KEGG   Homo sapiens (human): 196528
Entry
196528            CDS       T01001                                 
Symbol
ARID2, BAF200, CSS6, SMARCF3, ZIPZAP, p200
Name
(RefSeq) AT-rich interaction domain 2
  KO
K11765  AT-rich interactive domain-containing protein 2
Organism
hsa  Homo sapiens (human)
Pathway
hsa03082  ATP-dependent chromatin remodeling
hsa05225  Hepatocellular carcinoma
Disease
H00048  Hepatocellular carcinoma
H01403  Coffin-Siris syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    196528 (ARID2)
 09160 Human Diseases
  09162 Cancer: specific types
   05225 Hepatocellular carcinoma
    196528 (ARID2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:hsa03000]
    196528 (ARID2)
   03021 Transcription machinery [BR:hsa03021]
    196528 (ARID2)
   03036 Chromosome and associated proteins [BR:hsa03036]
    196528 (ARID2)
Transcription factors [BR:hsa03000]
 Eukaryotic type
  Helix-turn-helix
   ARID
    196528 (ARID2)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     196528 (ARID2)
Chromosome and associated proteins [BR:hsa03036]
 Eukaryotic type
  Chromatin remodeling factors
   PBAF complex
    196528 (ARID2)
SSDB
Motif
Pfam: ARID RFX_DNA_binding
Other DBs
NCBI-GeneID: 196528
NCBI-ProteinID: NP_689854
OMIM: 609539
HGNC: 18037
Ensembl: ENSG00000189079
UniProt: Q68CP9
Structure
Position
12:45729706..45908037
AA seq 1835 aa
MANSTGKAPPDERRKGLAFLDELRQFHHSRGSPFKKIPAVGGKELDLHGLYTRVTTLGGF
AKVSEKNQWGEIVEEFNFPRSCSNAAFALKQYYLRYLEKYEKVHHFGEDDDEVPPGNPKP
QLPIGAIPSSYNYQQHSVSDYLRQSYGLSMDFNSPNDYNKLVLSLLSGLPNEVDFAINVC
TLLSNESKHVMQLEKDPKIITLLLANAGVFDDTLGSFSTVFGEEWKEKTDRDFVKFWKDI
VDDNEVRDLISDRNKSHEGTSGEWIWESLFHPPRKLGINDIEGQRVLQIAVILRNLSFEE
GNVKLLAANRTCLRFLLLSAHSHFISLRQLGLDTLGNIAAELLLDPVDFKTTHLMFHTVT
KCLMSRDRFLKMRGMEILGNLCKAEDNGVLICEYVDQDSYREIICHLTLPDVLLVISTLE
VLYMLTEMGDVACTKIAKVEKSIDMLVCLVSMDIQMFGPDALAAVKLIEHPSSSHQMLSE
IRPQAIEQVQTQTHVASAPASRAVVAQHVAPPPGIVEIDSEKFACQWLNAHFEVNPDCSV
SRAEMYSEYLSTCSKLARGGILTSTGFYKCLRTVFPNHTVKRVEDSSSNGQAHIHVVGVK
RRAIPLPIQMYYQQQPVSTSVVRVDSVPDVSPAPSPAGIPHGSQTIGNHFQRTPVANQSS
NLTATQMSFPVQGVHTVAQTVSRIPQNPSPHTHQQQNAPVTVIQSKAPIPCEVVKATVIQ
NSIPQTGVPVSIAVGGGPPQSSVVQNHSTGPQPVTVVNSQTLLHHPSVIPQQSPLHTVVP
GQIPSGTPVTVIQQAVPQSHMFGRVQNIPACTSTVSQGQQLITTSPQPVQTSSQQTSAGS
QSQDTVIIAPPQYVTTSASNIVSATSVQNFQVATGQMVTIAGVPSPQASRVGFQNIAPKP
LPSQQVSSTVVQQPIQQPQQPTQQSVVIVSQPAQQGQTYAPAIHQIVLANPAALPAGQTV
QLTGQPNITPSSSPSPVPATNNQVPTAMSSSSTPQSQGPPPTVSQMLSVKRQQQQQHSPA
PPPQQVQVQVQQPQQVQMQVQPQQSNAGVGQPASGESSLIKQLLLPKRGPSTPGGKLILP
APQIPPPNNARAPSPQVVYQVASNQAAGFGVQGQTPAQQLLVGQQNVQLVPSAMPPSGGV
QTVPISNLQILPGPLISNSPATIFQGTSGNQVTITVVPNTSFAPATVSQGNATQLIAPAG
ITMSGTQTGVGLPVQTLPATQASPAGQSSCTTATPPFKGDKIICQKEEEAKEATGLHVHE
RKIEVMENPSCRRGATNTSNGDTKENEMHVGSLLNGRKYSDSSLPPSNSGKIQSETNQCS
LISNGPSLELGENGASGKQNSEQIDMQDIKSDLRKPLVNGICDFDKGDGSHLSKNIPNHK
TSNHVGNGEISPMEPQGTLDITQQDTAKGDQLERISNGPVLTLGGSSVSSIQEASNAATQ
QFSGTDLLNGPLASSLNSDVPQQRPSVVVSPHSTTSVIQGHQIIAVPDSGSKVSHSPALS
SDVRSTNGTAECKTVKRPAEDTDRETVAGIPNKVGVRIVTISDPNNAGCSATMVAVPAGA
DPSTVAKVAIESAVQQKQQHPPTYVQNVVPQNTPMPPSPAVQVQGQPNSSQPSPFSGSSQ
PGDPMRKPGQNFMCLWQSCKKWFQTPSQVFYHAATEHGGKDVYPGQCLWEGCEPFQRQRF
SFITHLQDKHCSKDALLAGLKQDEPGQAGSQKSSTKQPTVGGTSSTPRAQKAIVNHPSAA
LMALRRGSRNLVFRDFTDEKEGPITKHIRLTAALILKNIGKYSECGRRLLKRHENNLSVL
AISNMEASSTLAKCLYELNFTVQSKEQEKDSEMLQ
NT seq 5508 nt   +upstreamnt  +downstreamnt
atggcaaactcgacggggaaggcgcctccggacgagcggagaaagggactcgctttcctg
gacgagctgcggcagttccaccacagcagagggtcgccttttaaaaaaatccctgcggtg
ggtgggaaggagctggatcttcacggtctctacaccagagtcactactttaggcggattc
gcgaaggtttctgagaagaatcagtggggagaaattgttgaagagttcaactttcccaga
agttgttctaacgctgcctttgctttaaaacagtattacttgcgttacctagaaaagtac
gagaaagttcatcattttggggaggatgatgatgaggtaccaccaggcaatccaaagcca
cagcttcctattggtgcaattccatcttcctacaattaccagcaacacagtgtgtcggat
tatctgcgtcaaagttatgggctgtccatggactttaattcgccaaatgattataataaa
ttggtgctttcactgttatctggactcccaaatgaagtggactttgctattaacgtatgc
actctcctatcaaatgaaagcaagcacgtcatgcaacttgaaaaagatcctaaaatcatc
actttactacttgctaatgccggggtgtttgacgacactttaggatccttttccactgta
tttggagaagaatggaaagagaagactgatagagacttcgttaagttttggaaagacatc
gttgatgataatgaagttcgtgacctcatttctgacagaaacaagtctcatgaaggtaca
tcaggagaatggatttgggagtctttatttcatccacctcgaaagctgggcattaacgat
attgaaggacagcgggtacttcagattgcagtgattttgagaaatctttcctttgaggag
ggcaatgttaagctcttggcagctaatcgtacctgtcttcgtttcctattactttctgca
catagtcattttatttctttaaggcaattaggccttgacacattaggaaatattgcagct
gagcttttactggaccctgttgatttcaaaactactcatctgatgtttcatactgttaca
aaatgtctaatgtcaagggatagatttttaaagatgagaggcatggaaattttgggaaat
ctttgcaaagcagaagataatggtgttttaatttgtgaatatgtggatcaggattcctac
agagagatcatttgtcatctcactttacctgatgtgctgcttgtaatctcaacactcgag
gtgctatacatgctcacggaaatgggagatgttgcttgcacaaaaattgcaaaagtagaa
aagagcatagacatgttagtgtgtctggtttctatggatattcagatgtttggccctgat
gcactagctgcggtaaaactcattgaacacccaagttccagtcatcaaatgttatctgaa
attaggccacaagctatagagcaagtccaaacccagactcatgtagcatctgccccagct
tccagagcagttgtagcgcagcatgttgctccacctccaggaatagtggaaatagatagt
gagaagtttgcttgtcagtggctaaatgctcattttgaagtaaatccagattgttctgtt
tctcgagcagaaatgtattctgaatacctctcgacttgcagtaaattagctcgtggtgga
atcctaacatcaactggattttataaatgtcttagaacggtctttccaaatcatacagtg
aagagagtggaggattccagtagcaatgggcaggcacatattcatgtggtaggagtaaaa
cggagggctataccacttcccattcagatgtactatcagcagcaaccagtttctacttct
gttgttcgtgttgattctgttcctgatgtatctcctgctccttcacctgcaggaatccct
catggatcacaaaccataggaaaccattttcagaggactcctgttgccaaccaatcttca
aatctgactgcaacacaaatgtcttttcctgtacaaggtgttcatactgtggcacaaact
gtttcaagaattccacaaaatccttcacctcatacccaccagcaacaaaatgctccagtg
actgtcattcaaagtaaagctccaattccttgtgaagttgttaaggctacagttatccag
aattccataccccagacaggagttcctgttagtattgctgttggaggaggacctccacag
agttctgttgttcagaatcatagtacagggccacaacctgttacagttgtgaattctcag
acattgcttcaccatccatctgtaattccacagcagtctccattacacacagtggtacca
ggacagatcccttcaggcactcctgttacagtaattcaacaagctgtcccacagagtcat
atgtttggcagagtacagaacataccagcatgtacttctacagtttcacagggtcaacag
ttaatcaccacatcaccccaacctgtgcaaacttcatctcaacagacatcagctggtagc
cagtcacaagatactgttatcatagcacccccacagtatgtaacaacttctgcatccaat
attgtctcagcaacttcagtacagaattttcaggtagctacaggacaaatggttactatt
gctggtgtcccaagtccacaagcctcaagggtagggtttcagaacattgcaccaaaacct
ctcccttctcagcaagtttcatctacagtggtacagcagcctattcaacaaccacagcag
ccaacccaacaaagcgtagtgattgtaagccagccagctcaacaaggtcaaacttatgca
ccagccattcaccaaattgttcttgctaatccagcagctcttccagctggtcagacagtt
cagctaactggacaacctaacataactccatcttcttcaccatcacctgtcccagctact
aataaccaagtccctactgccatgtcgtcgtcctctacccctcaatcacagggaccacct
cctactgtcagtcaaatgttatctgtgaaaaggcagcaacagcagcaacattcaccagca
cccccaccacagcaggtacaagtacaagttcagcagccccaacaagtacagatgcaagtt
caacctcaacagtcgaatgcaggagttggtcagcctgcctctggtgagtcgagtctgatt
aaacagcttctgcttccgaaacgtggtccttcaacaccaggtggtaagcttattctccca
gctccacagattcctccccctaataatgcaagagctcctagccctcaggtggtctatcag
gtggccagtaaccaagccgcaggttttggagtgcaggggcaaactccagctcagcagcta
ttggttgggcagcaaaatgttcagttggtcccaagtgcaatgccaccctcagggggagta
caaactgtgcccatttcgaacttacaaatattgccaggtccactgatctcaaatagccca
gcaaccattttccaagggacttctggcaaccaggtaaccataacagttgtgccaaatacg
agttttgcacctgcaactgtgagtcagggaaatgcaactcagctcattgctccagcagga
attaccatgagcggaacgcagacaggagttggacttccagtacaaacgcttccagccact
caagcatctcctgctggacaatcatcatgtactactgctactcccccattcaaaggtgat
aaaataatttgccaaaaggaggaggaagcaaaggaagcaacaggtttacatgttcatgaa
cgtaaaattgaagtcatggagaacccgtcctgccgacgaggagccacaaacaccagcaat
ggggatacaaaggaaaatgaaatgcatgtgggaagtcttttaaatgggagaaagtacagt
gactcaagtctacctccttcaaactcagggaaaattcaaagtgagactaatcagtgctca
ctaatcagtaatgggccatcattggaattaggtgagaatggagcatctgggaaacagaac
tcagaacaaatagacatgcaagatatcaaaagtgatttgagaaaaccgctagttaatgga
atctgtgattttgataaaggagatggttctcatttaagcaaaaacattccaaatcataaa
acttccaatcatgtaggaaatggtgagatatctccaatggaaccacaagggactttagat
atcactcagcaagatactgccaaaggtgatcaactagaaagaatttctaatggacctgta
ttaactttgggtggttcatctgtgagcagtatacaggaggcttcaaatgcggcaacacag
caatttagtggtactgatttgcttaatggacctctagcttcaagtttgaattcagatgtg
cctcagcaacgcccaagtgtagttgtctcaccacattctacaacctctgttatacaggga
catcaaatcatagcagttcccgactcaggatcaaaagtatcccattctcctgccctatca
tctgacgttcggtctacaaatggcacagcagaatgcaaaactgtaaagaggccagcagag
gatactgatagggaaacagtcgcaggaattccaaataaagtaggagttagaattgttaca
atcagtgaccccaacaatgctggctgcagcgcaacaatggttgctgtgccagcaggagca
gatccaagcactgtagctaaagtagcaatagaaagtgctgttcagcaaaagcaacagcat
ccaccaacatatgtacagaatgtggtcccgcagaacactcctatgccaccttcaccagct
gtacaagtgcagggccagcctaacagttctcagccttctccattcagtggatccagtcag
cctggagatccaatgagaaaacctggacagaacttcatgtgtctgtggcagtcttgtaaa
aagtggtttcagacaccctcacaggttttctaccatgcagcaactgaacatggaggaaaa
gatgtatatccagggcagtgtctttgggaaggttgtgagccttttcagcgacagcggttt
tcttttattacccacttgcaggataagcactgttcaaaggatgccctacttgcaggatta
aaacaagatgaaccaggacaagcaggaagtcagaagtcttctaccaagcagccaactgta
gggggcacaagctcaactcctagagcacaaaaggccattgtgaatcatcccagtgctgca
cttatggctctgaggagaggatcaagaaaccttgtctttcgagattttacagatgaaaaa
gagggaccaataactaaacacatccgactaacagctgccttaatattaaaaaatattggt
aaatattcagaatgtggtcgcagattgttaaagagacatgaaaataacttatcagtgcta
gccattagtaacatggaagcttcctccacccttgccaaatgcctttatgaacttaatttt
acagttcagagtaaggaacaagaaaaagactcagaaatgctgcagtga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Pathway (2)   
   KEGG PATHWAY (2)   
Disease (4)   
   KEGG DISEASE (2)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (30)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (7)   
   OC (1)   
Protein sequence (6)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (4)   
DNA sequence (40)   
   RefSeq(nuc) (4)   
   GenBank (18)   
   EMBL (18)   
3D Structure (2)   
   PDB (2)   
Protein domain (2)   
   Pfam (2)   
All databases (91)   

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