KEGG   Homo sapiens (human): 25920
Entry
25920             CDS       T01001                                 
Symbol
NELFB, COBRA1, NELF-B
Name
(RefSeq) negative elongation factor complex member B
  KO
K15180  negative elongation factor B
Organism
hsa  Homo sapiens (human)
Pathway
hsa03250  Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    25920 (NELFB)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:hsa03021]
    25920 (NELFB)
Transcription machinery [BR:hsa03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    NELF complex
     25920 (NELFB)
SSDB
Motif
Pfam: COBRA1 BatA
Other DBs
NCBI-GeneID: 25920
NCBI-ProteinID: NP_056271
OMIM: 611180
HGNC: 24324
Ensembl: ENSG00000188986
UniProt: Q8WX92
Structure
Position
9:137255327..137273542
AA seq 628 aa
MAELEGAGERGSGGPRGPAERASGVSAAAPGERAGDGAPSRAVAGASAMFAGLQDLGVAN
GEDLKETLTNCTEPLKAIEQFQTENGVLLPSLQSALPFLDLHGTPRLEFHQSVFDELRDK
LLERVSAIASEGKAEERYKKLEDLLEKSFSLVKMPSLQPVVMCVMKHLPKVPEKKLKLVM
ADKELYRACAVEVKRQIWQDNQALFGDEVSPLLKQYILEKESALFSTELSVLHNFFSPSP
KTRRQGEVVQRLTRMVGKNVKLYDMVLQFLRTLFLRTRNVHYCTLRAELLMSLHDLDVGE
ICTVDPCHKFTWCLDACIRERFVDSKRARELQGFLDGVKKGQEQVLGDLSMILCDPFAIN
TLALSTVRHLQELVGQETLPRDSPDLLLLLRLLALGQGAWDMIDSQVFKEPKMEVELITR
FLPMLMSFLVDDYTFNVDQKLPAEEKAPVSYPNTLPESFTKFLQEQRMACEVGLYYVLHI
TKQRNKNALLRLLPGLVETFGDLAFGDIFLHLLTGNLALLADEFALEDFCSSLFDGFFLT
ASPRKENVHRHALRLLIHLHPRVAPSKLEALQKALEPTGQSGEAVKELYSQLGEKLEQLD
HRKPSPAQAAETPALELPLPSVPAPAPL
NT seq 1887 nt   +upstreamnt  +downstreamnt
ctggccgagctggagggcgccggggagcggggctcgggcggtccccgaggcccggcggag
cgggcttctggggtgtctgcggcggcgccgggggaacgggctggggatggggcgcctagc
cgggcggtggccggggcctcggccatgttcgcggggctgcaggacctgggcgtggccaac
ggcgaggacctgaaggagaccctgaccaactgcacggagccgctcaaggccatcgagcag
ttccagacagagaatggtgtgctgctgccatctcttcagtcagccctccccttcttggac
ctgcacgggacgccgcggctggagttccaccagtcggtattcgatgagctgcgggacaag
ctgctggagcgagtgtcagccatcgcttcggaggggaaggctgaggaaaggtacaagaag
ctggaagaccttctggagaagagcttttctctggtgaagatgccgtccctgcagcccgtg
gtgatgtgcgtcatgaagcacctgcccaaggttccggagaaaaaactgaagctggttatg
gctgacaaggagctgtatcgagcctgcgccgtggaggtgaagcggcagatctggcaagac
aaccaggccctcttcggggacgaggtttccccactcctgaagcagtacatcctggagaag
gagagcgctctcttcagtacagagctctctgtcctgcacaactttttcagtccttccccc
aagaccaggcgccagggcgaggtggtgcagcggctgacgcggatggtggggaagaacgtg
aagctgtacgacatggtgctgcagtttctgcgcacgctcttcctgcgcacgcggaatgtg
cactactgcacgctgcgggctgagctgctcatgtccctgcacgacctggacgtgggtgaa
atctgcaccgtggacccgtgccacaagttcacctggtgcctggacgcctgcatccgagag
cggttcgtggacagcaagagggcgcgggagctgcaggggtttctcgatggcgtcaagaag
ggccaggagcaggtgctgggggacctgtccatgatcctgtgtgaccccttcgccatcaac
acgctggcactgagcacagtcaggcacctgcaggagctggtcggccaggagacactgccc
agggacagccccgacctcctgctgctgctccggctgctggcgctgggccagggagcctgg
gacatgatcgacagccaggtcttcaaggagcccaagatggaggtagagctcatcaccagg
ttcctcccgatgctcatgtccttcctggtggatgactacactttcaatgtggatcagaaa
cttccggctgaggagaaagccccagtctcatatccaaacacacttcccgaaagcttcact
aagtttctgcaggagcagcgcatggcctgcgaggtggggctgtactacgtcctgcacatc
accaagcagaggaacaagaacgcgctcctccgcctgctgcccgggctggtggagaccttt
ggcgacttggcctttggcgacatcttcctccacctgctcacgggcaaccttgcgctgctg
gccgacgaatttgcccttgaggacttctgcagcagcctcttcgatggcttcttcctcacc
gcctctccaaggaaggagaacgtgcaccggcacgcgctgcggctcctcattcacctgcac
cccagggtggccccgtctaagctggaggcgttgcagaaggccctggagcctacaggccag
agcggagaggcagtgaaggagctttactcccagctcggcgagaagctggaacagctggat
caccggaagcccagcccggcacaggctgcggagacgccggccctggagctgcccctcccc
agcgtgcccgcccctgccccgctctga

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Ontology (2)   
   KEGG BRITE (2)   
Pathway (1)   
   KEGG PATHWAY (1)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (18)   
   KEGG ORTHOLOGY (1)   
   RefGene (5)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (7)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (19)   
   RefSeq(nuc) (1)   
   GenBank (9)   
   EMBL (9)   
3D Structure (4)   
   PDB (4)   
Protein domain (2)   
   Pfam (2)   
All databases (51)   

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