KEGG   Homo sapiens (human): 27350
Entry
27350             CDS       T01001                                 
Symbol
APOBEC3C, A3C, APOBEC1L, ARDC2, ARDC4, ARP5, PBI, bK150C2.3
Name
(RefSeq) apolipoprotein B mRNA editing enzyme catalytic subunit 3C
  KO
K18750  C->U-editing enzyme APOBEC3 [EC:3.5.4.-]
Organism
hsa  Homo sapiens (human)
Pathway
hsa03250  Viral life cycle - HIV-1
hsa05170  Human immunodeficiency virus 1 infection
Brite
KEGG Orthology (KO) [BR:hsa00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    27350 (APOBEC3C)
 09160 Human Diseases
  09172 Infectious disease: viral
   05170 Human immunodeficiency virus 1 infection
    27350 (APOBEC3C)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:hsa03019]
    27350 (APOBEC3C)
Messenger RNA biogenesis [BR:hsa03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    Common to processing body (P body) and stress granule
     27350 (APOBEC3C)
SSDB
Motif
Pfam: NAD2 APOBEC2 APOBEC_N NAD1 SNAD4 APOBEC3 APOBEC_C APOBEC4_like APOBEC4 APOBEC1 dCMP_cyt_deam_1 Toxin-deaminase
Other DBs
NCBI-GeneID: 27350
NCBI-ProteinID: NP_055323
OMIM: 607750
HGNC: 17353
Ensembl: ENSG00000244509
UniProt: Q9NRW3
Structure
Position
22:39014257..39020352
AA seq 190 aa
MNPQIRNPMKAMYPGTFYFQFKNLWEANDRNETWLCFTVEGIKRRSVVSWKTGVFRNQVD
SETHCHAERCFLSWFCDDILSPNTKYQVTWYTSWSPCPDCAGEVAEFLARHSNVNLTIFT
ARLYYFQYPCYQEGLRSLSQEGVAVEIMDYEDFKYCWENFVYNDNEPFKPWKGLKTNFRL
LKRRLRESLQ
NT seq 573 nt   +upstreamnt  +downstreamnt
atgaatccacagatcagaaacccgatgaaggcaatgtatccaggcacattctacttccaa
tttaaaaacctatgggaagccaacgatcggaacgaaacttggctgtgcttcaccgtggaa
ggtataaagcgccgctcagttgtctcctggaagacgggcgtcttccgaaaccaggtggat
tctgagacccattgtcatgcagaaaggtgcttcctctcttggttctgcgacgacatactg
tctcctaacacaaagtaccaggtcacctggtacacatcttggagcccttgcccagactgt
gcaggggaggtggccgagttcctggccaggcacagcaacgtgaatctcaccatcttcacc
gcccgcctctactacttccagtatccatgttaccaggaggggctccgcagcctgagtcag
gaaggggtcgctgtggagatcatggactatgaagattttaaatattgttgggaaaacttt
gtgtacaatgataatgagccattcaagccttggaagggattaaaaaccaactttcgactt
ctgaaaagaaggctacgggagagtctccagtga

  All links  
Ontology (2)   
   KEGG BRITE (2)   
Pathway (2)   
   KEGG PATHWAY (2)   
Disease (1)   
   OMIM (1)   
Genome (1)   
   KEGG GENOME (1)   
Gene (16)   
   KEGG ORTHOLOGY (1)   
   RefGene (9)   
   NCBI-PROTEINID (1)   
   NCBI-Gene (1)   
   HGNC (1)   
   Ensembl (1)   
   RIKEN BRC-DNA (1)   
   OC (1)   
Protein sequence (3)   
   UniProt (1)   
   SWISS-PROT (1)   
   RefSeq(pep) (1)   
DNA sequence (19)   
   RefSeq(nuc) (1)   
   GenBank (9)   
   EMBL (9)   
3D Structure (2)   
   PDB (2)   
Protein domain (12)   
   Pfam (12)   
All databases (58)   

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