KEGG   Homo sapiens (human): 1479
Entry
1479              CDS       T01001                                 
Symbol
CSTF3, CSTF-77
Name
(RefSeq) cleavage stimulation factor subunit 3
  KO
K14408  cleavage stimulation factor subunit 3
Organism
hsa  Homo sapiens (human)
Pathway
hsa03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    1479 (CSTF3)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    1479 (CSTF3)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     1479 (CSTF3)
SSDB
Motif
Pfam: Suf TPR_14 NRDE-2 TPR_19 TPR_6 TPR_16
Other DBs
NCBI-GeneID: 1479
NCBI-ProteinID: NP_001317
OMIM: 600367
HGNC: 2485
Ensembl: ENSG00000176102
UniProt: Q12996
Structure
Position
11:complement(33084584..33161480)
AA seq 717 aa
MSGDGATEQAAEYVPEKVKKAEKKLEENPYDLDAWSILIREAQNQPIDKARKTYERLVAQ
FPSSGRFWKLYIEAEIKAKNYDKVEKLFQRCLMKVLHIDLWKCYLSYVRETKGKLPSYKE
KMAQAYDFALDKIGMEIMSYQIWVDYINFLKGVEAVGSYAENQRITAVRRVYQRGCVNPM
INIEQLWRDYNKYEEGINIHLAKKMIEDRSRDYMNARRVAKEYETVMKGLDRNAPSVPPQ
NTPQEAQQVDMWKKYIQWEKSNPLRTEDQTLITKRVMFAYEQCLLVLGHHPDIWYEAAQY
LEQSSKLLAEKGDMNNAKLFSDEAANIYERAISTLLKKNMLLYFAYADYEESRMKYEKVH
SIYNRLLAIEDIDPTLVYIQYMKFARRAEGIKSGRMIFKKAREDTRTRHHVYVTAALMEY
YCSKDKSVAFKIFELGLKKYGDIPEYVLAYIDYLSHLNEDNNTRVLFERVLTSGSLPPEK
SGEIWARFLAFESNIGDLASILKVEKRRFTAFKEEYEGKETALLVDRYKFMDLYPCSASE
LKALGYKDVSRAKLAAIIPDPVVAPSIVPVLKDEVDRKPEYPKPDTQQMIPFQPRHLAPP
GLHPVPGGVFPVPPAAVVLMKLLPPPICFQGPFVQVDELMEIFRRCKIPNTVEEAVRIIT
GGAPELAVEGNGPVESNAVLTKAVKRPNEDSDEDEEKGAVVPPVHDIYRARQQKRIR
NT seq 2154 nt   +upstreamnt  +downstreamnt
atgtcaggagacggagccacggagcaggcagctgagtatgtcccagagaaggtgaagaaa
gcggaaaagaaattagaagagaatccatatgaccttgatgcttggagcattctcattcga
gaggcacagaatcaacctatagacaaagcacggaagacttatgaacgccttgttgcccag
ttccccagttctggcagattctggaaactgtacattgaagcagagattaaagctaaaaat
tatgacaaggttgaaaagctatttcagagatgccttatgaaggttttgcacattgattta
tggaagtgttatctttcatatgtccgagaaaccaagggtaaactaccaagttacaaagaa
aaaatggctcaagcatatgactttgcactggataaaattggaatggaaattatgtcctat
cagatttgggtggattacatcaatttcctaaaaggcgtggaagctgtaggatcttatgca
gaaaatcaaagaataacagctgtccgaagagtttatcaacgaggttgtgttaatccgatg
atcaacattgaacagctctggagagactataacaagtatgaagagggtatcaatattcat
ttagctaaaaaaatgattgaagatcggagtagagattatatgaatgctagacgtgtagca
aaggaatatgagacagtaatgaaaggcttggaccgtaatgctccctcggtgcctcctcag
aatactcctcaagaagctcaacaagtagatatgtggaagaaatatatacagtgggaaaag
agcaaccctcttcgtacagaggatcagacccttataacaaaaagagttatgtttgcttat
gaacagtgcctgcttgtgctgggccatcaccctgatatttggtatgaagctgcccagtat
cttgagcagtcaagtaaactgctcgcagaaaagggagatatgaataatgccaaattattt
agtgatgaagctgctaatatatatgaaagagccataagcactttattgaagaagaatatg
cttctttattttgcatatgcagattatgaagagagtcgcatgaagtatgaaaaggttcac
agtatatataacagacttctggcaattgaggatattgaccctaccttggtatatatccaa
tatatgaaatttgcacggagagcagaaggcatcaaatctggaagaatgatatttaaaaaa
gcaagagaagataccagaacccgccaccatgtctatgttactgcagcactcatggaatat
tactgtagtaaggacaaatctgttgcctttaagatttttgagctggggctaaaaaaatat
ggagacattccagagtatgtcctggcctatattgactatctttctcacctcaatgaggac
aataatacccgagttttgtttgaacgagttttaacatctggaagccttcctcctgagaag
tctggagaaatctgggcccgatttctagcatttgaaagtaatattggtgatctagctagt
atactcaaagtggagaaaagacggtttacagcattcaaagaagagtatgaagggaaagaa
acggctttactagtagatagatacaagttcatggatttatatccttgctctgcaagtgaa
ttaaaagcacttggttataaggatgtctcccgtgctaagctagcagctataattccggac
ccagttgtagctccttctatagtgcctgttctgaaagatgaagtggatagaaaaccagaa
taccctaaaccagacactcagcagatgattccatttcagccacgacatttagcacctcca
ggtttacaccctgtacctggtggagtgttcccagtccctcctgcagctgttgttttaatg
aaacttctccctcctcctatctgtttccagggtccttttgtacaagtggatgaactgatg
gaaattttccgaagatgcaagataccaaatactgttgaggaagctgtgaggatcattact
ggtggggccccagagctagctgtagaaggcaacggccccgtggaaagtaatgcagtactc
accaaggccgtcaaaaggcccaacgaggattcagatgaagatgaagaaaagggagccgtt
gtcccccctgttcatgacatttacagagcacggcagcagaagcggattcggtag

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (20)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (8)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (21)   
   RefSeq(nuc) (3)   
   GenBank (9)   
   EMBL (9)   
3D Structure (3)   
   PDB (3)   
Protein domain (6)   
   Pfam (6)   
All databases (74)   

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