KEGG   Homo sapiens (human): 1307
Entry
1307              CDS       T01001                                 
Symbol
COL16A1, 447AA, FP1572
Name
(RefSeq) collagen type XVI alpha 1 chain
  KO
K24339  collagen type XVI alpha
Organism
hsa  Homo sapiens (human)
Pathway
hsa04974  Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09150 Organismal Systems
  09154 Digestive system
   04974 Protein digestion and absorption
    1307 (COL16A1)
SSDB
Motif
Pfam: Collagen Laminin_G_2 DUF5330
Other DBs
NCBI-GeneID: 1307
NCBI-ProteinID: NP_001847
OMIM: 120326
HGNC: 2193
Ensembl: ENSG00000084636
UniProt: Q07092
Position
1:complement(31652263..31704017)
AA seq 1604 aa
MWVSWAPGLWLLGLWATFGHGANTGAQCPPSQQEGLKLEHSSSLPANVTGFNLIHRLSLM
KTSAIKKIRNPKGPLILRLGAAPVTQPTRRVFPRGLPEEFALVLTLLLKKHTHQKTWYLF
QVTDANGYPQISLEVNSQERSLELRAQGQDGDFVSCIFPVPQLFDLRWHKLMLSVAGRVA
SVHVDCSSASSQPLGPRRPMRPVGHVFLGLDAEQGKPVSFDLQQVHIYCDPELVLEEGCC
EILPAGCPPETSKARRDTQSNELIEINPQSEGKVYTRCFCLEEPQNSEVDAQLTGRISQK
AERGAKVHQETAADECPPCVHGARDSNVTLAPSGPKGGKGERGLPGPPGSKGEKGARGND
CVRISPDAPLQCAEGPKGEKGESGALGPSGLPGSTGEKGQKGEKGDGGIKGVPGKPGRDG
RPGEICVIGPKGQKGDPGFVGPEGLAGEPGPPGLPGPPGIGLPGTPGDPGGPPGPKGDKG
SSGIPGKEGPGGKPGKPGVKGEKGDPCEVCPTLPEGFQNFVGLPGKPGPKGEPGDPVPAR
GDPGIQGIKGEKGEPCLSCSSVVGAQHLVSSTGASGDVGSPGFGLPGLPGRAGVPGLKGE
KGNFGEAGPAGSPGPPGPVGPAGIKGAKGEPCEPCPALSNLQDGDVRVVALPGPSGEKGE
PGPPGFGLPGKQGKAGERGLKGQKGDAGNPGDPGTPGTTGRPGLSGEPGVQGPAGPKGEK
GDGCTACPSLQGTVTDMAGRPGQPGPKGEQGPEGVGRPGKPGQPGLPGVQGPPGLKGVQG
EPGPPGRGVQGPQGEPGAPGLPGIQGLPGPRGPPGPTGEKGAQGSPGVKGATGPVGPPGA
SVSGPPGRDGQQGQTGLRGTPGEKGPRGEKGEPGECSCPSQGDLIFSGMPGAPGLWMGSS
WQPGPQGPPGIPGPPGPPGVPGLQGVPGNNGLPGQPGLTAELGSLPIEQHLLKSICGDCV
QGQRAHPGYLVEKGEKGDQGIPGVPGLDNCAQCFLSLERPRAEEARGDNSEGDPGCVGSP
GLPGPPGLPGQRGEEGPPGMRGSPGPPGPIGPPGFPGAVGSPGLPGLQGERGLTGLTGDK
GEPGPPGQPGYPGATGPPGLPGIKGERGYTGSAGEKGEPGPPGSEGLPGPPGPAGPRGER
GPQGNSGEKGDQGFQGQPGFPGPPGPPGFPGKVGSPGPPGPQAEKGSEGIRGPSGLPGSP
GPPGPPGIQGPAGLDGLDGKDGKPGLRGDPGPAGPPGLMGPPGFKGKTGHPGLPGPKGDC
GKPGPPGSTGRPGAEGEPGAMGPQGRPGPPGHVGPPGPPGQPGPAGISAVGLKGDRGATG
ERGLAGLPGQPGPPGHPGPPGEPGTDGAAGKEGPPGKQGFYGPPGPKGDPGAAGQKGQAG
EKGRAGMPGGPGKSGSMGPVGPPGPAGERGHPGAPGPSGSPGLPGVPGSMGDMVNYDEIK
RFIRQEIIKMFDERMAYYTSRMQFPMEMAAAPGRPGPPGKDGAPGRPGAPGSPGLPGQIG
REGRQGLPGVRGLPGTKGEKGDIGIGIAGENGLPGPPGPQGPPGYGKMGATGPMGQQGIP
GIPGPPGPMGQPGKAGHCNPSDCFGAMPMEQQYPPMKTMKGPFG
NT seq 4815 nt   +upstreamnt  +downstreamnt
atgtgggtatcctgggctcctggcctgtggctgctcggtctttgggctaccttcggccat
ggggcaaatacaggtgcacaatgcccaccttcacagcaggaaggactcaaattggaacac
agtagtagcctgccagccaacgtgactggcttcaacctcatccaccgactcagcctcatg
aagacgtctgccatcaagaagatccgcaaccccaaggggcctctcatcctgcgcctgggg
gcggcccccgtgacccagcccacgcgaagagtattccctcggggtctcccggaggagttt
gccctggtgctgacactactgctgaagaaacacacccaccagaagacgtggtatctgttt
caagtgaccgatgcaaatgggtatccacagatatccctggaagtcaacagccaagagcgg
agcctggagctcagggcccagggccaggatggcgactttgtgtcctgcatcttcccagtg
ccccagctcttcgacttgcgttggcacaagctgatgctgagtgtggctggacgtgtggcc
tctgtgcacgtggactgcagctcagcctcctcccagcctctggggccccgacgacccatg
aggcctgtgggccatgtatttctaggcttggatgctgagcagggcaagcctgtctcgttt
gaccttcagcaggtgcacatctactgtgacccggagctcgtgctggaggagggctgctgt
gagattttaccagcagggtgccccccagagacctccaaggcccgccgggacacccagagc
aatgagctcattgagatcaatccacagtctgaaggcaaggtctacacccgctgcttctgc
ctggaggagcctcaaaacagcgaggtggatgcccagctgacgggaagaatcagccagaag
gcagaaaggggagcaaaggtccatcaggagacagcagccgatgagtgtccgccctgtgtc
catggtgcccgggacagcaatgtcacacttgctccctctggccccaagggagggaaaggt
gagcggggcctgcctggtccaccaggctccaagggagagaagggagcacggggcaatgac
tgtgttcgaatctccccggatgccccacttcagtgtgcagaaggcccgaagggagagaag
ggggagtcaggagctctgggaccctcaggactcccaggctcaacaggcgagaagggccag
aaaggcgagaagggcgacggaggcatcaagggcgtgccgggaaagccaggccgggacggc
cggccaggagagatctgtgtcattgggcccaaagggcagaagggagaccctggctttgtt
gggcctgaggggctggcaggagagcctgggccccccggcctccctggaccccctgggata
ggactgcctgggaccccgggggatccaggtggcccaccaggccccaagggagacaagggc
agctcggggatcccaggaaaggaaggccctggtgggaaacctgggaagccaggtgtgaag
ggagagaagggtgacccctgtgaagtgtgcccaacactgcctgaagggttccagaacttt
gttggacttcctggaaagccagggcccaaaggggagcctggtgatcctgtaccagccagg
ggagaccctggcatccaaggcatcaaaggagagaagggggagccctgcttgtcctgcagc
tcggttgtaggggcccagcatcttgtgtcctccacaggggccagtggagatgtgggttcc
cctggctttggtctgcctggccttccgggtagagctggggttccagggctgaaaggagag
aagggtaacttcggggaggcagggccagctggcagtccagggccaccaggaccagtgggg
ccagcaggcatcaaaggggcgaagggggagccctgtgagccgtgcccagccctgtccaac
cttcaggatggggatgtccgtgtggtggccttgcctggcccatccggagagaagggggaa
cctgggcctccaggctttggcttgccaggaaaacagggcaaggctggagagcgtggactg
aaggggcagaagggtgatgctgggaatcctggagaccctggaacgccgggcaccacaggg
cggccaggactgtcaggagagcctggagttcagggccccgcggggccaaaaggagaaaag
ggtgatggctgcactgcctgccccagcctgcaggggacagtgacagacatggcaggacgg
cctgggcagcccggccccaaaggagagcagggccccgaaggcgtgggccgacctggtaaa
cccggccaacccggtctaccaggagttcaagggcccccaggactgaagggcgtgcaggga
gagccagggcctccaggaaggggagtccagggaccccagggggagcctggagccccgggt
ttgcctggcattcagggacttccgggacctcggggaccacctggccccactggagagaag
ggtgcccagggatctccaggggtgaaaggagccaccggacctgtgggacctcctggggcc
agtgtctctgggcctccgggccgtgatgggcagcaaggacagacgggactcagaggaaca
ccaggtgaaaaaggaccacgaggagagaagggtgagccaggggagtgctcctgcccctct
caaggagacctcatcttctctggcatgccgggtgctccgggactttggatgggcagctcc
tggcagccgggcccgcagggtccaccaggtattcccggaccaccaggcccccctggagta
cctgggctgcagggagtgcctggaaacaacggtttgccaggacagcctgggctcactgca
gaactgggatccttaccaattgaacagcacctccttaagagtatctgcggggactgtgtc
caggggcagagggcccacccagggtacctcgtggagaagggagagaagggagaccagggc
atccctggtgtgccaggcctcgacaactgcgcccagtgctttttgtcactggagcgccca
agagccgaggaggcccggggtgacaacagtgagggagatcctggctgtgttgggagccca
ggcctacctggtcctccgggattgccaggccagagaggagaagagggtccgcctggcatg
aggggctccccgggtcctccaggccctatcggccccccaggttttcctggtgctgttggc
tcccccggattgcctggccttcaaggagagcgaggtctcacgggcctgactggagacaag
ggggagccgggtcctccagggcaaccaggttacccaggtgccacgggccccccaggactg
cctggcatcaagggggagcgtggctacaccgggtcagcgggagagaaaggagagccgggc
cccccaggatctgaaggcctcccaggccccccaggcccagcgggtcccagaggagagcga
ggaccccaaggtaactccggtgagaagggcgaccagggatttcaaggccagccaggcttt
ccgggcccaccgggtccccctggattcccaggcaaagttggatcacctggcccacctggc
cctcaagcagagaagggcagcgaagggattcgaggcccatcaggcctgcctggctcccct
gggccaccgggacctcctgggattcagggccccgccggtctggatggtttggatgggaag
gacggcaagcctggcttgaggggggaccctggtcctgctggcccccctggactcatggga
ccaccgggctttaaggggaaaacaggacatcctggcctcccaggacctaagggtgactgt
ggcaaaccaggtccccctggcagcactggccggcctggcgcagagggtgaacctggtgcc
atgggaccccagggaagacccggtcccccgggacacgttgggccaccagggcctccaggc
cagccaggaccagctgggatctctgcagtgggtctgaaaggagaccgaggagccaccgga
gaaaggggccttgcaggcctcccaggccagcccggcccccctggacaccctggcccccca
ggcgaacctggtacggatggtgcagctggcaaagagggaccccctggaaagcagggattc
tatggacctcctggtcccaagggtgatccaggagctgcaggacagaagggccaggcagga
gagaaggggagagccggcatgcctggtggacctggcaagagtggttccatggggcctgtt
gggccaccgggccctgcaggagagagaggccaccctggagctccggggccttcggggagc
cctggcttgcctggtgtgcctggctccatgggagacatggtgaattatgatgaaatcaag
aggttcatcagacaagagatcattaaaatgtttgatgagagaatggcttactacacctcc
aggatgcagttccccatggagatggcggcagctccgggacgaccagggcctccagggaag
gatggtgctccgggcaggccaggtgctccagggtcacctgggctccctggtcagattggc
agagaaggacggcagggcttgccaggagtaagaggattgcctggtaccaaaggtgaaaaa
ggggacattggtattggcattgcaggagaaaatggtcttcccggccccccaggtcctcaa
ggtcctccaggctatggcaagatgggtgcaacaggaccaatgggccagcaaggcatccct
ggcatccctgggcccccgggtcccatgggccagccaggcaaggctggccactgtaatccc
tctgactgctttggggccatgccgatggagcagcagtacccacccatgaaaaccatgaag
gggccttttggctga

  All links  
Ontology (1)   
   KEGG BRITE (1)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (38)   
   KEGG ORTHOLOGY (1)   
   RefGene (30)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (37)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (35)   
DNA sequence (53)   
   RefSeq(nuc) (37)   
   GenBank (8)   
   EMBL (8)   
Protein domain (3)   
   Pfam (3)   
All databases (135)   

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