KEGG   Homo sapiens (human): 158038
Entry
158038            CDS       T01001                                 
Symbol
LINGO2, LERN3, LRRN6C
Name
(RefSeq) leucine rich repeat and Ig domain containing 2
  KO
K23533  leucine-rich repeat and immunoglobulin-like domain-containing nogo receptor-interacting protein
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:hsa04131]
    158038 (LINGO2)
Membrane trafficking [BR:hsa04131]
 Endocytosis
  Lipid raft mediated endocytosis
   RhoA-dependent endocytosis
    158038 (LINGO2)
SSDB
Motif
Pfam: LRR_8 LRR_5 LRR_4 I-set Ig_3 LRR_1 ig Ig_2 LRRNT V-set LRR_9 C2-set_2 Ig_6 Ig_C17orf99 Sp38
Other DBs
NCBI-GeneID: 158038
NCBI-ProteinID: NP_001245211
OMIM: 609793
HGNC: 21207
Ensembl: ENSG00000174482
UniProt: Q7L985
Position
9:complement(27937617..29213601)
AA seq 606 aa
MLHTAISCWQPFLGLAVVLIFMGSTIGCPARCECSAQNKSVSCHRRRLIAIPEGIPIETK
ILDLSKNRLKSVNPEEFISYPLLEEIDLSDNIIANVEPGAFNNLFNLRSLRLKGNRLKLV
PLGVFTGLSNLTKLDISENKIVILLDYMFQDLHNLKSLEVGDNDLVYISHRAFSGLLSLE
QLTLEKCNLTAVPTEALSHLRSLISLHLKHLNINNMPVYAFKRLFHLKHLEIDYWPLLDM
MPANSLYGLNLTSLSVTNTNLSTVPFLAFKHLVYLTHLNLSYNPISTIEAGMFSDLIRLQ
ELHIVGAQLRTIEPHSFQGLRFLRVLNVSQNLLETLEENVFSSPRALEVLSINNNPLACD
CRLLWILQRQPTLQFGGQQPMCAGPDTIRERSFKDFHSTALSFYFTCKKPKIREKKLQHL
LVDEGQTVQLECSADGDPQPVISWVTPRRRFITTKSNGRATVLGDGTLEIRFAQDQDSGM
YVCIASNAAGNDTFTASLTVKGFASDRFLYANRTPMYMTDSNDTISNGTNANTFSLDLKT
ILVSTAMGCFTFLGVVLFCFLLLFVWSRGKGKHKNSIDLEYVPRKNNGAVVEGEVAGPRR
FNMKMI
NT seq 1821 nt   +upstreamnt  +downstreamnt
atgcttcacacggccatatcatgctggcagccattcctgggtctggctgtggtgttaatc
ttcatgggatccaccattggctgccccgctcgctgtgagtgctctgcccagaacaaatct
gttagctgtcacagaaggcgattgatcgccatcccagagggcattcccatcgaaaccaaa
atcttggacctcagtaaaaacaggctaaaaagcgtcaaccctgaagaattcatatcatat
cctctgctggaagagatagacttgagtgacaacatcattgccaatgtggaaccaggagca
ttcaacaatctctttaacctgcgttccctccgcctaaaaggcaatcgtctaaagctggtc
cctttgggagtattcacggggctgtccaatctcactaagcttgacattagtgagaataag
attgtcattttactagactacatgttccaagatctacataacctgaagtctctagaagtg
ggggacaatgatttggtttatatatcacacagggcattcagtgggcttcttagcttggag
cagctcaccctggagaaatgcaacttaacagcagtaccaacagaagccctctcccacctc
cgcagcctcatcagcctgcatctgaagcatctcaatatcaacaatatgcctgtgtatgcc
tttaaaagattgttccacctgaaacacctagagattgactattggcctttactggatatg
atgcctgccaatagcctctacggtctcaacctcacatccctttcagtcaccaacaccaat
ctgtctactgtacccttccttgcctttaaacacctggtatacctgactcaccttaacctc
tcctacaatcccatcagcactattgaagcaggcatgttctctgacctgatccgccttcag
gagcttcatatagtgggggcccagcttcgcaccattgagcctcactccttccaagggctc
cgcttcctacgcgtgctcaatgtgtctcagaacctgctggaaactttggaagagaatgtc
ttctcctcccctagggctctggaggtcttgagcattaacaacaaccctctggcctgtgac
tgccgccttctctggatcttgcagcgacagcccaccctgcagtttggtggccagcaacct
atgtgtgctggcccagacaccatccgtgagaggtctttcaaggatttccatagcactgcc
ctttctttttactttacctgcaaaaaacccaaaatccgtgaaaagaagttgcagcatctg
ctagtagatgaagggcagacagtccagctagaatgcagtgcagatggagacccgcagcct
gtgatttcctgggtgacaccccgaaggcgtttcatcaccaccaagtccaatggaagagcc
accgtgttgggtgatggcaccttggaaatccgctttgcccaggatcaagacagcgggatg
tatgtttgcatcgctagcaatgctgctgggaatgataccttcacagcctccttaactgtg
aaaggattcgcttcagatcgttttctttatgcgaacaggacccctatgtacatgaccgac
tccaatgacaccatttccaatggcaccaatgccaatactttttccctggaccttaaaaca
atactggtgtctacagctatgggctgcttcacattcctgggagtggttttattttgtttt
cttctcctttttgtgtggagccgagggaaaggcaagcacaaaaacagcattgaccttgag
tatgtgcccagaaaaaacaatggtgctgttgtggaaggggaggtagctggacccaggagg
ttcaacatgaaaatgatttga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (13)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (44)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (42)   
DNA sequence (62)   
   RefSeq(nuc) (44)   
   GenBank (9)   
   EMBL (9)   
Protein domain (15)   
   Pfam (15)   
All databases (138)   

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