KEGG   Homo sapiens (human): 25879
Entry
25879             CDS       T01001                                 
Symbol
DCAF13, GM83, HSPC064, Sof1, WDSOF1
Name
(RefSeq) DDB1 and CUL4 associated factor 13
  KO
K11806  DDB1- and CUL4-associated factor 13
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hsa03009]
    25879 (DCAF13)
   04121 Ubiquitin system [BR:hsa04121]
    25879 (DCAF13)
Ribosome biogenesis [BR:hsa03009]
 Eukaryotic type
  90S particles
   Other 90S particles
    25879 (DCAF13)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Multi subunit Ring-finger type E3
   Cul4 complex
    Target recognizing subunit (DCAF)
     25879 (DCAF13)
SSDB
Motif
Pfam: Sof1 WD40 eIF2A ANAPC4_WD40 MIOS_WD40 WAC_Acf1_DNA_bd
Other DBs
NCBI-GeneID: 25879
NCBI-ProteinID: NP_056235
OMIM: 616196
HGNC: 24535
Ensembl: ENSG00000164934
UniProt: Q9NV06 A0A087WT20
Structure
Position
8:103415386..103443453
AA seq 445 aa
MKVKMLSRNPDNYVRETKLDLQRVPRNYDPALHPFEVPREYIRALNATKLERVFAKPFLA
SLDGHRDGVNCLAKHPEKLATVLSGACDGEVRIWNLTQRNCIRTIQAHEGFVRGICTRFC
GTSFFTVGDDKTVKQWKMDGPGYGDEEEPLHTILGKTVYTGIDHHWKEAVFATCGQQVDI
WDEQRTNPICSMTWGFDSISSVKFNPIETFLLGSCASDRNIVLYDMRQATPLKKVILDMR
TNTICWNPMEAFIFTAANEDYNLYTFDMRALDTPVMVHMDHVSAVLDVDYSPTGKEFVSA
SFDKSIRIFPVDKSRSREVYHTKRMQHVICVKWTSDSKYIMCGSDEMNIRLWKANASEKL
GVLTSREKAAKDYNQKLKEKFQHYPHIKRIARHRHLPKSIYSQIQEQRIMKEARRRKEVN
RIKHSKPGSVPLVSEKKKHVVAVVK
NT seq 1338 nt   +upstreamnt  +downstreamnt
atgaaggtgaagatgctgagccggaatccggacaattatgtccgcgaaaccaagttggac
ttacagagagttccaagaaactatgatcctgctttacatccttttgaggtcccacgagaa
tatataagagctttaaatgctaccaaactggaacgagtatttgcaaaaccattccttgct
tcgctggatggtcaccgtgatggagtcaattgcttggcaaagcatccagagaagctggct
actgtcctttctggggcgtgtgatggagaggttagaatttggaatctaactcagcggaat
tgtatccgtacaatacaagcacatgaaggctttgtacgaggaatatgtactcgcttttgt
gggacttcttttttcactgttggtgatgacaaaactgtgaagcagtggaaaatggatggg
ccaggctatggagacgaggaagagccattacatacaatattaggaaagacagtgtatact
gggattgatcatcactggaaagaagctgtttttgccacatgtggacagcaagtagacatt
tgggatgaacaaagaactaatcctatatgttcaatgacctggggatttgacagtataagt
agtgttaaatttaacccaattgagacatttctcttgggaagttgtgcatctgacaggaat
atagtactgtacgatatgaggcaagctactcctttgaaaaaggttatcttagatatgaga
acaaatacaatctgttggaaccctatggaagctttcatttttacagcagcaaatgaagat
tataacttatatacttttgatatgcgtgcactggacactcctgtaatggtccatatggat
catgtatctgcagtgcttgatgtggattactctcccactgggaaggagtttgtgtctgct
agtttcgataaatctattcgaatctttcctgtagacaaaagtcgaagcagggaggtatat
catacaaagagaatgcaacatgttatctgtgtaaaatggacttctgacagcaagtatatt
atgtgtggatctgatgaaatgaacattcgcctgtggaaagctaatgcttctgaaaaattg
ggtgtgcttacatcacgagaaaaagcagccaaggattataaccagaaattgaaggagaaa
tttcagcattatcctcatataaaacgtatagctcgtcatcgacatctaccaaaatctatc
tatagccagattcaggaacagcgcatcatgaaagaagctcgtcgacgaaaggaagtgaat
cgtattaaacacagcaagcctggatctgtgccacttgtgtcagagaagaagaaacacgta
gtggcagttgtaaaataa

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Ontology (3)   
   KEGG BRITE (3)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (43)   
   KEGG ORTHOLOGY (1)   
   RefGene (36)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (5)   
   UniProt (2)   
   SWISS-PROT (1)   
   RefSeq(pep) (2)   
DNA sequence (26)   
   RefSeq(nuc) (2)   
   GenBank (12)   
   EMBL (12)   
3D Structure (3)   
   PDB (3)   
Protein domain (6)   
   Pfam (6)   
All databases (88)   

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