KEGG   Homo sapiens (human): 1477
Entry
1477              CDS       T01001                                 
Symbol
CSTF1, CstF-50, CstFp50
Name
(RefSeq) cleavage stimulation factor subunit 1
  KO
K14406  cleavage stimulation factor subunit 1
Organism
hsa  Homo sapiens (human)
Pathway
hsa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    1477 (CSTF1)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    1477 (CSTF1)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     1477 (CSTF1)
SSDB
Motif
Pfam: WD40 CSTF1_dimer ANAPC4_WD40 NBCH_WD40 Ge1_WD40 Frtz
Other DBs
NCBI-GeneID: 1477
NCBI-ProteinID: NP_001028693
OMIM: 600369
HGNC: 2483
Ensembl: ENSG00000101138
UniProt: Q05048
Structure
Position
20:56392379..56406362
AA seq 431 aa
MYRTKVGLKDRQQLYKLIISQLLYDGYISIANGLINEIKPQSVCAPSEQLLHLIKLGMEN
DDTAVQYAIGRSDTVAPGTGIDLEFDADVQTMSPEASEYETCYVTSHKGPCRVATYSRDG
QLIATGSADASIKILDTERMLAKSAMPIEVMMNETAQQNMENHPVIRTLYDHVDEVTCLA
FHPTEQILASGSRDYTLKLFDYSKPSAKRAFKYIQEAEMLRSISFHPSGDFILVGTQHPT
LRLYDINTFQCFVSCNPQDQHTDAICSVNYNSSANMYVTGSKDGCIKLWDGVSNRCITTF
EKAHDGAEVCSAIFSKNSKYILSSGKDSVAKLWEISTGRTLVRYTGAGLSGRQVHRTQAV
FNHTEDYVLLPDERTISLCCWDSRTAERRNLLSLGHNNIVRCIVHSPTNPGFMTCSDDFR
ARFWYRRSTTD
NT seq 1296 nt   +upstreamnt  +downstreamnt
atgtacagaaccaaagtgggcttgaaggaccgccagcagctctacaagctgatcattagc
cagctgctatatgacggctacatcagcatcgccaatggcctcatcaatgaaatcaagcct
cagtctgtgtgtgcaccctcggagcagctcctgcatctcatcaaactcggaatggaaaac
gatgacaccgcagttcagtatgcaattggtcgttcagatactgttgcccctggcacaggg
attgacctggaatttgatgcagatgttcagactatgtccccagaggcttctgagtacgaa
acatgctatgtcacatcacataaaggaccatgccgtgtagctacctatagtagagatgga
cagttaatagctactgggtctgctgatgcttcgataaagatacttgacacagagaggatg
ttggccaaaagtgccatgccaatagaggtcatgatgaatgagaccgcacaacaaaatatg
gaaaaccacccagtgattcgaactctttatgaccatgtggatgaagtcacgtgccttgct
ttccacccaacagaacagatcctggcttctggttcaagggattatactcttaaattattt
gattattccaaaccatcagcaaaaagagccttcaaatacattcaggaagctgaaatgtta
cgttccatctcttttcatccttctggagactttatacttgtcggaactcagcatcctact
cttcgcctttatgatatcaacacctttcaatgttttgtctcttgcaatcctcaagatcaa
cacaccgatgctatatgttccgttaattacaattctagtgccaatatgtacgtaactgga
agcaaggacggctgcatcaaattatgggatggtgtttcaaatcgatgcatcacaactttt
gagaaagcacatgacggtgctgaagtttgttctgccattttttccaaaaattctaaatac
attctctcaagtggaaaagactctgtagctaaactttgggaaatatcaacgggacgaaca
ctggtcagatacacgggcgcgggtttaagtggacgccaggtgcaccggacacaggctgtg
tttaaccacaccgaggactatgtgttgctgcccgacgagaggacgatcagtctttgctgc
tgggactcgaggacagccgagcggagaaacctgctgtcgttggggcacaacaatattgta
cgctgcatagtgcactcccccaccaaccccgggttcatgacgtgcagcgatgacttcaga
gcgcggttttggtaccggagatcgaccactgactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (22)   
   KEGG ORTHOLOGY (1)   
   RefGene (12)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (7)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (5)   
DNA sequence (33)   
   RefSeq(nuc) (5)   
   GenBank (14)   
   EMBL (14)   
3D Structure (1)   
   PDB (1)   
Protein domain (6)   
   Pfam (6)   
All databases (74)   

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