KEGG   Homo sapiens (human): 22998
Entry
22998             CDS       T01001                                 
Symbol
LIMCH1, LIMCH1A, LMO7B
Name
(RefSeq) LIM and calponin homology domains 1
  KO
K24422  LIM and calponin homology domains-containing protein 1
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04990 Domain-containing proteins not elsewhere classified [BR:hsa04990]
    22998 (LIMCH1)
Domain-containing proteins not elsewhere classified [BR:hsa04990]
 LIM domain-containing proteins
  Other lim domain-containing proteins
   22998 (LIMCH1)
SSDB
Motif
Pfam: DUF4757 CH LIM
Other DBs
NCBI-GeneID: 22998
NCBI-ProteinID: NP_055803
OMIM: 617750
HGNC: 29191
Ensembl: ENSG00000064042
UniProt: Q9UPQ0
Position
4:41359607..41700044
AA seq 1083 aa
MACPALGLEALQPLQPEPPPEPAFSEAQKWIEQVTGRSFGDKDFRTGLENGILLCELLNA
IKPGLVKKINRLPTPIAGLDNIILFLRGCKELGLKESQLFDPSDLQDTSNRVTVKSLDYS
RKLKNVLVTIYWLGKAANSCTSYSGTTLNLKEFEGLLAQMRKDTDDIESPKRSIRDSGYI
DCWDSERSDSLSPPRHGRDDSFDSLDSFGSRSRQTPSPDVVLRGSSDGRGSDSESDLPHR
KLPDVKKDDMSARRTSHGEPKSAVPFNQYLPNKSNQTAYVPAPLRKKKAEREEYRKSWST
ATSPLGGERPFRYGPRTPVSDDAESTSMFDMRCEEEAAVQPHSRARQEQLQLINNQLREE
DDKWQDDLARWKSRRRSVSQDLIKKEEERKKMEKLLAGEDGTSERRKSIKTYREIVQEKE
RRERELHEAYKNARSQEEAEGILQQYIERFTISEAVLERLEMPKILERSHSTEPNLSSFL
NDPNPMKYLRQQSLPPPKFTATVETTIARASVLDTSMSAGSGSPSKTVTPKAVPMLTPKP
YSQPKNSQDVLKTFKVDGKVSVNGETVHREEEKERECPTVAPAHSLTKSQMFEGVARVHG
SPLELKQDNGSIEINIKKPNSVPQELAATTEKTEPNSQEDKNDGGKSRKGNIELASSEPQ
HFTTTVTRCSPTVAFVEFPSSPQLKNDVSEEKDQKKPENEMSGKVELVLSQKVVKPKSPE
PEATLTFPFLDKMPEANQLHLPNLNSQVDSPSSEKSPVMTPQFKFWAWDPEEERRRQEKW
QQEQERLLQERYQKEQDKLKEEWEKAQKEVEEEERRYYEEERKIIEDTVVPFTVSSSSAD
QLSTSSSMTEGSGTMNKIDLGNCQDEKQDRRWKKSFQGDDSDLLLKTRESDRLEEKGSLT
EGALAHSGNPVSKGVHEDHQLDTEAGAPHCGTNPQLAQDPSQNQQTSNPTHSSEDVKPKT
LPLDKSINHQIESPSERRKKSPREHFQAGPFSPCSPTPPGQSPNRSISGKKLCSSCGLPL
GKGAAMIIETLNLYFHIQCFRCGICKGQLGDAVSGTDVRIRNGLLNCNDCYMRSRSAGQP
TTL
NT seq 3252 nt   +upstreamnt  +downstreamnt
atggcttgtcccgctctcggtctggaagctcttcagcccctgcagcccgagccgcccccc
gagcccgccttctccgaggcgcagaagtggattgagcaagtaactggcagaagttttggt
gataaagattttcggacaggtttagaaaatggaatcctcctctgcgagttgctgaatgct
ataaagccaggacttgttaaaaagatcaatagattgcctacccccattgcaggactggac
aatattatcttattcttgagaggttgtaaagagctcggccttaaagaatctcaacttttt
gacccgagtgacctccaggatacatccaacagagtaacagtcaagagccttgattatagt
aggaagctgaaaaatgtattagttaccatttactggctgggaaaagcagcaaacagctgc
acatcctacagcggaacgacactaaacctgaaggagtttgaaggattgttggctcagatg
cgaaaggacactgatgacattgaaagtcctaaacgcagtatccgagacagtggctacatc
gactgctgggattccgagcgcagcgactccctctctcctcctcgccacggcagagatgat
tccttcgacagcctggattcctttggctctcgctctcggcagacgccttcaccagatgta
gtcctcaggggaagcagcgatgggagaggaagcgactctgaatccgacttgcctcatcgg
aagctgccagatgtgaagaaggatgacatgtctgcacggcggacttcccatggtgagccg
aaatcagcagtgccttttaaccagtacctcccgaacaaaagcaatcagacggcctacgtc
cccgcgcctctgagaaagaagaaagcagagagagaggaataccgcaagagctggagtacc
gccacctccccgctgggtggggagaggcccttcagatacggtccgagaactcctgtgtct
gatgacgcagagagcaccagcatgtttgacatgcggtgtgaggaggaggccgcggtgcag
ccgcacagcagggcccgccaggagcagctgcagctgataaataaccagctgagggaagag
gacgacaaatggcaagatgacctggctcgttggaagagtcgtagaagaagtgtttctcag
gacttaatcaagaaagaggaagaaaggaaaaaaatggagaagttactggctggagaagat
gggacaagtgaacgaaggaaaagcatcaaaacctacagagaaattgttcaagaaaaagag
cggagagagagagagctgcatgaagcatataagaacgctcggtcccaggaggaggcagag
gggatccttcaacagtacattgagaggttcaccatcagtgaggctgttctcgaacgcttg
gagatgccaaaaattctggaaagaagccattcaacagagccaaatttatcctccttcctg
aatgaccccaatcccatgaaatacctgcggcaacagtcactgcctccacccaaattcact
gccactgttgaaaccaccattgctcgtgccagtgttctggataccagcatgtcagcaggc
agtgggtctccaagcaaaactgtcactcccaaagcagtgcctatgctgacacccaagcct
tactcccagcccaaaaattctcaagatgttctgaagacctttaaggtagacgggaaagtc
agtgtgaatggagagacggttcatagagaggaggagaaggaaagagagtgtcccacggtg
gcacctgcccactccttaaccaaatcccagatgtttgaaggtgtggccagagtgcacggg
tctccactggagctgaaacaagacaacggtagcatcgagatcaacataaagaagccaaac
tctgttccccaagagctcgcagcaaccactgagaaaacggaaccgaatagtcaagaggac
aagaatgatggtggaaaatcaagaaaagggaatatagaacttgcctcatcagaaccacag
cattttacaacaactgtgactcgatgcagcccgaccgtggcctttgtggaatttccctcc
agcccccagctgaagaatgatgtgtcggaagaaaaagaccagaagaaaccagaaaatgaa
atgagtggaaaggtggagttggtgctgtcacaaaaggtggtaaagccaaaatctccagaa
cccgaagcaacgctgacatttccatttctggacaaaatgcctgaagccaaccaactacat
ttgccaaatctcaattctcaagtggattctccaagcagtgagaagtcacctgttatgaca
cctcagtttaagttctgggcatgggacccagaagaggagcgcaggcgacaggaaaaatgg
caacaggaacaggaacgtttgctccaggagagataccagaaggagcaggacaagctgaaa
gaagagtgggaaaaggcccaaaaggaggtggaagaggaagaacgcagatactatgaggag
gagcgtaagataattgaagacactgtggttccatttactgtttcttcaagttccgctgac
cagctgtctacctcttcctccatgactgaaggcagtgggacaatgaataagatagacctg
ggaaactgtcaagatgaaaaacaagacagaagatggaagaaatcattccagggagatgac
agtgacttattgctgaagactagggaaagtgatcgactggaggagaagggcagcctaact
gaaggggccttggctcattctgggaaccctgtatcaaaaggagtccatgaagaccatcag
ctggataccgaggctggggccccacactgtggaacaaacccacagcttgctcaggatcca
tcccagaatcagcagacatcaaatccaacgcacagttcagaagatgtgaagccaaaaacc
ctcccgctggataaaagcattaaccatcagatcgagtctcccagtgaaaggcggaagaaa
agtccccgagagcacttccaggctgggcctttctctccctgttctcccacccctcccggt
cagtcaccaaacaggtctataagtggaaagaagctgtgctcttcctgtgggcttcctttg
ggtaaaggagctgcaatgatcatcgagaccctcaatctctattttcacatccagtgtttc
aggtgtggaatttgtaaaggccagcttggagatgcagtgagtgggacggatgttaggatt
cgaaatggtctcctgaactgtaatgattgctacatgcgatccagaagtgccgggcagcct
acaacattgtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (8)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (90)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (88)   
DNA sequence (148)   
   RefSeq(nuc) (88)   
   GenBank (30)   
   EMBL (30)   
Protein domain (3)   
   Pfam (3)   
All databases (263)   

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