KEGG   Homo sapiens (human): 24148
Entry
24148             CDS       T01001                                 
Symbol
PRPF6, ANT-1, ANT1, C20orf14, Prp6, RP60, SNRNP102, TOM, U5-102K, hPrp6
Name
(RefSeq) pre-mRNA processing factor 6
  KO
K12855  pre-mRNA-processing factor 6
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Disease
H00527  Retinitis pigmentosa
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    24148 (PRPF6)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    24148 (PRPF6)
Spliceosome [BR:hsa03041]
 Complex B
  U4/U6.U5 tri-snRNP components
   U5 snRNP specific factors
    24148 (PRPF6)
 Complex C
   U5 SnRNP specific factors
    24148 (PRPF6)
SSDB
Motif
Pfam: PRP1_N TPR_14 TPR_19 TPR_17 TPR_16 TPR_2 Suf TPR_8 TPR_1 ChAPs
Other DBs
NCBI-GeneID: 24148
NCBI-ProteinID: NP_036601
OMIM: 613979
HGNC: 15860
Ensembl: ENSG00000101161
UniProt: O94906
Structure
Position
20:63981132..64033100
AA seq 941 aa
MNKKKKPFLGMPAPLGYVPGLGRGATGFTTRSDIGPARDANDPVDDRHAPPGKRTVGDQM
KKNQAADDDDEDLNDTNYDEFNGYAGSLFSSGPYEKDDEEADAIYAALDKRMDERRKERR
EQREKEEIEKYRMERPKIQQQFSDLKRKLAEVTEEEWLSIPEVGDARNKRQRNPRYEKLT
PVPDSFFAKHLQTGENHTSVDPRQTQFGGLNTPYPGGLNTPYPGGMTPGLMTPGTGELDM
RKIGQARNTLMDMRLSQVSDSVSGQTVVDPKGYLTDLNSMIPTHGGDINDIKKARLLLKS
VRETNPHHPPAWIASARLEEVTGKLQVARNLIMKGTEMCPKSEDVWLEAARLQPGDTAKA
VVAQAVRHLPQSVRIYIRAAELETDIRAKKRVLRKALEHVPNSVRLWKAAVELEEPEDAR
IMLSRAVECCPTSVELWLALARLETYENARKVLNKARENIPTDRHIWITAAKLEEANGNT
QMVEKIIDRAITSLRANGVEINREQWIQDAEECDRAGSVATCQAVMRAVIGIGIEEEDRK
HTWMEDADSCVAHNALECARAIYAYALQVFPSKKSVWLRAAYFEKNHGTRESLEALLQRA
VAHCPKAEVLWLMGAKSKWLAGDVPAARSILALAFQANPNSEEIWLAAVKLESENDEYER
ARRLLAKARSSAPTARVFMKSVKLEWVQDNIRAAQDLCEEALRHYEDFPKLWMMKGQIEE
QKEMMEKAREAYNQGLKKCPHSTPLWLLLSRLEEKIGQLTRARAILEKSRLKNPKNPGLW
LESVRLEYRAGLKNIANTLMAKALQECPNSGILWSEAIFLEARPQRRTKSVDALKKCEHD
PHVLLAVAKLFWSQRKITKAREWFHRTVKIDSDLGDAWAFFYKFELQHGTEEQQEEVRKR
CESAEPRHGELWCAVSKDIANWQKKIGDILRLVAGRIKNTF
NT seq 2826 nt   +upstreamnt  +downstreamnt
atgaacaagaagaagaaaccgttcctagggatgcccgcgcccctcggctacgtgccgggg
ctgggccggggcgccactggcttcaccacgcggtcagacattgggcccgcccgtgatgca
aatgaccctgtggatgatcgccatgcacccccaggcaagagaaccgttggggaccagatg
aagaaaaatcaggctgctgacgatgacgacgaggatctaaatgacaccaattacgatgag
tttaatggctatgctgggagcctcttctcaagtggaccctacgagaaagatgatgaggaa
gcagatgctatctatgcagccctggataaaaggatggatgaaagaagaaaagaaagacgg
gagcaaagggagaaagaagaaatagagaaatatcgtatggaacgccccaaaatccaacag
cagttctcagacctcaagaggaagttggcagaagtcacagaagaagagtggctgagcatc
cccgaggttggcgatgccagaaataaacgtcagcggaacccacgctatgagaagctgacc
cctgttcctgacagtttctttgccaaacatttacagaccggagagaaccatacctcagtg
gatccccgacaaactcaatttggaggtcttaacacaccctatccaggtggactaaacact
ccatacccaggtggaatgacgccaggactgatgacacctggcacaggtgagctggacatg
aggaagattggccaagcgaggaacactctgatggacatgaggctgagccaggtgtctgac
tccgtgagtggacagaccgtcgttgaccccaaaggctacctgacggatttaaattccatg
atcccgacacacggaggagacatcaatgatatcaagaaggcgcgactgctcctcaagtct
gttcgggagacgaaccctcatcacccgccagcctggattgcatcagcccgcctggaagaa
gtcactgggaagctacaagtagctcggaaccttatcatgaaggggacggagatgtgcccc
aagagtgaagatgtctggctggaagcagccaggttgcagcctggggacacagccaaggcc
gtggtagcccaagctgtccgtcatctcccacagtctgtcaggatttacatcagagccgca
gagctggaaacggacattcgtgcaaagaagcgggttcttcggaaagccctcgagcatgtt
ccaaactcggttcgcttgtggaaagcagccgttgagctggaagaacctgaagatgctaga
atcatgctgagccgagctgtggagtgctgccccaccagcgtggagctctggcttgctctg
gcaaggctggagacctatgaaaatgcccgcaaggtcttgaacaaggcgcgggagaacatt
cctacagaccgacatatctggatcacggctgctaagctggaggaagccaatgggaacacg
cagatggtggagaagatcatcgaccgagccatcacctcgctgcgggccaacggtgtggag
atcaaccgtgagcagtggatccaggatgccgaggaatgtgacagggctgggagtgtggcc
acctgccaggccgtcatgcgtgccgtgattgggattgggattgaggaggaagatcggaag
catacctggatggaggatgctgacagttgtgtagcccacaatgccctggagtgtgcacga
gccatctacgcctacgccctgcaggtgttccccagcaagaagagtgtgtggctgcgcgcc
gcgtacttcgagaagaaccatggcactcgggagtccctggaagcactcctgcagagggct
gtggcccactgccccaaagcagaggtgctgtggctcatgggcgccaagtccaagtggctg
gcaggggatgtgcctgcagcaaggagcatcctggccctggccttccaggccaaccccaac
agtgaggagatctggctggcagccgtgaagctggagtccgagaatgatgagtacgagcgg
gcccggaggctgctggccaaggcgcggagcagtgcccccaccgcccgggtgttcatgaag
tctgtgaagctggagtgggtgcaagacaacatcagggcagcccaagatctgtgcgaggag
gccctgcggcactatgaggacttccccaagctgtggatgatgaaggggcagatcgaggag
cagaaggagatgatggagaaggcgcgggaagcctataaccaggggttgaagaagtgtccc
cactccacacccctgtggcttttgctctctcggctggaggagaagattgggcagcttact
cgagcacgggccattttggaaaagtctcgtctgaagaacccaaagaaccctgggctgtgg
ttggagtccgtgcggctggagtaccgtgcggggctgaagaacatcgcaaatacactcatg
gccaaggcgctgcaggagtgccccaactccggtatcctgtggtctgaggccatcttcctc
gaggcaaggccccagaggaggaccaagagcgtggatgccctgaagaagtgtgagcatgac
ccccatgtgctcctggccgtggccaagctgttttggagtcagcggaagatcaccaaggcc
agggagtggttccaccgcactgtgaagattgactcggacctgggggatgcctgggccttc
ttctacaagtttgagctgcagcatggcactgaggagcagcaggaggaggtgaggaagcgc
tgtgagagtgcagagcctcggcatggggagctgtggtgcgccgtgtccaaggacatcgcc
aactggcagaagaagatcggggacatccttaggctggtggccggccgcatcaagaacacc
ttctga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (3)   
   KEGG DISEASE (1)   
   OMIM (2)   
Genome (1)   
   KEGG GENOME (1)   
Gene (34)   
   KEGG ORTHOLOGY (1)   
   RefGene (24)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (4)   
   OC (1)   
Protein sequence (5)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (3)   
DNA sequence (25)   
   RefSeq(nuc) (5)   
   GenBank (10)   
   EMBL (10)   
3D Structure (6)   
   PDB (6)   
Protein domain (10)   
   Pfam (10)   
All databases (87)   

Download RDF
DBGET integrated database retrieval system