KEGG   Homo sapiens (human): 200315
Entry
200315            CDS       T01001                                 
Symbol
APOBEC3A, A3A, ARP3, PHRBN, bK150C2.1
Name
(RefSeq) apolipoprotein B mRNA editing enzyme catalytic subunit 3A
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03250  Viral life cycle - HIV-1
hsa05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    200315 (APOBEC3A)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    200315 (APOBEC3A)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    200315 (APOBEC3A)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     200315 (APOBEC3A)
SSDB
Motif
Pfam: NAD2 APOBEC2 APOBEC_N NAD1 SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1
Other DBs
NCBI-GeneID: 200315
NCBI-ProteinID: NP_663745
OMIM: 607109
HGNC: 17343
Ensembl: ENSG00000128383
UniProt: P31941 A0A0K0MJ49
Structure
Position
22:38957609..38963184
AA seq 199 aa
MEASPASGPRHLMDPHIFTSNFNNGIGRHKTYLCYEVERLDNGTSVKMDQHRGFLHNQAK
NLLCGFYGRHAELRFLDLVPSLQLDPAQIYRVTWFISWSPCFSWGCAGEVRAFLQENTHV
RLRIFAARIYDYDPLYKEALQMLRDAGAQVSIMTYDEFKHCWDTFVDHQGCPFQPWDGLD
EHSQALSGRLRAILQNQGN
NT seq 600 nt   +upstreamnt  +downstreamnt
atggaagccagcccagcatccgggcccagacacttgatggatccacacatattcacttcc
aactttaacaatggcattggaaggcataagacctacctgtgctacgaagtggagcgcctg
gacaatggcacctcggtcaagatggaccagcacaggggctttctacacaaccaggctaag
aatcttctctgtggcttttacggccgccatgcggagctgcgcttcttggacctggttcct
tctttgcagttggacccggcccagatctacagggtcacttggttcatctcctggagcccc
tgcttctcctggggctgtgccggggaagtgcgtgcgttccttcaggagaacacacacgtg
agactgcgtatcttcgctgcccgcatctatgattacgaccccctatataaggaggcactg
caaatgctgcgggatgctggggcccaagtctccatcatgacctacgatgaatttaagcac
tgctgggacacctttgtggaccaccagggatgtcccttccagccctgggatggactagat
gagcacagccaagccctgagtgggaggctgcgggccattctccagaatcagggaaactga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (9)   
   KEGG ORTHOLOGY (1)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (16)   
   RefSeq(nuc) (2)   
   GenBank (7)   
   EMBL (7)   
3D Structure (12)   
   PDB (12)   
Protein domain (10)   
   Pfam (10)   
All databases (58)   

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