KEGG   Homo sapiens (human): 23098
Entry
23098             CDS       T01001                                 
Symbol
SARM1, HsTIR, MyD88-5, SAMD2, SARM, hSARM1
Name
(RefSeq) sterile alpha and TIR motif containing 1
Organism
hsa  Homo sapiens (human)
SSDB
Motif
Pfam: SAM_2 SAM_1 TIR_2 SAM_3 TIR SAM_PNT HEAT_2 GHMP_kinases_C Carb_kinase DUF4704 Arm
Other DBs
NCBI-GeneID: 23098
NCBI-ProteinID: NP_055892
OMIM: 607732
HGNC: 17074
Ensembl: ENSG00000004139
UniProt: Q6SZW1 Q05B42 Q0D2N8
Structure
Position
17:28371694..28404049
AA seq 724 aa
MVLTLLLSAYKLCRFFAMSGPRPGAERLAVPGPDGGGGTGPWWAAGGRGPREVSPGAGTE
VQDALERALPELQQALSALKQAGGARAVGAGLAEVFQLVEEAWLLPAVGREVAQGLCDAI
RLDGGLDLLLRLLQAPELETRVQAARLLEQILVAENRDRVARIGLGVILNLAKEREPVEL
ARSVAGILEHMFKHSEETCQRLVAAGGLDAVLYWCRRTDPALLRHCALALGNCALHGGQA
VQRRMVEKRAAEWLFPLAFSKEDELLRLHACLAVAVLATNKEVEREVERSGTLALVEPLV
ASLDPGRFARCLVDASDTSQGRGPDDLQRLVPLLDSNRLEAQCIGAFYLCAEAAIKSLQG
KTKVFSDIGAIQSLKRLVSYSTNGTKSALAKRALRLLGEEVPRPILPSVPSWKEAEVQTW
LQQIGFSKYCESFREQQVDGDLLLRLTEEELQTDLGMKSGITRKRFFRELTELKTFANYS
TCDRSNLADWLGSLDPRFRQYTYGLVSCGLDRSLLHRVSEQQLLEDCGIHLGVHRARILT
AAREMLHSPLPCTGGKPSGDTPDVFISYRRNSGSQLASLLKVHLQLHGFSVFIDVEKLEA
GKFEDKLIQSVMGARNFVLVLSPGALDKCMQDHDCKDWVHKEIVTALSCGKNIVPIIDGF
EWPEPQVLPEDMQAVLTFNGIKWSHEYQEATIEKIIRFLQGRSSRDSSAGSDTSLEGAAP
MGPT
NT seq 2175 nt   +upstreamnt  +downstreamnt
atggtcctgacgctgcttctctccgcctacaagctgtgtcgcttcttcgccatgtcgggc
ccacggccgggcgccgagcggctggcggtgcctgggccagatgggggcggtggcacgggc
ccatggtgggctgcgggtggccgcgggccccgcgaagtgtcgccgggggcaggcaccgag
gtgcaggacgccctggagcgcgcgctgccggagctgcagcaggccttgtccgcgctgaag
caggcgggcggcgcgcgggccgtgggcgccggcctggccgaggtcttccaactggtggag
gaggcctggctgctgccggccgtgggccgcgaggtagcccagggtctgtgcgacgccatc
cgcctcgatggcggcctcgacctgctgttgcggctgctgcaggcgccggagttggagacg
cgtgtgcaggccgcgcgcctgctggagcagatcctggtggctgagaaccgagaccgcgtg
gcgcgcattgggctgggcgtgatcctgaacctggcgaaggaacgcgaacccgtagagctg
gcgcggagcgtggcaggcatcttggagcacatgttcaagcattcggaggagacatgccag
aggctggtggcggccggcggcctggacgcggtgctgtattggtgccgccgcacggacccc
gcgctgctgcgccactgcgcgctggcgctgggcaactgcgcgctgcacgggggccaggcg
gtgcagcgacgcatggtagagaagcgcgcagccgagtggctcttcccgctcgccttctcc
aaggaggacgagctgcttcggctgcacgcctgcctcgcagtagcggtgttggcgactaac
aaggaggtggagcgcgaggtggagcgctcgggcacgctggcgctcgtggagccgcttgtg
gcctcgctggaccctggccgcttcgcccgctgtctggtggacgccagcgacacaagccag
ggccgcgggcccgacgacctgcagcgcctcgtgccgttgctcgactctaaccgcttggag
gcgcagtgcatcggggctttctacctctgcgccgaggctgccatcaagagcctgcaaggc
aagaccaaggtgttcagcgacatcggcgccatccagagcctgaaacgcctggtttcctac
tctaccaatggcactaagtcggcgctggccaagcgcgcgctgcgcctgctgggcgaggag
gtgccacggcccatcctgccctccgtgcccagctggaaggaggccgaggttcagacgtgg
ctgcagcagatcggtttctccaagtactgcgagagcttccgggagcagcaggtggatggc
gacctgcttctgcggctcacggaggaggaactccagaccgacctgggcatgaaatcgggc
atcacccgcaagaggttctttagggagctcacggagctcaagaccttcgccaactattct
acgtgcgaccgcagcaacctggcggactggctgggcagcctggacccgcgcttccgccag
tacacctacggcctggtcagctgcggcctggaccgctccctgctgcaccgcgtgtctgag
cagcagctgctggaagactgcggcatccacctgggcgtgcaccgcgcccgcatcctcacg
gcggccagagaaatgctacactccccgctgccctgtactggtggcaaacccagtggggac
actccagatgtcttcatcagctaccgccggaactcaggttcccagctggccagtctcctg
aaggtgcacctgcagctgcatggcttcagtgtcttcattgatgtggagaagctggaagca
ggcaagttcgaggacaaactcatccagagtgtcatgggtgcccgcaactttgtgttggtg
ctatcacctggagcactggacaagtgcatgcaagaccatgactgcaaggattgggtgcat
aaggagattgtgactgctttaagctgcggcaagaacattgtgcccatcattgatggcttc
gagtggcctgagccccaggtcctgcctgaggacatgcaggctgtgcttactttcaacggt
atcaagtggtcccacgaataccaggaggccaccattgagaagatcatccgcttcctgcag
ggccgctcctcccgggactcatctgcaggctctgacaccagtttggagggtgctgcaccc
atgggtccaacctaa

  All links  
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (10)   
   RefGene (3)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (5)   
   UniProt (3)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (23)   
   RefSeq(nuc) (1)   
   GenBank (11)   
   EMBL (11)   
3D Structure (38)   
   PDB (38)   
Protein domain (11)   
   Pfam (11)   
All databases (89)   

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