KEGG   Homo sapiens (human): 22827
Entry
22827             CDS       T01001                                 
Symbol
PUF60, FIR, RoBPI, SIAHBP1, VRJS
Name
(RefSeq) poly(U) binding splicing factor 60
  KO
K12838  poly(U)-binding-splicing factor PUF60
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Disease
H01800  Verheij syndrome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    22827 (PUF60)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    22827 (PUF60)
Spliceosome [BR:hsa03041]
 Complex A
  U2 snRNP components
   U2 related factors
    22827 (PUF60)
 Complex B
    22827 (PUF60)
SSDB
Motif
Pfam: RRM_1 RRM_7
Other DBs
NCBI-GeneID: 22827
NCBI-ProteinID: NP_510965
OMIM: 604819
HGNC: 17042
Ensembl: ENSG00000179950
UniProt: Q9UHX1
Structure
Position
8:complement(143816344..143829315)
AA seq 559 aa
MATATIALQVNGQQGGGSEPAAAAAVVAAGDKWKPPQGTDSIKMENGQSTAAKLGLPPLT
PEQQEALQKAKKYAMEQSIKSVLVKQTIAHQQQQLTNLQMAAVTMGFGDPLSPLQSMAAQ
RQRALAIMCRVYVGSIYYELGEDTIRQAFAPFGPIKSIDMSWDSVTMKHKGFAFVEYEVP
EAAQLALEQMNSVMLGGRNIKVGRPSNIGQAQPIIDQLAEEARAFNRIYVASVHQDLSDD
DIKSVFEAFGKIKSCTLARDPTTGKHKGYGFIEYEKAQSSQDAVSSMNLFDLGGQYLRVG
KAVTPPMPLLTPATPGGLPPAAAVAAAAATAKITAQEAVAGAAVLGTLGTPGLVSPALTL
AQPLGTLPQAVMAAQAPGVITGVTPARPPIPVTIPSVGVVNPILASPPTLGLLEPKKEKE
EEELFPESERPEMLSEQEHMSISGSSARHMVMQKLLRKQESTVMVLRNMVDPKDIDDDLE
GEVTEECGKFGAVNRVIIYQEKQGEEEDAEIIVKIFVEFSIASETHKAIQALNGRWFAGR
KVVAEVYDQERFDNSDLSA
NT seq 1680 nt   +upstreamnt  +downstreamnt
atggcgacggcgaccatagctctccaggtcaatggccagcaaggaggggggtccgagccg
gcggcggcggcggcagtggtggcagcgggagacaaatggaaacctccacagggcacagac
tccatcaagatggagaacgggcagagcacagccgccaagctggggctgcctcccctgacg
cccgagcagcaggaggcccttcagaaggccaagaagtacgccatggagcagagcatcaag
agtgtgctggtgaagcagaccatcgcgcaccagcagcagcagctcaccaacctgcagatg
gcagcagtgacaatgggctttggagatcctctctcacctttgcaatcgatggcggctcag
cggcagcgggcgctggccatcatgtgccgcgtctacgtgggctctatctactatgagctg
ggggaggacaccatccgccaggcctttgccccctttggccccatcaagagcatcgacatg
tcctgggactccgtcaccatgaagcacaagggctttgccttcgtggagtatgaggtcccc
gaagctgcacagctggccttggagcagatgaactcggtgatgctggggggcaggaacatc
aaggtgggcagacccagcaacatagggcaggcccagcccatcatagaccagttggctgag
gaggcacgggccttcaaccgcatctacgtggcctctgtgcaccaggacctctcagacgat
gacatcaagagcgtgtttgaggcctttggcaagatcaagtcctgcacactggcccgggac
cccacaactggcaagcacaagggctacggcttcattgagtacgagaaggcccagtcgtcc
caagatgctgtgtcttccatgaacctctttgacctgggtggccagtacttgcgggtgggc
aaggctgtcacaccgcccatgcccctactcacaccagccacgcctggaggcctcccacct
gccgctgctgtggcagctgctgcagccactgccaagatcacagctcaggaagcagtggcc
ggagcagcggtgctgggtaccctgggcacacctggactggtgtccccagcactgaccctg
gcccagcccctgggcactttgccccaggctgtcatggctgcccaggcacctggagtcatc
acaggtgtgaccccagcccgtcctcctatcccggtcaccatcccctcggtgggagtggtg
aaccccatcctggccagccctccaacgctgggtctcctggagcccaagaaggagaaggaa
gaagaggagctgtttcccgagtcagagcggccagagatgctgagcgagcaggagcacatg
agcatctcgggcagtagcgcccgacacatggtgatgcagaagctgctccgcaagcaggag
tctacagtgatggttctgcgcaacatggtggaccccaaggacatcgatgatgacctggaa
ggggaggtgacagaggagtgtggcaagttcggggccgtgaaccgcgtcatcatctaccaa
gagaaacaaggcgaggaggaggatgcagaaatcattgtcaagatctttgtggagttttcc
atagcctctgagactcataaggccatccaggccctcaatggccgctggtttgctggccgc
aaggtggtggctgaagtgtacgaccaggagcgttttgataacagtgacctctctgcgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (28)   
   KEGG ORTHOLOGY (1)   
   RefGene (7)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (15)   
   OC (1)   
Protein sequence (29)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (27)   
DNA sequence (67)   
   RefSeq(nuc) (27)   
   GenBank (20)   
   EMBL (20)   
3D Structure (16)   
   PDB (16)   
Protein domain (2)   
   Pfam (2)   
All databases (149)   

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