KEGG   Homo sapiens (human): 142940
Entry
142940            CDS       T01001                                 
Symbol
TRUB1, PUS4
Name
(RefSeq) TruB pseudouridine synthase family member 1
  KO
K03177  tRNA pseudouridine55 synthase [EC:5.4.99.25]
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:hsa03016]
    142940 (TRUB1)
Enzymes [BR:hsa01000]
 5. Isomerases
  5.4  Intramolecular transferases
   5.4.99  Transferring other groups
    5.4.99.25  tRNA pseudouridine55 synthase
     142940 (TRUB1)
Transfer RNA biogenesis [BR:hsa03016]
 Eukaryotic type
  tRNA modification factors
   Psudouridine synthases
    142940 (TRUB1)
 Prokaryotic type
    142940 (TRUB1)
SSDB
Motif
Pfam: TruB_N TruB_C_2 Pus10_C
Other DBs
NCBI-GeneID: 142940
NCBI-ProteinID: NP_631908
OMIM: 610726
HGNC: 16060
Ensembl: ENSG00000165832
UniProt: Q8WWH5
Position
10:114938195..114977676
AA seq 349 aa
MAASEAAVVSSPSLKTDTSPVLETAGTVAAMAATPSARAAAAVVAAAARTGSEARVSKAA
LATKLLSLSGVFAVHKPKGPTSAELLNRLKEKLLAEAGMPSPEWTKRKKQTLKIGHGGTL
DSAARGVLVVGIGSGTKMLTSMLSGSKRYTAIGELGKATDTLDSTGRVTEEKPYDKITQE
DIEGILQKFTGNIMQVPPLYSALKKDGQRLSTLMKRGEVVEAKPARPVTVYSISLQKFQP
PFFTLDVECGGGFYIRSLVSDIGKELSSCANVLELTRTKQGPFTLEEHALPEDKWTIDDI
AQSLEHCSSLFPAELALKKSKPESNEQVLSCEYITLNEPKREDDVIKTC
NT seq 1050 nt   +upstreamnt  +downstreamnt
atggccgcttctgaggcggcggtggtgtcttcgccgtctttgaaaacagacacatcccct
gtccttgaaactgcaggaacggtcgcagcaatggctgcgaccccgtcagcaagggctgca
gccgcggtggttgcggccgcggccaggaccggatccgaagccagggtctccaaggccgct
ttggctaccaagctgctgtccttgagcggcgtgttcgccgtgcacaagcccaaagggccc
acttcagccgagctgctgaatcggttgaaggagaagctgctggcagaagctggaatgcct
tctccagaatggaccaagaggaaaaagcagactttgaaaattgggcatggagggactcta
gacagcgcagcccgaggagttctggttgttggaattggaagcggaacaaaaatgttgacc
agtatgttgtcagggtccaagagatatactgccattggagaactggggaaagctactgat
acactagattctacggggagggtaacagaagaaaaaccttacgataaaataacacaagaa
gatattgaaggcattctacagaaatttactggaaatataatgcaagtgccccccctctat
tctgcattaaagaaagatggacaaagactttcgactttgatgaagagaggtgaagtcgta
gaagcaaaacctgccaggccagtgactgtatacagtatctcccttcaaaaattccagcca
ccatttttcacattagatgttgaatgtggaggaggtttttatatcagaagcttggtcagt
gacattggaaaagaactatcttcctgtgccaatgtgctagagctgacccgaaccaaacag
ggaccatttacgctagaagaacatgcccttcctgaagacaaatggacaattgatgacatt
gcacagtctcttgagcattgctcatctcttttcccagcagagttggcacttaaaaaatca
aaacctgagtctaatgaacaggttttgagctgtgaatatataactctaaatgagccaaag
agagaagatgatgtaattaagacgtgttga

  All links  
Ontology (3)   
   KEGG BRITE (3)   
Disease (1)   
   OMIM (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (21)   
   RefSeq(nuc) (1)   
   GenBank (10)   
   EMBL (10)   
Protein domain (3)   
   Pfam (3)   
All databases (43)   

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