KEGG   Homo sapiens (human): 168400
Entry
168400            CDS       T01001                                 
Symbol
DDX53, CAGE, CT26
Name
(RefSeq) DEAD-box helicase 53
  KO
K21869  ATP-dependent RNA helicase DDX53 [EC:5.6.2.7]
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03036 Chromosome and associated proteins [BR:hsa03036]
    168400 (DDX53)
Enzymes [BR:hsa01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.7  DEAD-box RNA helicase
     168400 (DDX53)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Histone modification proteins
   HDAC complexes
    Other HDAC associated proteins
     168400 (DDX53)
SSDB
Motif
Pfam: DEAD Helicase_C KH_1 ResIII MOEP19 KH_2 CinA_KH
Other DBs
NCBI-GeneID: 168400
NCBI-ProteinID: NP_874358
OMIM: 301079
HGNC: 20083
Ensembl: ENSG00000184735
UniProt: Q86TM3
Structure
Position
X:22999960..23003589
AA seq 631 aa
MSHWAPEWKRAEANPRDLGASWDVRGSRGSGWSGPFGHQGPRAAGSREPPLCFKIKNNMV
GVVIGYSGSKIKDLQHSTNTKIQIINGESEAKVRIFGNREMKAKAKAAIETLIRKQESYN
SESSVDNAASQTPIGRNLGRNDIVGEAEPLSNWDRIRAAVVECEKRKWADLPPVKKNFYI
ESKATSCMSEMQVINWRKENFNITCDDLKSGEKRLIPKPTCRFKDAFQQYPDLLKSIIRV
GIVKPTPIQSQAWPIILQGIDLIVVAQTGTGKTLSYLMPGFIHLDSQPISREQRNGPGML
VLTPTRELALHVEAECSKYSYKGLKSICIYGGRNRNGQIEDISKGVDIIIATPGRLNDLQ
MNNSVNLRSITYLVIDEADKMLDMEFEPQIRKILLDVRPDRQTVMTSATWPDTVRQLALS
YLKDPMIVYVGNLNLVAVNTVKQNIIVTTEKEKRALTQEFVENMSPNDKVIMFVSQKHIA
DDLSSDFNIQGISAESLHGNSEQSDQERAVEDFKSGNIKILITTDIVSRGLDLNDVTHVY
NYDFPRNIDVYVHRVGYIGRTGKTGTSVTLITQRDSKMAGELIKILDRANQSVPEDLVVM
AEQYKLNQQKRHRETRSRKPGQRRKEFYFLS
NT seq 1896 nt   +upstreamnt  +downstreamnt
atgtcccactgggccccagagtggaagagggcggaggctaatccaagagaccttggggcc
agctgggatgtcaggggcagcagaggcagtggctggagtggccccttcggccatcaggga
ccgagagcagcaggctcccgtgaaccaccactctgctttaaaataaagaacaatatggtt
ggtgtggtcattggttacagtggatcaaaaataaaagatctacaacattcgacaaacact
aaaatacagatcataaacggggaatctgaagcaaaagtcagaatttttggcaatagggaa
atgaaagcaaaggccaaagcggctatagaaacacttattagaaaacaagaaagctacaac
tcagaatccagtgtggataatgctgcatcccaaacccctattggaagaaatctaggcaga
aatgacattgttggagaagctgagccattgtcaaattgggatcgcattagggcagcagtc
gtggagtgcgaaaagagaaaatgggcagatctaccaccagttaagaaaaacttttacata
gaatccaaagcaacaagctgcatgtctgaaatgcaggtgattaactggagaaaggaaaat
ttcaacataacgtgtgatgacttgaaaagtggtgaaaagcgtctcattccaaaaccaact
tgcaggtttaaagacgcttttcagcaataccctgatcttctgaaaagcataataagggta
gggattgtaaagccaacgccaattcagtcacaggcatggccaattattctacaaggaata
gatcttatagtagttgcacaaaccggaacagggaaaacattgtcctatctaatgcctggg
tttattcatcttgattctcaaccaatatctagagagcaaaggaatgggcctgggatgcta
gtccttacacccactagagagttggctcttcacgtggaagctgaatgttcaaagtattca
tataaaggtctcaaaagcatttgcatatatggtggtagaaacagaaatggacaaatagaa
gacattagcaaaggtgtagatatcattattgcaactcctgggaggctgaatgacctacaa
atgaataactctgtcaacctaagaagcataacctacttggttatagatgaggcagataaa
atgctggatatggaatttgaaccccagataaggaagattttattagatgtgcgcccagac
cgacagactgttatgacaagtgcaacttggccagatactgtacgtcaactagcactttct
tatttgaaagatcctatgattgtttatgttggtaatctgaatctagtggctgtaaataca
gtgaagcaaaatataattgttaccacagaaaaagaaaaacgagctctcacccaagaattc
gtagagaacatgtcacccaacgacaaagtcatcatgtttgtcagccaaaaacatattgct
gatgacttgtcaagcgacttcaatatccaaggcatatctgcagaatcattacatggcaac
agtgaacagagtgatcaagagcgagcagtagaggactttaaaagcggaaacataaagata
ctgattacaactgatatagtatcccgaggtcttgatcttaatgatgtcacacatgtatat
aattatgatttcccaaggaatattgacgtatatgtacacagagtagggtacattggacgg
acaggaaagactggcacatcagttaccctcatcactcagagagattcgaaaatggccggt
gaattgattaaaattctggacagagcaaatcagagtgttccggaagatcttgtagtaatg
gctgagcaatacaagttaaatcaacaaaagaggcacagagaaacacgatcaagaaaacct
ggacaaagacgcaaggagttttattttttaagttga

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Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (15)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (7)   
   RefSeq(nuc) (1)   
   GenBank (3)   
   EMBL (3)   
3D Structure (2)   
   PDB (2)   
Protein domain (7)   
   Pfam (7)   
All databases (39)   

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