KEGG   Homo sapiens (human): 26046
Entry
26046             CDS       T01001                                 
Symbol
LTN1, C21orf10, C21orf98, RNF160, ZNF294
Name
(RefSeq) listerin E3 ubiquitin protein ligase 1
  KO
K22377  E3 ubiquitin-protein ligase listerin [EC:2.3.2.27]
Organism
hsa  Homo sapiens (human)
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03009 Ribosome biogenesis [BR:hsa03009]
    26046 (LTN1)
   04121 Ubiquitin system [BR:hsa04121]
    26046 (LTN1)
Enzymes [BR:hsa01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     26046 (LTN1)
Ribosome biogenesis [BR:hsa03009]
 Eukaryotic type
  Pre-60S particles
   Ribosome quality control proteins
    26046 (LTN1)
Ubiquitin system [BR:hsa04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    26046 (LTN1)
SSDB
Motif
Pfam: zf-RING_2 FANCL_C zf-ANAPC11 zf-rbx1 RINGv zf-RING-like HipN
Other DBs
NCBI-GeneID: 26046
NCBI-ProteinID: NP_056380
OMIM: 613083
HGNC: 13082
Ensembl: ENSG00000198862
UniProt: O94822
Structure
Position
21:complement(28928144..28992877)
AA seq 1766 aa
MGGKNKQRTKGNLRPSNSGRAAELLAKEQGTVPGFIGFGTSQSDLGYVPAIQGAEEIDSL
VDSDFRMVLRKLSKKDVTTKLKAMQEFGTMCTERDTETVKGVLPYWPRIFCKISLDHDRR
VREATQQAFEKLILKVKKQLAPYLKSLMGYWLMAQCDTYTPAAFAAKDAFEAAFPPSKQP
EAIAFCKDEITSVLQDHLIKETPDTLSDPQTVPEEEREAKFYRVVTCSLLALKRLLCLLP
DNELDSLEEKFKSLLSQNKFWKYGKHSVPQIRSAYFELVSALCQRIPQLMKEEASKVSPS
VLLSIDDSDPIVCPALWEAVLYTLTTIEDCWLHVNAKKSVFPKLSTVIREGGRGLATVIY
PYLLPFISKLPQSITNPKLDFFKNFLTSLVAGLSTERTKTSSLESSAVISAFFECLRFIM
QQNLGEEEIEQMLVNDQLIPFIDAVLKDPGLQHGQLFNHLAETLSSWEAKADTEKDEKTA
HNLENVLIHFWERLSEICVAKISEPEADVESVLGVSNLLQVLQKPKSSLKSSKKKNGKVR
FADEILESNKENEKCVSSEGEKIEGWELTTEPSLTHNSSGLLSPLRKKPLEDLVCKLADI
SINYVNERKSEQHLRFLSTLLDSFSSSRVFKMLLGDEKQSIVQAKPLEIAKLVQKNPAVQ
FLYQKLIGWLNEDQRKDFGFLVDILYSALRCCDNDMERKKVLDDLTKVDLKWNSLLKIIE
KACPSSDKHALVTPWLKGDILGEKLVNLADCLCNEDLESRVSSESHFSERWTLLSLVLSQ
HVKNDYLIGDVYVERIIVRLHETLFKTKKLSEAESSDSSVSFICDVAYNYFSSAKGCLLM
PSSEDLLLTLFQLCAQSKEKTHLPDFLICKLKNTWLSGVNLLVHQTDSSYKESTFLHLSA
LWLKNQVQASSLDINSLQVLLSAVDDLLNTLLESEDSYLMGVYIGSVMPNDSEWEKMRQS
LPMQWLHRPLLEGRLSLNYECFKTDFKEQDIKTLPSHLCTSALLSKMVLIALRKETVLEN
NELEKIIAELLYSLQWCEELDNPPIFLIGFCEILQKMNITYDNLRVLGNTSGLLQLLFNR
SREHGTLWSLIIAKLILSRSISSDEVKPHYKRKESFFPLTEGNLHTIQSLCPFLSKEEKK
EFSAQCIPALLGWTKKDLCSTNGGFGHLAIFNSCLQTKSIDDGELLHGILKIIISWKKEH
EDIFLFSCNLSEASPEVLGVNIEIIRFLSLFLKYCSSPLAESEWDFIMCSMLAWLETTSE
NQALYSIPLVQLFACVSCDLACDLSAFFDSTTLDTIGNLPVNLISEWKEFFSQGIHSLLL
PILVTVTGENKDVSETSFQNAMLKPMCETLTYISKEQLLSHKLPARLVADQKTNLPEYLQ
TLLNTLAPLLLFRARPVQIAVYHMLYKLMPELPQYDQDNLKSYGDEEEEPALSPPAALMS
LLSIQEDLLENVLGCIPVGQIVTIKPLSEDFCYVLGYLLTWKLILTFFKAASSQLRALYS
MYLRKTKSLNKLLYHLFRLMPENPTYAETAVEVPNKDPKTFFTEELQLSIRETTMLPYHI
PHLACSVYHMTLKDLPAMVRLWWNSSEKRVFNIVDRFTSKYVSSVLSFQEISSVQTSTQL
FNGMTVKARATTREVMATYTIEDIVIELIIQLPSNYPLGSIIVESGKRVGVAVQQWRNWM
LQLSTYLTHQNGSIMEGLALWKNNVDKRFEGVEDCMICFSVIHGFNYSLPKKACRTCKKK
FHSACLYKWFTSSNKSTCPLCRETFF
NT seq 5301 nt   +upstreamnt  +downstreamnt
atgggcgggaagaacaagcagcgaactaaagggaacctgaggccttcaaacagtggccga
gctgcagaactccttgccaaagaacagggaacagtgcctggatttattggttttggaaca
tctcagagtgacctaggctatgttcctgctattcaaggagctgaagaaattgacagtctt
gtagattctgatttccgaatggtgctgcggaaactttcaaagaaagatgtcaccacaaaa
ttaaaagctatgcaggaatttggaaccatgtgtacagagagagacacagaaactgtgaaa
ggagttcttccatattggccaagaattttttgcaaaatttcacttgatcatgaccgtcgc
gtccgagaagccacacaacaagcttttgaaaaacttatccttaaagtaaagaaacagttg
gctccctacttaaaaagtttaatgggatattggctaatggctcagtgtgatacttacaca
ccagctgcgtttgcagcaaaagatgcatttgaagcggcttttcctccaagcaagcaacct
gaagccatagcattttgtaaggatgaaattacaagtgtgctgcaggatcatcttataaaa
gaaacacctgatacactcagtgacccgcaaactgttccagaggaagaaagagaagctaaa
ttctaccgggttgtaacttgttccttattggcattaaagagattactttgccttttacct
gataatgagcttgattctctggaggagaaatttaagtctcttttatcacagaataagttt
tggaagtatggaaaacacagtgtacctcagattcgctcagcttattttgagttagtctct
gcattgtgccagcgcattccacagttgatgaaagaggaagcatccaaagtgagcccatca
gttctacttagcattgatgacagtgacccaattgtctgcccagctctctgggaagctgta
ctctatacacttacaactattgaggactgttggcttcatgtaaatgcaaaaaagagtgtg
tttcccaagctatcaactgtgattcgtgaaggtggtcggggtctagctactgtcatatat
ccttaccttctgccattcatcagcaagctccctcagtccatcacaaatccaaagttggat
ttcttcaaaaatttcctcacgtctctagttgctgggctgtcaacagagagaactaaaacc
agctctttagagtcctcggcagtaatatctgctttttttgaatgcttacgttttataatg
cagcaaaacttaggtgaggaagagattgaacagatgctcgtcaatgatcagttgatccct
tttattgatgcagttctcaaagacccaggattgcaacatgggcagctatttaaccattta
gcagaaactctaagttcctgggaagccaaagcagacacggaaaaagatgaaaaaacagct
cacaacttggagaacgtactgatacatttctgggaaagactgtcagagatctgtgttgcg
aaaatcagtgagccagaagctgatgttgagtccgttttgggtgtatctaacctattacag
gtgcttcagaagccgaagagctcattgaagtcaagtaaaaaaaaaaatggtaaggttaga
tttgctgatgagatacttgaaagcaataaagagaatgaaaaatgtgtatcttcagaagga
gagaagattgaaggctgggaattaacaactgaaccttctctcactcataattcttcaggc
cttttgtctcctctaaggaaaaaacctttggaagacttagtctgtaaactcgcagatata
agtattaattatgtcaatgaacgaaagtcagagcaacatctaaggtttctttctactctg
cttgactccttttcttcaagccgagtatttaaaatgctacttggtgatgaaaaacagagt
attgtccaagccaaacctcttgaaatagccaagcttgtacaaaaaaatcctgcggtgcag
tttttataccagaaactgataggttggctaaatgaagatcaaaggaaggattttggtttc
ctggtggacattttgtacagtgctctccggtgctgtgacaatgatatggaaagaaaaaaa
gtcttggatgatctaaccaaggtggacttgaaatggaattctcttcttaagattattgaa
aaggcatgtcctagttcagataaacatgctttagtaactccttggctcaaaggcgatatc
cttggtgagaaattggtcaacttggcagattgtctttgtaatgaggacttggaatccagg
gtatcttcagaatctcacttctcagaaagatggactcttctaagcttggtattatcccaa
catgttaaaaatgattacttgattggagacgtatatgttgaaagaatcattgttagactt
catgaaactttattcaaaacaaagaaattatcagaagctgaaagcagtgactcatcagtg
tcttttatctgtgatgtggcctataactatttcagctcagcgaaaggatgcttgctaatg
ccatcatctgaagatttattattaactctctttcagttatgtgctcagagcaaagaaaaa
acacatttgccagattttcttatctgtaaactgaaaaatacttggctctctggtgtaaat
ttattggttcatcaaactgacagttcatataaagagagtaccttcctacatttgtctgct
ctgtggctgaagaaccaagttcaggcttcatctttggatatcaacagtctccaagtcctc
ttgtctgctgttgatgatttgctaaatacacttctagagagtgaagattcttatcttatg
ggagtttatattggaagtgtaatgccgaacgacagtgaatgggaaaagatgaggcagtct
cttcctatgcagtggttacatagacctcttttagagggaagattgagtttgaattatgaa
tgtttcaaaacagattttaaggaacaggacataaagacacttcccagccatttgtgtact
tcagcattattgagcaaaatggtcttaattgcactgagaaaggaaacagtcttagaaaat
aatgagcttgagaaaataattgcagaactgctttattcactgcagtggtgtgaagaatta
gataacccacctatttttctaattggattttgtgaaatacttcaaaaaatgaatattacg
tatgataacttacgtgtacttggtaatacgtcgggccttttgcagctgttatttaacagg
tccagagaacatggcacactgtggtctcttattattgctaagttgatcctttcccgaagc
atttcatctgatgaagtaaaaccacattataagagaaaagaaagtttttttccactaact
gaaggcaatttgcataccattcaaagtctatgtccatttttgtcaaaagaagaaaagaaa
gaatttagtgctcaatgtatacctgctcttttgggctggactaagaaagatctttgcagc
actaatggaggttttggacatcttgccattttcaattcttgtctgcaaaccaaaagtata
gatgatggagagctattacatggaatattaaaaatcataatatcctggaagaaagagcat
gaagatatttttcttttcagttgtaatctatcagaagcaagtccagaggtactgggtgta
aatatagaaataatccggtttctttccctatttctgaaatactgctcatcccctttggca
gagagtgagtgggacttcatcatgtgctccatgttggcttggttggagacaacaagtgag
aatcaggcattgtattctattccacttgtgcaactgtttgcctgtgtcagctgtgatttg
gcctgtgacctcagtgctttctttgattccacaactctggataccattggcaatcttcct
gtaaatctaatcagtgaatggaaagaatttttttcccaaggcatccacagtttgctttta
cctattttggtgactgttacaggagaaaacaaagatgtgtctgaaacatcctttcagaat
gcaatgctgaaacccatgtgtgaaacattaacgtatatctcaaaggaacagctattgagt
cacaaacttcctgcaagattagttgctgaccaaaaaacaaacttaccagaatatctccag
actttgttaaatacattggccccattactcctcttcagagctaggcctgtgcaaattgct
gtttatcatatgctatacaaattgatgcctgaattaccacagtatgatcaggataatcta
aagtcatacggagatgaagaagaagagccagccttgtcaccaccagcagcactgatgtct
cttcttagcattcaagaggacttactagaaaatgttttggggtgtattcctgttggacag
atagttactattaaaccactgagtgaagacttctgttatgttctgggataccttctcact
tggaaattaatactaactttcttcaaagctgcatcatcacagcttcgggctttgtattcc
atgtatcttcggaaaacaaagagtttgaataaattgctctatcacctgttcaggcttatg
ccagaaaatccaacctatgcagagacagcagttgaggtcccaaataaggaccctaaaaca
ttctttactgaggagctccagctgagtattagagaaacaacaatgcttccataccacatt
ccacacttggcttgttcagtctatcatatgacattaaaagacttgcctgccatggttagg
ttgtggtggaatagcagtgagaagcgtgttttcaatattgtggatagatttacaagcaag
tatgtcagcagtgttctttcttttcaagaaatatcttctgtacaaacaagtacacaacta
tttaatggcatgacggttaaagctcgagctactactcgagaggtaatggctacttatact
attgaggacatagttattgaacttataatacaactgccttcaaattatccactgggttca
ataatagtagaaagtgggaaaagagtaggagtagctgttcagcagtggcggaactggatg
ctgcagttaagcacttacctcacccatcagaatggaagtattatggaaggcttagcttta
tggaaaaataacgtagacaaacgttttgagggtgttgaagattgcatgatctgtttctca
gtcattcacggtttcaactattcccttcccaaaaaagcctgtagaacatgcaagaaaaaa
ttccattcagcctgcttgtacaaatggtttacatctagcaacaaatccacttgtccactg
tgtcgtgagacgtttttctga

  All links  
Ontology (4)   
   KEGG BRITE (4)   
Disease (1)   
   OMIM (1)   
Chemical reaction (1)   
   KEGG ENZYME (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (25)   
   KEGG ORTHOLOGY (1)   
   RefGene (17)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (2)   
   OC (1)   
Protein sequence (16)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (14)   
DNA sequence (60)   
   RefSeq(nuc) (14)   
   GenBank (23)   
   EMBL (23)   
3D Structure (1)   
   PDB (1)   
Protein domain (7)   
   Pfam (7)   
All databases (116)   

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