KEGG   Homo sapiens (human): 25766
Entry
25766             CDS       T01001                                 
Symbol
PRPF40B, HYPC
Name
(RefSeq) pre-mRNA processing factor 40 homolog B
  KO
K12821  pre-mRNA-processing factor 40
Organism
hsa  Homo sapiens (human)
Pathway
hsa03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    25766 (PRPF40B)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03041 Spliceosome [BR:hsa03041]
    25766 (PRPF40B)
Spliceosome [BR:hsa03041]
 Complex A
  U1 snRNP components
   U1 related factors
    25766 (PRPF40B)
 Complex B
    25766 (PRPF40B)
SSDB
Motif
Pfam: FF WW DUF4936 RhoGAP-FF1
Other DBs
NCBI-GeneID: 25766
NCBI-ProteinID: NP_036404
HGNC: 25031
Ensembl: ENSG00000110844
UniProt: Q6NWY9
Position
12:49622646..49644665
AA seq 858 aa
MPPPGIPPPFPPMGLPPMSQRPPAIPPMPPGILPPMLPPMGAPPPLTQIPGMVPPMMPGM
LMPAVPVTAATAPGADTASSAVAGTGPPRALWSEHVAPDGRIYYYNADDKQSVWEKPSVL
KSKAELLLSQCPWKEYKSDTGKPYYYNNQSKESRWTRPKDLDDLEVLVKQEAAGKQQQQL
PQTLQPQPPQPQPDPPPVPPGPTPVPTGLLEPEPGGSEDCDVLEATQPLEQGFLQQLEEG
PSSSGQHQPQQEEEESKPEPERSGLSWSNREKAKQAFKELLRDKAVPSNASWEQAMKMVV
TDPRYSALPKLSEKKQAFNAYKAQREKEEKEEARLRAKEAKQTLQHFLEQHERMTSTTRY
RRAEQTFGELEVWAVVPERDRKEVYDDVLFFLAKKEKEQAKQLRRRNIQALKSILDGMSS
VNFQTTWSQAQQYLMDNPSFAQDHQLQNMDKEDALICFEEHIRALEREEEEERERARLRE
RRQQRKNREAFQTFLDELHETGQLHSMSTWMELYPAVSTDVRFANMLGQPGSTPLDLFKF
YVEELKARFHDEKKIIKDILKVNTAFEDFAHVISFDKRAAALDAGNIKLTFNSLLEKAEA
REREREKEEARRMRRREAAFRSMLRQAVPALELGTAWEEVRERFVCDSAFEQITLESERI
RLFREFLQVLEQTECQHLHTKGRKHGRKGKKHHHKRSHSPSGSESEEEELPPPSLRPPKR
RRRNPSESGSEPSSSLDSVESGGAALGGRGSPSSHLLGADHGLRKAKKPKKKTKKRRHKS
NSPESETDPEEKAGKESDEKEQEQDKDRELQQAELPNRSPGFGIKKEKTGWDTSESELSE
GELERRRRTLLQQLDDHQ
NT seq 2577 nt   +upstreamnt  +downstreamnt
atgccccctccagggatccccccaccctttcctccgatggggctaccccccatgagtcag
agaccaccagctatcccccccatgccacctggcatcctgcccccaatgcttccaccaatg
ggggcgccaccaccactcacacagataccaggaatggtacctccgatgatgccaggaatg
ctgatgccagcggtgcctgtcaccgcagcgacggctccgggtgcggacaccgccagctct
gctgtggctgggacaggccctccgagggccctatggagtgagcatgtggccccagatggg
cgcatctactactacaatgctgacgacaagcagtccgtgtgggagaagcccagcgtgctc
aagtccaaggcagagctgctcctgtcccaatgtccctggaaagagtacaagtcggacaca
ggcaaaccttattactataacaaccagagtaaagagtcccgctggacccggcccaaggat
ctggatgacctagaggttctagtcaaacaagaggctgcagggaaacagcagcagcagctg
ccacagacacttcagccacagccacctcagccacagcctgaccccccacctgtgcctcct
ggccccaccccagtgcccacaggcctcctggaacctgagccaggtgggagtgaagattgt
gatgtgttggaggccacccagcccctggaacaggggttcctgcagcagctggaggagggc
cccagcagttctggacagcatcagccacagcaggaggaggaggaatcaaagccagaacca
gagaggtctggcctcagttggagcaaccgggagaaggcaaagcaggcattcaaggaactg
ctgagggacaaggctgtcccctccaatgcctcatgggaacaggccatgaagatggtggtc
accgacccccgttacagtgccttgcctaaactgagtgagaaaaagcaggcattcaatgcc
tacaaggcgcagcgggagaaggaggagaaggaggaggcccggctaagggccaaagaggcc
aagcagaccctgcagcatttcctggagcagcatgaacgcatgacctccaccacccgctac
cggcgggcagaacagacctttggggagctggaggtctgggctgtggtccctgagagggat
cgaaaagaggtttatgatgatgtcctcttcttcctggccaagaaggagaaggaacaggcc
aagcagctccggcgccgcaatatccaggccctaaagagcatcctggatgggatgagtagt
gtcaacttccaaaccacgtggtcccaggcccagcagtacctcatggataaccccagcttt
gctcaggaccatcagctgcagaacatggacaaggaagatgcactgatctgttttgaggag
cacatccgagctttggagagggaagaggaggaggaacgggagcgggcccggcttcgggag
cgacgccaacaacgcaagaatcgggaggccttccagaccttcctggacgagctgcatgag
acagggcagctgcactctatgtccacctggatggagctatatccagcagtcagcactgat
gtccgctttgccaacatgctgggccagccgggctccacccctctggacttattcaagttc
tatgtggaggagttgaaggcacgattccatgatgaaaagaagatcattaaggacatcctt
aaggtgaacacggcctttgaggacttcgcccacgtcataagctttgacaagagggctgcc
gcactggacgcaggcaacatcaagctgaccttcaatagtctgctggagaaagcagaggca
cgggagagggagcgggagaaggaggaggcacgcaggatgcggcgcagggaagctgccttt
cgaagcatgctgaggcaggctgtgcctgctctggagctaggcactgcctgggaagaggtc
cgtgagcgttttgtgtgtgactcagcctttgagcagatcaccctggagtcggagcggatc
cggctcttccgggagttcctacaggtgctggagcagactgaatgccagcacctccacacc
aaaggccgaaagcatggcaggaaaggcaagaagcaccatcacaagcgttcccactcaccc
tcaggctctgagtcagaagaagaggagctgcccccaccatctctccggccccccaagcgg
aggaggcggaacccctcagagtcaggctctgagccctcttcctcacttgattcagttgaa
agtgggggtgctgcccttggaggacggggctccccttcctcccatcttcttggagcagat
catggccttcggaaagccaagaaaccaaaaaagaaaactaagaagagaagacacaagtcg
aatagtcctgagagtgagacagaccctgaggagaaagctggcaaggagagcgatgagaaa
gaacaagaacaggacaaggacagggagctccaacaggcagagctccctaaccgttcccca
ggctttggaatcaagaaggagaagacaggctgggacacgtcagaaagtgagctgagtgag
ggtgagctggagaggcggcggcggacactcctacagcagctggatgatcaccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (44)   
   KEGG ORTHOLOGY (1)   
   RefGene (18)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (20)   
   OC (1)   
Protein sequence (39)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (37)   
DNA sequence (58)   
   RefSeq(nuc) (38)   
   GenBank (10)   
   EMBL (10)   
Protein domain (4)   
   Pfam (4)   
All databases (149)   

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