgaggcttctcccagccccacagccatgcccaggccctc
aggcagctgcagaccctgaagggcggcctgggggtacagccgggcacctgggcccctgca
catgccagcgctcttcaggtgagcaaaccccctcaaggcctgccctggtggtgcatcctg
gtgggctggctcctggtagcggccaccagtggcgtggcggccttcttcaccatgctctac
ggcctgcactacgggagggccagctccctcaggtggctcatctccatggctgtctccttc
gtggagagcatgttcgtcacccagcccctgaaggtgctgggattcgctgctttctttgca
ctggtcttgaagagagtggacgatgaggaggatactgtggccccgctgccaggacatctg
ttgggcccagacccctatgccttgttccgagcacgaagaaacagcagcagggatgtctac
cagccacctctcaccgctgccattgagaagatgaaaaccacccacctcaaggaacagaaa
gcatttgccctcatcagagaaatcctggcatacttgggcttcctgtggatgctactgctc
gtggcctacgggcagagggaccccagcgcctaccacctcaacagacacctccagcacagc
ttcaccaggggcttttcaggtgtgctcggcttccgagagttcttcaagtgggccaacacc
accctcgtgagtaacctgtatggtcaccccccaggctttatcactgatgggaactccaag
ctggttggcagtgcccagattcgtcaagtgagggtccaggaaagctcttgccctcttgcc
cagcagccgcaggcatatctcaacggatgccgtgcaccatattccctggatgctgaagac
atggcagactatggggaaggctggaatgccaccaccctcagtaatggcagtagctttccc
caggcttggcagtaccagagccaggaccaacgtcaagggtatcccatctggggcaaactc
actgtgtaccggggaggaggctacgtggtccccttggggactgatcgccaaagcacgtca
agaattctccgctatctctttgacaacacctggctggacgccctgaccagagctgtgttt
gtggagtccactgtctacaacgccaacgtcaacctgttctgcattgtcacgctgacgcta
gagaccagcgctctgggcaccttttttacgcacgcggccctgcagagcctccgcctgtac
cccttcaccgacggctggcaccccttcgtggtagcggcagagctcatctacttcctcttc
ctcctctactacatggtggtgcagggcaagcgcatgagtaaagagacgtggggctatttc
tgcagcaagtggaaccttctggagctggccatcatcctggccagctggagcgccctggcg
gtgtttgtgaagagggctgtcctggccgaaagggacctccagcgctgccggaaccacagg
gaggaaggcatcagcttcagtgagacagcagcagccgatgccgcccttggctacatcatt
gccttcctggtactcctgtccacagtgaagctttggcatctgctcaggttgaatcccaaa
atgaacatgatcacggcagccctacgccgtgcctggggcgacatttcaggctttatgatt
gtcatccttaccatgctcctggcttactccatcgcgtcaaacttgatatttggttggaaa
ctccgttcctacaaaaccctctttgatgcggcggagacgatggtcagccttcagctggga
atcttcaactacgaggaggtcctggactatagcccagtgcttggctccttcctcattgga
tcctgcattgtttttatgacatttgtggtgctgaacctgtttatctctgtcatcctggtg
gccttcagtgaggagcaaaaatactatcagctgtcggaggaaggggagatcgtagatttg
ctgctgatgaaaatactcagtttcctgggcattaagtctaagagagaggagcctggaagc
agcagggagcagcctgggtctctgtcccagactcgccactctcgaccagcacaagctttg
cccaaggactaa

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (51)   
   KEGG ORTHOLOGY (1)   
   RefGene (43)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (36)   
   RefSeq(nuc) (6)   
   GenBank (15)   
   EMBL (15)   
Protein domain (8)   
   Pfam (8)   
All databases (105)   

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